Jatropha Genome Database

JcCB0131141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0131141.10 + phase: 0 /pseudo
         (202 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g163220.2 Purine and other phosphorylases, family 1 c...   223   3e-59
IMGA|Medtr3g163220.1 Purine and other phosphorylases, family 1 c...   203   6e-53
IMGA|Medtr1g120460.1 Ribosomal protein L4/L1e chr01_pseudomolecu...    52   1e-07

>IMGA|Medtr3g163220.2 Purine and other phosphorylases, family 1
           chr03_pseudomolecule_IMGAG_V3 42868829-42872941 E
           EGN_Mt090430 20090702
          Length = 261

 Score =  223 bits (569), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 100/151 (66%), Positives = 125/151 (82%)

Query: 20  EQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPWVWYHGVYNDLNINLVWPGK 79
           +++PISNI+++IAMQTEA PVVNKF+L ED ++ FP+GVPWV YHG +  LN+NL+WPGK
Sbjct: 16  DEKPISNIVIVIAMQTEAQPVVNKFELIEDPNSPFPEGVPWVRYHGKFKGLNLNLIWPGK 75

Query: 80  DPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXXXXXSIGDVYLASDVAFHDR 139
           DP  GVDSVGT+S++L+TYAAIQ+ +PDLIIN            S+GD+++ASD AFHDR
Sbjct: 76  DPSSGVDSVGTISSALVTYAAIQSFKPDLIINAGTAGGFKARGASVGDIFIASDCAFHDR 135

Query: 140 RIPIPVFDLYGVGLRKAYSTPNLLKELNLKV 170
           RIPIPVFDLYGVG RKA+ TPNL+KELNLKV
Sbjct: 136 RIPIPVFDLYGVGSRKAFETPNLVKELNLKV 166


>IMGA|Medtr3g163220.1 Purine and other phosphorylases, family 1
           chr03_pseudomolecule_IMGAG_V3 42868829-42872941 E
           EGN_Mt090430 20090702
          Length = 296

 Score =  203 bits (516), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 100/186 (53%), Positives = 125/186 (67%), Gaps = 35/186 (18%)

Query: 20  EQRPISNILLIIAMQTEAMPVVNKFQLEEDQHAAFPKGVPWVWYHGVYNDLNINLVWPGK 79
           +++PISNI+++IAMQTEA PVVNKF+L ED ++ FP+GVPWV YHG +  LN+NL+WPGK
Sbjct: 16  DEKPISNIVIVIAMQTEAQPVVNKFELIEDPNSPFPEGVPWVRYHGKFKGLNLNLIWPGK 75

Query: 80  DPILGVDSVGTVSASLLTYAAIQALQPDLIINXXXXXXXXXXXXSIGDVYLASDVAFHDR 139
           DP  GVDSVGT+S++L+TYAAIQ+ +PDLIIN            S+GD+++ASD AFHDR
Sbjct: 76  DPSSGVDSVGTISSALVTYAAIQSFKPDLIINAGTAGGFKARGASVGDIFIASDCAFHDR 135

Query: 140 RIPIPV-----------------------------------FDLYGVGLRKAYSTPNLLK 164
           RIPIPV                                   FDLYGVG RKA+ TPNL+K
Sbjct: 136 RIPIPVSQTVLSLMESHYIYFVEGSFVCFWFFFFLYFFLPVFDLYGVGSRKAFETPNLVK 195

Query: 165 ELNLKV 170
           ELNLKV
Sbjct: 196 ELNLKV 201


>IMGA|Medtr1g120460.1 Ribosomal protein L4/L1e
           chr01_pseudomolecule_IMGAG_V3 25920548-25921295 E
           EGN_Mt090430 20090702
          Length = 194

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 56  KGVPWVWYHGVYNDLNINLVWPGKDPILGVDSVGTVSASLLT 97
           +GVPWV YHG +  LN+NL+ PGKDP  GVD+   +  SL+T
Sbjct: 75  EGVPWVRYHGKFKGLNLNLICPGKDPSSGVDTASAI-PSLVT 115