Jatropha Genome Database

JcCB0130751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0130751.10 + phase: 2 /pseudo/partial
         (272 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g086630.1 Phenazine biosynthesis PhzC/PhzF protein ch...   304   3e-83
IMGA|Medtr1g086620.1 Phenazine biosynthesis PhzC/PhzF protein ch...   303   6e-83
IMGA|Medtr1g086600.1 Phenazine biosynthesis PhzC/PhzF protein ch...   303   7e-83
IMGA|Medtr1g086620.2 Phenazine biosynthesis PhzC/PhzF protein ch...   194   3e-50
IMGA|Medtr1g086620.3 hypothetical protein chr01_pseudomolecule_I...    63   2e-10

>IMGA|Medtr1g086630.1 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17195896-17192825 E
           EGN_Mt090430 20090702
          Length = 292

 Score =  304 bits (778), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 146/221 (66%), Positives = 173/221 (78%), Gaps = 5/221 (2%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETS-----NDKSKEGF 111
           + ++ LC HATLAA+HTL S+ LV+ N IEF T SGILTAK+   TS     N ++  GF
Sbjct: 72  VAEVNLCGHATLAAAHTLLSSGLVDKNAIEFVTRSGILTAKRTDVTSALNLQNGEAPVGF 131

Query: 112 LIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELEPQF 171
            IELDFP  P  EFNS D + IS ALNGASIIDIKRT   D+L ++V S + VTE++PQF
Sbjct: 132 YIELDFPADPIAEFNSNDTSLISGALNGASIIDIKRTTNGDNLLVLVTSGENVTEVQPQF 191

Query: 172 DEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKLGKC 231
           D ++K PG G+IVTG+AP +SGFDFYSR+FCPK G+NEDPVCGSAHC +APYWSKKLGKC
Sbjct: 192 DAIVKCPGMGIIVTGIAPPESGFDFYSRYFCPKHGINEDPVCGSAHCGLAPYWSKKLGKC 251

Query: 232 DFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           D  AYQASARGGIL+IH DEQKQRV LRGKAV+VMEG + V
Sbjct: 252 DLKAYQASARGGILNIHIDEQKQRVFLRGKAVTVMEGSVLV 292


>IMGA|Medtr1g086620.1 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17192491-17190064 E
           EGN_Mt090430 20090702
          Length = 338

 Score =  303 bits (776), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 143/224 (63%), Positives = 172/224 (76%), Gaps = 10/224 (4%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETS--------NDKSK 108
           + ++ LC HATLAA+HTLFS+ LV+ N+IEF TLSG+LT +KIP           N ++ 
Sbjct: 117 VVEVNLCGHATLAAAHTLFSSGLVDKNVIEFVTLSGVLTVRKIPSMDVTGVPNLLNSEAA 176

Query: 109 EGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELE 168
            GF IE+DFP  P  EFNS D + IS+A NGASIIDIK+T   +DL +VV S K VTE++
Sbjct: 177 AGFYIEMDFPAYPVAEFNSDDTSLISEATNGASIIDIKKTG--EDLLVVVASGKNVTEIQ 234

Query: 169 PQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSKKL 228
           PQ D + KLPGRGLIVTG+AP +SGFDFYSRFF PK G+NEDPVCGSAHC +A YWSKKL
Sbjct: 235 PQLDAIAKLPGRGLIVTGIAPPESGFDFYSRFFAPKFGINEDPVCGSAHCGLASYWSKKL 294

Query: 229 GKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
            KCD  AYQAS RGG+L+IH DEQKQRV LRGKA++VMEGC+ V
Sbjct: 295 EKCDLKAYQASTRGGVLNIHIDEQKQRVFLRGKAITVMEGCVLV 338


>IMGA|Medtr1g086600.1 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17184873-17182735 E
           EGN_Mt090430 20090702
          Length = 299

 Score =  303 bits (775), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 148/226 (65%), Positives = 176/226 (77%), Gaps = 10/226 (4%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNI-IEFATLSGILTAKKIPETS---------NDK 106
           + ++ +CAHATLAASH LF++ LV++N+ IEF TLSG+LTAKKI   +         N K
Sbjct: 74  IVEVNICAHATLAASHALFASGLVDNNVTIEFVTLSGMLTAKKISAINGTSDKKNLQNGK 133

Query: 107 SKEGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTE 166
           +K+   IELDFP  P  EF   D   IS+AL+GASIIDIKRT + DDL +VV S K V E
Sbjct: 134 AKDVSYIELDFPADPITEFKFDDTWLISQALDGASIIDIKRTQIQDDLLVVVTSGKNVIE 193

Query: 167 LEPQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNEDPVCGSAHCSIAPYWSK 226
           ++PQFD ++K PGRG+IVTG+AP +SGFDFYSRFFCPK GVNEDPVCGSAHC +A YWSK
Sbjct: 194 VQPQFDAIVKSPGRGIIVTGIAPPESGFDFYSRFFCPKFGVNEDPVCGSAHCGLASYWSK 253

Query: 227 KLGKCDFMAYQASARGGILDIHFDEQKQRVLLRGKAVSVMEGCLFV 272
           KLGKCD  AYQASARGGIL+IH DEQKQRV LRGKAV+VMEGC+ V
Sbjct: 254 KLGKCDLKAYQASARGGILNIHIDEQKQRVFLRGKAVTVMEGCVLV 299


>IMGA|Medtr1g086620.2 Phenazine biosynthesis PhzC/PhzF protein
           chr01_pseudomolecule_IMGAG_V3 17192491-17189954 E
           EGN_Mt090430 20090702
          Length = 278

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/161 (59%), Positives = 118/161 (73%), Gaps = 10/161 (6%)

Query: 57  MTQIKLCAHATLAASHTLFSNNLVNSNIIEFATLSGILTAKKIPETS--------NDKSK 108
           + ++ LC HATLAA+HTLFS+ LV+ N+IEF TLSG+LT +KIP           N ++ 
Sbjct: 117 VVEVNLCGHATLAAAHTLFSSGLVDKNVIEFVTLSGVLTVRKIPSMDVTGVPNLLNSEAA 176

Query: 109 EGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIVVPSAKVVTELE 168
            GF IE+DFP  P  EFNS D + IS+A NGASIIDIK+T   +DL +VV S K VTE++
Sbjct: 177 AGFYIEMDFPAYPVAEFNSDDTSLISEATNGASIIDIKKTG--EDLLVVVASGKNVTEIQ 234

Query: 169 PQFDEVLKLPGRGLIVTGVAPSDSGFDFYSRFFCPKMGVNE 209
           PQ D + KLPGRGLIVTG+AP +SGFDFYSRFF PK G+NE
Sbjct: 235 PQLDAIAKLPGRGLIVTGIAPPESGFDFYSRFFAPKFGINE 275


>IMGA|Medtr1g086620.3 hypothetical protein
           chr01_pseudomolecule_IMGAG_V3 17192006-17190994 E
           EGN_Mt090430 20090702
          Length = 63

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 99  IPETSNDKSKEGFLIELDFPVVPTIEFNSVDLAPISKALNGASIIDIKRTAVSDDLFIV 157
           +P   N ++  GF IE+DFP  P  EFNS D + IS+A NGASIIDIK+T   +DL ++
Sbjct: 6   VPNLLNSEAAAGFYIEMDFPAYPVAEFNSDDTSLISEATNGASIIDIKKTG--EDLLVI 62