Jatropha Genome Database

JcCB0133181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133181.10 - phase: 0 /partial
         (271 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g104310.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3...   293   5e-80
IMGA|Medtr3g104310.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...   292   1e-79
IMGA|Medtr3g104320.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3...   211   2e-55
IMGA|Medtr1g096350.1 Amine oxidase chr01_pseudomolecule_IMGAG_V3...   144   7e-35
IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3...    52   4e-07

>IMGA|Medtr3g104310.2 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           25881950-25879140 E EGN_Mt090430 20090702
          Length = 170

 Score =  293 bits (751), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 138/149 (92%), Positives = 144/149 (96%)

Query: 118 FDRKLKNAYDHLLFSRSSLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDSEII 177
           FDRKLKN YDHLLFSRS LLSVYADMSVTCKEYY+PNQSMLELVFAPAEEWISRSD +II
Sbjct: 5   FDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDEDII 64

Query: 178 NATMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLA 237
            ATM ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRPLQRSP+EGFYLA
Sbjct: 65  GATMSELAKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLA 124

Query: 238 GDYTKQKYLASMEGAVLSGKLCAQAIVQV 266
           GDYTKQKYLASMEGAVLSGKLCAQAIVQV
Sbjct: 125 GDYTKQKYLASMEGAVLSGKLCAQAIVQV 153


>IMGA|Medtr3g104310.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           25881950-25879140 E EGN_Mt090430 20090702
          Length = 171

 Score =  292 bits (748), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 137/148 (92%), Positives = 143/148 (96%)

Query: 118 FDRKLKNAYDHLLFSRSSLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDSEII 177
           FDRKLKN YDHLLFSRS LLSVYADMSVTCKEYY+PNQSMLELVFAPAEEWISRSD +II
Sbjct: 5   FDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISRSDEDII 64

Query: 178 NATMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLA 237
            ATM ELAKLFPDEI+ADQSKAKI+KYHVVKTPRSVYKT+PNCEPCRPLQRSP+EGFYLA
Sbjct: 65  GATMSELAKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLA 124

Query: 238 GDYTKQKYLASMEGAVLSGKLCAQAIVQ 265
           GDYTKQKYLASMEGAVLSGKLCAQAIVQ
Sbjct: 125 GDYTKQKYLASMEGAVLSGKLCAQAIVQ 152


>IMGA|Medtr3g104320.1 Amine oxidase chr03_pseudomolecule_IMGAG_V3
           25891208-25885191 E EGN_Mt090430 20090702
          Length = 415

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 98/117 (83%), Positives = 106/117 (90%)

Query: 1   CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGT 60
           CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEV LNSRIK +ELN+D T
Sbjct: 299 CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIKNIELNDDNT 358

Query: 61  VRSFLLNTGDVIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVINVHIW 117
           V+SFLL  G VIE DAYV A PVDILKLLLP++WK +PYF +L+KLVGVPVINVHIW
Sbjct: 359 VKSFLLTNGKVIEGDAYVSAAPVDILKLLLPENWKGVPYFQRLDKLVGVPVINVHIW 415


>IMGA|Medtr1g096350.1 Amine oxidase chr01_pseudomolecule_IMGAG_V3
           19696555-19691039 E EGN_Mt090430 20090702
          Length = 579

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 150/286 (52%), Gaps = 28/286 (9%)

Query: 1   CILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVRLNSRIKKV--ELNND 58
           C+L     F  +   S +  L G+P   L  PI  +I   GG   L    ++V  + + D
Sbjct: 265 CMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDRGGRFHLRWGCREVLYDKSAD 324

Query: 59  GTVRSFLLNTGD-----VIEADAYVFATPVDILKLLLPDSWKEIPYFNKLEKLVGVPVIN 113
           G+     L+        ++EADAYV A  V  +K LLP  W+E  +FN + +LVGVPV+ 
Sbjct: 325 GSTYVTGLSLSKATEKKIVEADAYVAACDVPGIKRLLPSEWREKEFFNNIYELVGVPVVT 384

Query: 114 VHIWFD------------RKLKNA--YDHLLFSRSSLLSVYADMSVTCKE-YYSPNQ-SM 157
           V + ++            R+LK A   D+LL++  +  S +AD+++   E YY   Q S+
Sbjct: 385 VQLRYNGWVTELQNLELSRQLKKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSL 444

Query: 158 LELVFAPAEEWISRSDSEIINATMKELAKLFPDEIAADQSKAKILKYHVVKTPRSVYKTI 217
           L+ V  P + ++   + EII+   K++  LFP     + + +      VVK  +S+Y+  
Sbjct: 445 LQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSS-----VVKIGQSLYREG 499

Query: 218 PNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 263
           P  +P RP Q++PV+ F+L+G YTKQ Y+ SMEGA LSG+  +  I
Sbjct: 500 PGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYI 545


>IMGA|Medtr5g097430.1 Amine oxidase chr05_pseudomolecule_IMGAG_V3
           38819227-38814231 F EGN_Mt090430 20090702
          Length = 488

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 49/257 (19%)

Query: 28  RLCMPIVDHIQSLGGEVRLNSRIKKVELNNDGTVRSFLLNTGDVIEADAYVFATPVDILK 87
           R  +P++ H  + G ++RL  R  K+    +G         G    ADA + A P+ +LK
Sbjct: 225 RGYLPVI-HTLAKGLDIRLGHRATKIVRGYNGV--KVTTENGKTFVADAAIIAVPLGVLK 281

Query: 88  L-------LLPDSWKEIPYFNKLEKLVGVPVINVHIWFDRKLKNAYDHLLFSRSSLLSVY 140
                    LPD WKE              + ++ +  + K+   + ++ +     L V 
Sbjct: 282 ANVIKFEPKLPD-WKE------------AAIADIGVGVENKIILHFKNVFWPNVEFLGVV 328

Query: 141 ADMSVTCKEYYSPNQSMLE--LVFAPA----EEWISRSDSEIINATMKELAKLFPD---- 190
           A+ S  C  + + +++     LV+ PA    ++    SD    +    +L K+ PD    
Sbjct: 329 AETSYGCSYFLNLHKAAGHPVLVYMPAGRLAKDIEKMSDEAAADFAFTQLKKILPDASSP 388

Query: 191 ------EIAADQSKAKILKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQK 244
                     D +      +  V  P  +Y+ +          R PV+  + AG+ T   
Sbjct: 389 IQYLVSRWGTDINSLGSYSFDAVGKPHGLYERL----------RVPVDNLFFAGEATSVL 438

Query: 245 YLASMEGAVLSGKLCAQ 261
           Y  S+ GA  +G + A+
Sbjct: 439 YTGSVHGAYSTGTMAAE 455