Jatropha Genome Database

JcCB0130751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130751.20 + phase: 0 /partial
         (155 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g086620.1 Phenazine biosynthesis PhzC/PhzF protein ch...   159   4e-40
IMGA|Medtr1g086620.2 Phenazine biosynthesis PhzC/PhzF protein ch...   159   5e-40
IMGA|Medtr1g086630.1 Phenazine biosynthesis PhzC/PhzF protein ch...   156   4e-39
IMGA|Medtr1g086600.1 Phenazine biosynthesis PhzC/PhzF protein ch...   150   2e-37
IMGA|Medtr5g078520.1 Phenazine biosynthesis PhzC/PhzF protein ch...    48   2e-06
IMGA|Medtr5g078560.1 hypothetical protein chr05_pseudomolecule_I...    47   3e-06

>IMGA|Medtr1g086620.1 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17192491-17190064 E
           EGN_Mt090430 20090702
          Length = 338

 Score =  159 bits (403), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 4/133 (3%)

Query: 18  FALNRYFYTLYRYESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSE 77
           F L   F      +  + +Y VDAFTDSAF GNPAAVCLLE++K+++WLQ+VA EFN+SE
Sbjct: 35  FYLQHLFPHHQMAKKHVKYYVVDAFTDSAFKGNPAAVCLLEEDKDDEWLQSVAAEFNISE 94

Query: 78  TCYLTRITDGETVSSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTL 137
           TCYLT I      +S PRF LRWFTPV E+ LCGHATLAA+H LFS+G V+ + IEFVTL
Sbjct: 95  TCYLTSIHG----TSIPRFGLRWFTPVVEVNLCGHATLAAAHTLFSSGLVDKNVIEFVTL 150

Query: 138 SGFLIAKKVTEIS 150
           SG L  +K+  + 
Sbjct: 151 SGVLTVRKIPSMD 163


>IMGA|Medtr1g086620.2 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17192491-17189954 E
           EGN_Mt090430 20090702
          Length = 278

 Score =  159 bits (403), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 4/133 (3%)

Query: 18  FALNRYFYTLYRYESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSE 77
           F L   F      +  + +Y VDAFTDSAF GNPAAVCLLE++K+++WLQ+VA EFN+SE
Sbjct: 35  FYLQHLFPHHQMAKKHVKYYVVDAFTDSAFKGNPAAVCLLEEDKDDEWLQSVAAEFNISE 94

Query: 78  TCYLTRITDGETVSSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTL 137
           TCYLT I      +S PRF LRWFTPV E+ LCGHATLAA+H LFS+G V+ + IEFVTL
Sbjct: 95  TCYLTSIHG----TSIPRFGLRWFTPVVEVNLCGHATLAAAHTLFSSGLVDKNVIEFVTL 150

Query: 138 SGFLIAKKVTEIS 150
           SG L  +K+  + 
Sbjct: 151 SGVLTVRKIPSMD 163


>IMGA|Medtr1g086630.1 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17195896-17192825 E
           EGN_Mt090430 20090702
          Length = 292

 Score =  156 bits (395), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 90/115 (78%), Gaps = 4/115 (3%)

Query: 31  ESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETV 90
           +  + +Y VDAFTDSAF GNPAAVCLLE++K+++WLQ VA EFN+SETCYLT I      
Sbjct: 3   KKPVKYYVVDAFTDSAFKGNPAAVCLLEEDKDDEWLQLVAAEFNISETCYLTPIHG---- 58

Query: 91  SSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWVNSSTIEFVTLSGFLIAKK 145
           +S PRF LRWFTPVAE+ LCGHATLAA+H L S+G V+ + IEFVT SG L AK+
Sbjct: 59  TSIPRFGLRWFTPVAEVNLCGHATLAAAHTLLSSGLVDKNAIEFVTRSGILTAKR 113


>IMGA|Medtr1g086600.1 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17184873-17182735 E
           EGN_Mt090430 20090702
          Length = 299

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/126 (56%), Positives = 93/126 (73%), Gaps = 5/126 (3%)

Query: 31  ESSLSFYQVDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNLSETCYLTRITDGETV 90
           E  + +Y VDAFT+ AF GNPAAVCLL+ EK+++WLQ +A EFN++ TCYL  +      
Sbjct: 5   EKPVKYYVVDAFTELAFKGNPAAVCLLDQEKDDEWLQVLAAEFNINVTCYLIPVKG---- 60

Query: 91  SSNPRFHLRWFTPVAEIRLCGHATLAASHILFSNGWV-NSSTIEFVTLSGFLIAKKVTEI 149
           ++NPRF LRWFTP+ E+ +C HATLAASH LF++G V N+ TIEFVTLSG L AKK++ I
Sbjct: 61  TTNPRFRLRWFTPIVEVNICAHATLAASHALFASGLVDNNVTIEFVTLSGMLTAKKISAI 120

Query: 150 SNREAK 155
           +    K
Sbjct: 121 NGTSDK 126


>IMGA|Medtr5g078520.1 Phenazine biosynthesis PhzC/PhzF protein
          chr05_pseudomolecule_IMGAG_V3 29110161-29110753 E
          EGN_Mt090430 20090702
          Length = 51

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 39 VDAFTDSAFMGNPAAVCLLEDEKNEKWLQAVATEFNL 75
          VD FT SAF GNPAAVCLLE   NE+ LQ++  EFN+
Sbjct: 15 VDMFTVSAFKGNPAAVCLLEVRGNER-LQSLTAEFNI 50


>IMGA|Medtr5g078560.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 29118267-29119424 E
           EGN_Mt090430 20090702
          Length = 83

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 66  LQAVATEFNLSETCYLTRITDGETVSSNPRFHLRWFTPVAEI 107
           LQ+++ EFN+SETCYLT        + NPRF LRWFT V E+
Sbjct: 16  LQSLSAEFNISETCYLTYPIH---RAFNPRFGLRWFTHVTEL 54