Jatropha Genome Database

JcCB0136381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0136381.10 - phase: 0 /partial
         (328 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g059590.1 Sucrose phosphatase, plant and cyanobacteri...   335   2e-92

>IMGA|Medtr1g059590.1 Sucrose phosphatase, plant and cyanobacteria
           chr01_pseudomolecule_IMGAG_V3 11667375-11670944 F
           EGN_Mt090430 20090702
          Length = 321

 Score =  335 bits (860), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 159/223 (71%), Positives = 187/223 (83%)

Query: 1   MDRLKAPARLMIVSDLDHTMVDHHDPENMSLLRFNALWEAHYRHDSLLVFSTGRSPTLYK 60
           MDRL   A LMIVSDLD+TMVDH DPEN++LLRFNALWEA+YRH+SLLVFSTGRSPT+YK
Sbjct: 1   MDRLIGSANLMIVSDLDYTMVDHDDPENLALLRFNALWEAYYRHNSLLVFSTGRSPTIYK 60

Query: 61  QLRKEKPMLTPDITIMSVGTEITYGNKMVPDNGWVEILNQKWDKNIVTEEASKFPELNLQ 120
           +LRK+KP+LTPDITIMSVGTEITYG  MVPD+GW + L+ KWD++IV EE +KFPEL  Q
Sbjct: 61  ELRKQKPLLTPDITIMSVGTEITYGESMVPDDGWKQYLDHKWDRDIVIEETAKFPELVSQ 120

Query: 121 SETELRPHKVSFYVDKDKAQTVIKALSEIFQKRGLDVKIIYSGGMDLDILPRGAGKGQAL 180
           SETE RPHKVSF ++K KA  V++ALS+  + RGLDVKIIYS  + LD+LP+ AGKGQAL
Sbjct: 121 SETEQRPHKVSFNLEKGKASKVMQALSKCLENRGLDVKIIYSNSIALDVLPQAAGKGQAL 180

Query: 181 AYLHKKFKTEGKLPNKTLVCGDSGNDAELFSIPDVYGVMPGNA 223
           ++L  K K  G  P  TLVCGDSGNDAELFS+P+VYGVM GNA
Sbjct: 181 SFLLGKLKAGGIRPLNTLVCGDSGNDAELFSVPEVYGVMVGNA 223