Jatropha Genome Database
- JcCB0130701.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0130701.20 + phase: 0 /partial
(279 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g149330.2 Peptidase C48, SUMO/Sentrin/Ubl1 chr03_pseu... 84 8e-17
IMGA|Medtr3g149330.1 Peptidase C48, SUMO/Sentrin/Ubl1 chr03_pseu... 84 8e-17
IMGA|Medtr5g075220.1 Peptidase C48, SUMO/Sentrin/Ubl1 chr05_pseu... 81 6e-16
IMGA|Medtr5g075230.1 Peptidase C48, SUMO/Sentrin/Ubl1 chr05_pseu... 62 3e-10
IMGA|Medtr2g009590.1 Peptidase C48, SUMO/Sentrin/Ubl1 chr02_pseu... 58 5e-09
>IMGA|Medtr3g149330.2 Peptidase C48, SUMO/Sentrin/Ubl1
chr03_pseudomolecule_IMGAG_V3 39031900-39018891 E
EGN_Mt090430 20090702
Length = 1017
Score = 84.0 bits (206), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 15/157 (9%)
Query: 133 KAPFKGKVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGE------SSESKARTPCM 186
KA F+ +V W ++ +F K Y+ +P+ HWSL++ CH GE ++ + PC+
Sbjct: 472 KAAFQ-RVRKWTRKVNLFEKDYIFIPVNFNLHWSLIVICHPGEVINNDKELDNALKVPCI 530
Query: 187 LLLDSLAVADPRRLEPDIRKFVFDIYRS---EGRSENRKLIYQIPLFLP-KVPQQRNGEE 242
L +DS+ + L+ ++ ++++ ++ E E+ ++ FLP +PQQ N +
Sbjct: 531 LHMDSIK-GNHSGLKNLLQSYLWEEWKERHKEASEEDFSALFSNLRFLPLALPQQENSYD 589
Query: 243 CGKYVLHFINLFVLGAP---DDFSIKNYPYFMNQNWF 276
CG ++LH++ LF+ AP + F + + F+N +WF
Sbjct: 590 CGLFLLHYLELFLAEAPLTFNPFKVTKFSNFLNVDWF 626
>IMGA|Medtr3g149330.1 Peptidase C48, SUMO/Sentrin/Ubl1
chr03_pseudomolecule_IMGAG_V3 39031900-39018891 E
EGN_Mt090430 20090702
Length = 1020
Score = 84.0 bits (206), Expect = 8e-17, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 15/157 (9%)
Query: 133 KAPFKGKVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGE------SSESKARTPCM 186
KA F+ +V W ++ +F K Y+ +P+ HWSL++ CH GE ++ + PC+
Sbjct: 475 KAAFQ-RVRKWTRKVNLFEKDYIFIPVNFNLHWSLIVICHPGEVINNDKELDNALKVPCI 533
Query: 187 LLLDSLAVADPRRLEPDIRKFVFDIYRS---EGRSENRKLIYQIPLFLP-KVPQQRNGEE 242
L +DS+ + L+ ++ ++++ ++ E E+ ++ FLP +PQQ N +
Sbjct: 534 LHMDSIK-GNHSGLKNLLQSYLWEEWKERHKEASEEDFSALFSNLRFLPLALPQQENSYD 592
Query: 243 CGKYVLHFINLFVLGAP---DDFSIKNYPYFMNQNWF 276
CG ++LH++ LF+ AP + F + + F+N +WF
Sbjct: 593 CGLFLLHYLELFLAEAPLTFNPFKVTKFSNFLNVDWF 629
>IMGA|Medtr5g075220.1 Peptidase C48, SUMO/Sentrin/Ubl1
chr05_pseudomolecule_IMGAG_V3 27352354-27357291 H
EGN_Mt090430 20090702
Length = 883
Score = 81.3 bits (199), Expect = 6e-16, Method: Composition-based stats.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 38/218 (17%)
Query: 90 IKENKRLNSAEFDCYFQSLWKSFPEDKRTSFTYLDSMWFHLYM------------KAPFK 137
++ N +N D Y L E +R F + +S +F K+ F+
Sbjct: 194 LQPNTYINDTIIDFYILYLKNKIQEKERARFHFFNSCFFRKLADMDKNPHPACDGKSAFQ 253
Query: 138 GKVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGES-------SESKARTPCMLLLD 190
+V W ++ +F K +V +P+ HWSL++ C+ GE+ E R PCML +D
Sbjct: 254 -RVCKWTRKVNLFEKDFVFMPVNFKHHWSLIVICNPGEAVNIIDKEPEKSLRLPCMLHMD 312
Query: 191 SLAVADPRRLEPDIRKFVFDIYRSEGRSENRKLIYQIPL--------FLP-KVPQQRNGE 241
S+ + + K + Y SE + +K Y L FLP ++PQQ N
Sbjct: 313 SI------KGHHNGLKDLVQSYLSEEWKDRKKDTYGEDLSSRFLNMPFLPVEIPQQENSF 366
Query: 242 ECGKYVLHFINLFVLGAPDD---FSIKNYPYFMNQNWF 276
+CG ++LH++ LFV P D F+ F+N +WF
Sbjct: 367 DCGLFLLHYLELFVAQVPFDFNPFTPTKLSNFLNVDWF 404
>IMGA|Medtr5g075230.1 Peptidase C48, SUMO/Sentrin/Ubl1
chr05_pseudomolecule_IMGAG_V3 27357932-27363459 E
EGN_Mt090430 20090702
Length = 676
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 18/159 (11%)
Query: 133 KAPFKGKVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGE-------SSESKARTPC 185
K+ F+ +V W ++ +F K +V +P+ HWSL++ C+ GE E R PC
Sbjct: 207 KSAFQ-RVRKWTRKVNLFEKDFVFMPVNFKHHWSLIVICYPGEVVNINDKVPEKSLRLPC 265
Query: 186 MLLLDSLAVADPRRLEPDIRKFVFDIYRSE-----GRSENRKLIYQIPLFLPKVPQQRNG 240
+L +DS+ L+ ++ ++ + ++ G + + + + VPQQ N
Sbjct: 266 ILHMDSIK-GYHSGLKDLVQSYLCEEWKERKMGTCGEDLSSRFL-NMRFLQAAVPQQENK 323
Query: 241 EECGKYVLHFINLFVLGAPDDFS---IKNYPYFMNQNWF 276
+CG ++LH++ F+ P DF+ + + F+N +WF
Sbjct: 324 FDCGLFLLHYLERFLDEIPSDFNPLILIKFSNFLNVDWF 362
>IMGA|Medtr2g009590.1 Peptidase C48, SUMO/Sentrin/Ubl1
chr02_pseudomolecule_IMGAG_V3 2143397-2151579 E
EGN_Mt090430 20090702
Length = 812
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 133 KAPFKGKVLTWIKRKQIFLKKYVLVPIVGWGHWSLLIFCHLGESS-------ESKARTPC 185
+A F+ +V W ++ +F K Y+L+P+ HWSL++ CH GE + ++ PC
Sbjct: 496 RAAFQ-RVRKWTRKVNLFEKDYILIPVNYSLHWSLIVICHPGEVPSFRDEEIKESSKVPC 554
Query: 186 MLLLDSLAVADPRRLEPDIRKFVFDIYRSEGRSENRKLI--------YQIPLFLPKVPQQ 237
+L +DSL + K +F Y E E + Q+ ++PQQ
Sbjct: 555 ILHMDSLKGSHKG------LKNLFQSYLCEEWKERHPNMADDFSSKFLQLRFISLELPQQ 608
Query: 238 RNGEECGKYVLHFINLFVLGAPDDFS 263
N +CG ++L+F+ F+ AP F+
Sbjct: 609 DNFYDCGLFLLYFVERFLEEAPIKFN 634