Jatropha Genome Database

JcCB0133321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133321.10 - phase: 0 
         (178 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g121260.1 Anthranilate synthase component II/delta cr...    64   4e-11

>IMGA|Medtr1g121260.1 Anthranilate synthase component II/delta
           crystallin chr01_pseudomolecule_IMGAG_V3
           26378625-26386984 E EGN_Mt090430 20090702
          Length = 380

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 93/232 (40%), Gaps = 80/232 (34%)

Query: 10  VYRNDELTVEEL-----KRKNPRGVLISPGPGPP---QDSGISLQTVLELGPLVPLFGEC 61
           V +ND+ T EEL     +      +++SPGPG P   +D GI LQ + E    +P+ G C
Sbjct: 25  VIQNDDWTWEELCYYLYEENAFDNIVLSPGPGSPACPEDIGICLQILRECRD-IPILGVC 83

Query: 62  MGLQWKIVRSPYGVVHGK-----SSPVY--YDEKGEDG--LF----SGLENPFTAGRYHS 108
           +G Q        G VHG      S PV+    E   +G  LF    SG  + F   RYHS
Sbjct: 84  LGHQ------ALGYVHGAQVVHASEPVHGRLSEVEHNGCQLFQGIPSGRNSGFKVVRYHS 137

Query: 109 LVIEKDSFPSEELEITAWTE----------------------------DGL--------- 131
           LVI+ +S P E L   AWT                             D L         
Sbjct: 138 LVIDSESLP-EVLIPIAWTSSRTLPFIGSEVLDKYNGHELQTDQSIFLDSLLPEAGNGSS 196

Query: 132 -------------IMAARHKKYKHLQGVQFHPESIITSEGKSIVRNFVKMIE 170
                        +M  +H    H  GVQFHPES+ T  G  I +NF ++ +
Sbjct: 197 SLVEYGQTRNARVLMGVKHSTRPHY-GVQFHPESVATCHGSQIFKNFREITD 247