Jatropha Genome Database

JcCB0143751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0143751.20 + phase: 0 
         (135 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g158960.1 Protein of unknown function DUF502 chr04_ps...   117   2e-27
IMGA|Medtr4g159260.1 Protein of unknown function DUF502 chr04_ps...   117   2e-27
IMGA|Medtr4g159280.1 Protein of unknown function DUF502 chr04_ps...   114   1e-26
IMGA|Medtr4g158980.1 Protein of unknown function DUF502 chr04_ps...   114   1e-26
IMGA|Medtr3g144480.1 Protein of unknown function DUF502 chr03_ps...    86   6e-18
IMGA|Medtr4g158980.2 Protein of unknown function DUF502 chr04_ps...    81   2e-16

>IMGA|Medtr4g158960.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40024218-40018123 E
           EGN_Mt090430 20090702
          Length = 265

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 5/95 (5%)

Query: 9   EGDRELLIPVAEIPENAKSKTXXXXXXXXXXXXHRLSGVEALSKVIRSWASKKFMTGCVI 68
           + DRELLIPVA    N+   T            H  SG E  SKV++SWASKKFMTGCVI
Sbjct: 15  DRDRELLIPVA----NSGDDTDASRPLASSSSMHH-SGRETFSKVVQSWASKKFMTGCVI 69

Query: 69  LLPIAVTFYVTWGFVHFVDGFFSPVYNHLGINIFG 103
           LLPIA+TFY+TW F+HFVDGFFSP+Y  LGI+IFG
Sbjct: 70  LLPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFG 104


>IMGA|Medtr4g159260.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40133383-40130836 E
           EGN_Mt090430 20090702
          Length = 204

 Score =  117 bits (292), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 5/95 (5%)

Query: 9   EGDRELLIPVAEIPENAKSKTXXXXXXXXXXXXHRLSGVEALSKVIRSWASKKFMTGCVI 68
           + DRELLIPVA    N+   T            H  SG E  SKV++SWASKKFMTGCVI
Sbjct: 15  DRDRELLIPVA----NSGDDTDASRPLASSSSMHH-SGRETFSKVVQSWASKKFMTGCVI 69

Query: 69  LLPIAVTFYVTWGFVHFVDGFFSPVYNHLGINIFG 103
           LLPIA+TFY+TW F+HFVDGFFSP+Y  LGI+IFG
Sbjct: 70  LLPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFG 104


>IMGA|Medtr4g159280.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40142075-40136404 E
           EGN_Mt090430 20090702
          Length = 270

 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 5/93 (5%)

Query: 11  DRELLIPVAEIPENAKSKTXXXXXXXXXXXXHRLSGVEALSKVIRSWASKKFMTGCVILL 70
           DRELLIPVA    N+   +            H  +G E  SKV++SWASKKFMTGCVIL 
Sbjct: 22  DRELLIPVA----NSGDHSNASKPSSSSSSVHH-AGRETFSKVVQSWASKKFMTGCVILF 76

Query: 71  PIAVTFYVTWGFVHFVDGFFSPVYNHLGINIFG 103
           PIA+TFY+TW F+HFVDGFFSP+Y HLGINIFG
Sbjct: 77  PIAITFYITWWFIHFVDGFFSPIYVHLGINIFG 109


>IMGA|Medtr4g158980.1 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40032813-40027142 E
           EGN_Mt090430 20090702
          Length = 270

 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 5/93 (5%)

Query: 11  DRELLIPVAEIPENAKSKTXXXXXXXXXXXXHRLSGVEALSKVIRSWASKKFMTGCVILL 70
           DRELLIPVA    N+   +            H  +G E  SKV++SWASKKFMTGCVIL 
Sbjct: 22  DRELLIPVA----NSGDHSNASKPSSSSSSVHH-AGRETFSKVVQSWASKKFMTGCVILF 76

Query: 71  PIAVTFYVTWGFVHFVDGFFSPVYNHLGINIFG 103
           PIA+TFY+TW F+HFVDGFFSP+Y HLGINIFG
Sbjct: 77  PIAITFYITWWFIHFVDGFFSPIYVHLGINIFG 109


>IMGA|Medtr3g144480.1 Protein of unknown function DUF502
           chr03_pseudomolecule_IMGAG_V3 37458260-37451390 E
           EGN_Mt090430 20090702
          Length = 258

 Score = 85.9 bits (211), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 44/51 (86%)

Query: 53  VIRSWASKKFMTGCVILLPIAVTFYVTWGFVHFVDGFFSPVYNHLGINIFG 103
           V++SW SKKFMTGCV+L P+AVTF++TW F+ FVDGFFSP+Y+  G+ IFG
Sbjct: 45  VLQSWVSKKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYSSFGVEIFG 95


>IMGA|Medtr4g158980.2 Protein of unknown function DUF502
           chr04_pseudomolecule_IMGAG_V3 40032844-40027142 E
           EGN_Mt090430 20090702
          Length = 202

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 38/41 (92%)

Query: 63  MTGCVILLPIAVTFYVTWGFVHFVDGFFSPVYNHLGINIFG 103
           MTGCVIL PIA+TFY+TW F+HFVDGFFSP+Y HLGINIFG
Sbjct: 1   MTGCVILFPIAITFYITWWFIHFVDGFFSPIYVHLGINIFG 41