Jatropha Genome Database

JcCB0137471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0137471.10 - phase: 0 /partial
         (130 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g010560.1 Cystathionine beta-lyase, related chr07_pse...    90   3e-19
IMGA|Medtr6g013230.1 Cys/Met metabolism pyridoxal-phosphate-depe...    78   1e-15

>IMGA|Medtr7g010560.1 Cystathionine beta-lyase, related
           chr07_pseudomolecule_IMGAG_V3 2308691-2313997 F
           EGN_Mt090430 20090702
          Length = 535

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 7   KIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIVETTKY 65
           ++A+ L AHP+VK+V Y GLP HP  +L   Q  G G V+SF + G +  +   +++ K 
Sbjct: 413 RMAKLLEAHPKVKRVYYPGLPSHPEHELAMRQMTGFGGVVSFEIDGDITTTIKFIDSLKI 472

Query: 66  FSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLDYAL 125
             I  SFG  +S++  P  +S+  +PA+ R    + ++L+R S GIED  DL AD+  AL
Sbjct: 473 PYIAASFGGCESIVDQPAILSYWDLPASERAKWKIYDNLVRFSFGIEDFEDLKADVLQAL 532

Query: 126 R 126
            
Sbjct: 533 E 533


>IMGA|Medtr6g013230.1 Cys/Met metabolism
           pyridoxal-phosphate-dependent enzymes; ;
           chr06_pseudomolecule_IMGAG_V3 2746264-2752471 E
           EGN_Mt090430 20090702
          Length = 477

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 4   NAQKIAEFLAAHPQVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSF-LTGSLALSKHIVET 62
            A K+A+ L  HP+V +V Y GLP HP   L   Q  G G V+ F + G +  +   V++
Sbjct: 352 TAMKMAQLLETHPKVTRVYYPGLPSHPEYALAKRQMTGFGGVVCFDIDGDIMRTIKFVDS 411

Query: 63  TKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLIRISVGIEDVNDLIADLD 122
            K   I  SFG V+S+++ P  MS+  +P   RE   + ++ +R   G+E   DL  D+ 
Sbjct: 412 LKIPYIAPSFGGVESVVNQPAIMSYWDLPRKEREKYRIYDNTVRFCFGVEGYEDLKDDVL 471

Query: 123 YAL 125
            AL
Sbjct: 472 QAL 474