Jatropha Genome Database

JcCB0133481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133481.10 - phase: 0 
         (251 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g096530.1 Protein of unknown function DUF573 chr01_ps...    52   2e-07
IMGA|Medtr1g096510.1 Protein of unknown function DUF573 chr01_ps...    52   2e-07
IMGA|Medtr7g140470.1 Protein of unknown function DUF573 chr07_ps...    52   3e-07

>IMGA|Medtr1g096530.1 Protein of unknown function DUF573
           chr01_pseudomolecule_IMGAG_V3 19763623-19764929 E
           EGN_Mt090430 20090702
          Length = 371

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 13/110 (11%)

Query: 69  RLWNNEDETVLLSAMI--NLGIKSGDSNNVDRLYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           R+W  EDE  +L   +  N   +S   N+    YDH+   +     +KSQL +K+ RL+K
Sbjct: 99  RIWTEEDEITILQGFLDYNANRESSYHNDTGSFYDHMKGKIQLD-FTKSQLVDKLRRLKK 157

Query: 127 KYKKNLVR--GGRD-SLSGKHEIELFDLCHQLWEKSSQILAITAISAPAG 173
           KY+  L +   G+D      H+   F++ H++W        I   S P G
Sbjct: 158 KYRTALQKFDSGKDFGFKSTHDQAAFEISHKIWN-------INGNSTPIG 200


>IMGA|Medtr1g096510.1 Protein of unknown function DUF573
           chr01_pseudomolecule_IMGAG_V3 19760762-19759635 H
           EGN_Mt090430 20090702
          Length = 375

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 65  KQSNRLWNNEDETVLLSAMINLGIKSGDSN-----NVDRLYDHVIKDLHCTTVSKSQLTE 119
           KQ  RLW  +DE  LL   ++   + G +N      V   YD VI        +++QL E
Sbjct: 130 KQYQRLWTKQDEIELLKGYLDYIKQQGRANTTIQSGVASFYDQVIPKF-SVEFNRNQLVE 188

Query: 120 KVHRLRKKYKKNLVRGGRDSLSGK--HEIELFDLCHQLW 156
           K+ RL++K+K  L +G    +S K   E  +F++ H++W
Sbjct: 189 KLRRLKRKHKMTLDKGKEVQISFKIPQEQAIFEISHKIW 227


>IMGA|Medtr7g140470.1 Protein of unknown function DUF573
           chr07_pseudomolecule_IMGAG_V3 33839729-33837933 E
           EGN_Mt090430 20090702
          Length = 441

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 69  RLWNNEDETVLLSAMINLGIKSGDS--NNVDRLYDHVIKDLHCTTVSKSQLTEKVHRLRK 126
           RLW +EDE  LL   ++   + G S  N+  + YD +   L     +K+QL EK+ RL+K
Sbjct: 113 RLWTDEDEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLD-FNKNQLVEKIRRLKK 171

Query: 127 KYK---KNLVRGGRDSLSGKHEIELFDLCHQLWEKSSQILAITAI 168
           KY+     +  G        H+   F++  ++W   + I    AI
Sbjct: 172 KYRNVVSKMSSGKEFVFKTAHDQATFEISRKIWNNVAPIAGDIAI 216