Jatropha Genome Database
- JcCB0129341.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0129341.10 - phase: 0
(727 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g161090.1 Transcriptional factor B3; Auxin response f... 460 e-129
IMGA|Medtr8g132840.1 Transcriptional factor B3; Auxin response f... 233 4e-61
IMGA|Medtr2g022250.1 Transcriptional factor B3; Auxin response f... 135 5e-32
IMGA|Medtr5g084140.1 Transcriptional factor B3; Auxin response f... 128 9e-30
IMGA|Medtr3g086210.1 Transcriptional factor B3; Auxin response f... 127 2e-29
IMGA|Medtr4g081050.1 Aux/IAA_ARF_dimerisation chr04_pseudomolecu... 96 6e-20
IMGA|Medtr4g080850.1 Aux/IAA_ARF_dimerisation chr04_pseudomolecu... 96 6e-20
IMGA|Medtr2g110840.1 Transcriptional factor B3; Auxin response f... 96 9e-20
IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;... 93 5e-19
IMGA|Medtr4g019570.1 AUX/IAA protein; Transcriptional factor B3;... 86 8e-17
IMGA|Medtr2g005100.1 AUX/IAA protein; Transcriptional factor B3;... 85 1e-16
>IMGA|Medtr4g161090.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr04_pseudomolecule_IMGAG_V3 41048269-41053932 E
EGN_Mt090430 20090702
Length = 1096
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/496 (52%), Positives = 315/496 (63%), Gaps = 41/496 (8%)
Query: 242 DPQRQFLEASKSFARSMPANQLLEMPQTTPASLPQSNIIQQQMTKNGNQTNARLSH---- 297
D QRQ L+ + + +R++ Q+ E+P T SL ++N + QMT + +Q N + SH
Sbjct: 628 DQQRQELDVTHN-SRAITPRQVFEIPHTLQNSLLEANSMNHQMTDHSSQNNVQFSHPAKQ 686
Query: 298 MPXXXXXXXXXPGTLSEMPGHMGLTTSSVVNHSVANHLSIAGNIILTSAAGAGLSGITEE 357
PG+LS+M H+GL +++ AN LS +G I T A G S T+
Sbjct: 687 QKLQHQQQQTQPGSLSKMSSHVGLPSATT-----ANQLSASGCSIRTVATGTVPSVNTDH 741
Query: 358 VPSCSTSPSTNNCANLVQPMNSRVHQNTVLGDDAAQSAATLLSPNALETMSCSANLVKDL 417
PSCSTSPSTNNC + P+ + + +GDD AQSA T+LS S +AN+VK
Sbjct: 742 APSCSTSPSTNNCVGALPPVTTSQILMSTIGDDVAQSAVTILS------QSSNANVVKYA 795
Query: 418 QQKSDVKPSLNIAKNQSQGFFPPQTYLNGATAQADYLDXXXXXXXVCVSQNDVHLXXXXX 477
Q DVKP LNI++N + F PQT LNGA Q D LD VC+SQ+D
Sbjct: 796 QPNYDVKPCLNISENHNPVNFYPQTCLNGAAIQTDCLDTSSSTTSVCLSQSDSRFHQTDR 855
Query: 478 XXXXX-XXMLLRDTSQDGELQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKDLP 536
M RD Q+ E+QAD R +V YG ++ Q+ +P+N D+ +++G LGKDL
Sbjct: 856 PVSYYPQSMFSRDNIQNVEVQADARCNVAYGNSMNGQMRMPLNLDSTVTKGTARLGKDLS 915
Query: 537 NNLSSGCMLANCENSKDA----PSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAPPP 592
N+ SSG +L EN+ DA SSMVSQ++GVPDM FNSIDSTINDS FL+ GPWAP P
Sbjct: 916 NDFSSGGLLGGYENNGDAQPELSSSMVSQTWGVPDMTFNSIDSTINDSGFLDSGPWAPRP 975
Query: 593 ---QFQRMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRF 649
QFQR+RTYTKVY KRGAVGRSIDITRYS YDELK DLARRF
Sbjct: 976 PPHQFQRIRTYTKVY-----------------KRGAVGRSIDITRYSGYDELKHDLARRF 1018
Query: 650 GIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDF 709
GIEGQLEDRQR+GWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDF
Sbjct: 1019 GIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDF 1078
Query: 710 GNSVFPNQACSSSDNG 725
GN P QA SSSD G
Sbjct: 1079 GNGGLPRQASSSSDGG 1094
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 87/149 (58%), Gaps = 16/149 (10%)
Query: 1 MPWLGDDMYMKDPHSLPGLSLVQWMNMQQNPSLANSLQPNYMQSLSGSVLQNLPGADLSR 60
MPWLGDDM MKDP + PG+SL QWMN+QQNP++ +SLQPN++ S+ SV+QNLPG+D++
Sbjct: 405 MPWLGDDMCMKDPQAFPGMSLAQWMNIQQNPAMVSSLQPNHVPSMPASVVQNLPGSDIAH 464
Query: 61 QLGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLNPLGSIIQSQHQLGDITQQPR 120
QLG S S+ + LG+++Q + Q R
Sbjct: 465 QLGFS---------TQQISQSNNVAFNAPGMPQMPLSTSSGLGAVMQPE-------QHSR 508
Query: 121 QNLVTQTIPSSQVQPQNLQPQTLAQNTNI 149
QNL QT+P SQVQ Q L PQ++ Q NI
Sbjct: 509 QNLAYQTLPQSQVQTQLLNPQSIVQTNNI 537
>IMGA|Medtr8g132840.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr08_pseudomolecule_IMGAG_V3 31477595-31471354 E
EGN_Mt090430 20090702
Length = 1120
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 163/377 (43%), Positives = 206/377 (54%), Gaps = 64/377 (16%)
Query: 357 EVPSCSTSPSTNNCANLVQPMNSRVHQNTVLGDDAAQSAATLLSPNALETMSCSANLVKD 416
E PSCSTSPSTNNC R+ Q +L + Q T+ A+E S NL+ D
Sbjct: 787 EAPSCSTSPSTNNC---------RITQPNLLKRNQ-QVPTTIGGILAVEPTS---NLIHD 833
Query: 417 LQQKSD--VKPSLNIAKNQSQGFFPPQTYLNGATAQADYLDXXXXXXXVCVSQNDVHLXX 474
LQ KSD +K + K Q L D L+ C+ +V
Sbjct: 834 LQSKSDMHIKHEFSNVKGSDQ--------LKYKGTTTDQLEASSGTS-YCLDPGNVQ--- 881
Query: 475 XXXXXXXXXXMLLRDTSQDGELQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKD 534
+ L + +G++Q++ R ++P+ +N++ + SD +LS G KD
Sbjct: 882 --------QNLPLSNFCMEGDVQSNPRINLPFDSNLDG-----LMSDTMLSRG-FDSQKD 927
Query: 535 LPNNLSSGCMLANCENSKDAPSSMVSQSFGVPDMAFN---SIDSTINDSS-FLNRGPWAP 590
L N LS+ ++ + + + SQSFG+PDM+F S D IND+S LN G A
Sbjct: 928 LQNLLSNYDAAPRDIETELSTADISSQSFGLPDMSFKPGCSNDVGINDTSGVLNNGLRAN 987
Query: 591 PPQFQRMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFG 650
Q QRMRTYTKV KRG+VGR ID+TRY YDEL+ DLAR FG
Sbjct: 988 --QNQRMRTYTKVQ-----------------KRGSVGRCIDVTRYKGYDELRYDLARMFG 1028
Query: 651 IEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFG 710
IEGQLED QR WKLVYVDHEND+LLVGDDPWEEFV+CV+ IKILS EVQQMSLDGD G
Sbjct: 1029 IEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLG 1088
Query: 711 NSVFPNQACSSSDNGNV 727
N PNQA S +D+GN
Sbjct: 1089 NVTIPNQASSGTDSGNA 1105
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQNPSLANSLQPNYMQSLSGSVLQ-NLPGAD 57
MPWLGDD MKD S PGLSLVQWM+MQQ + + + LS + L NL D
Sbjct: 394 MPWLGDDFGMKDASSSVFPGLSLVQWMSMQQKNQFSGAQSGCFPSMLSSNTLHSNLSTDD 453
Query: 58 LSRQLGL 64
S+ L
Sbjct: 454 PSKLLSF 460
>IMGA|Medtr2g022250.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr02_pseudomolecule_IMGAG_V3 5896756-5890761 E
EGN_Mt090430 20090702
Length = 915
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 74/90 (82%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+ GRS+DIT++S Y+EL+ +LAR FG+EG+LED R GW+LV+VD ENDVLL+
Sbjct: 785 VKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLL 844
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
GD PW EFVN V CIKILSP+EVQQM G
Sbjct: 845 GDGPWPEFVNSVWCIKILSPEEVQQMGNTG 874
>IMGA|Medtr5g084140.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr05_pseudomolecule_IMGAG_V3 31997139-31987335 E
EGN_Mt090430 20090702
Length = 841
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 73/86 (84%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+VGRS+DI+R++ Y EL+++LA+ FGIEG+ ED R GW+LV+VD ENDVLL+
Sbjct: 718 VKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 777
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQM 703
GDDPWE FVN V IKILSP+++Q+M
Sbjct: 778 GDDPWESFVNNVWYIKILSPEDIQKM 803
>IMGA|Medtr3g086210.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr03_pseudomolecule_IMGAG_V3 20132850-20126074 E
EGN_Mt090430 20090702
Length = 849
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 73/86 (84%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+VGRS+DI+R+S Y EL+++L + FGIEG+LED R GW+LV+VD ENDVLL+
Sbjct: 726 VKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVLLL 785
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQM 703
GDDPWE FVN V IKILSP+++Q+M
Sbjct: 786 GDDPWESFVNNVWYIKILSPEDIQKM 811
>IMGA|Medtr4g081050.1 Aux/IAA_ARF_dimerisation
chr04_pseudomolecule_IMGAG_V3 16816088-16814453 E
EGN_Mt090430 20090702
Length = 361
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 619 QVYKRGA-VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G+ VGR+ID++R S Y++L +L + FG+EG L D + GW+++Y D END+++V
Sbjct: 236 KVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDK-GWRILYTDSENDIMVV 294
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSL 705
GDDPW EF + V I I + +EV++M+
Sbjct: 295 GDDPWHEFCDVVSKIHIYTKEEVEKMTF 322
>IMGA|Medtr4g080850.1 Aux/IAA_ARF_dimerisation
chr04_pseudomolecule_IMGAG_V3 16690637-16688857 E
EGN_Mt090430 20090702
Length = 361
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 619 QVYKRGA-VGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G+ VGR+ID++R S Y++L +L + FG+EG L D + GW+++Y D END+++V
Sbjct: 236 KVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDK-GWRILYTDSENDIMVV 294
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSL 705
GDDPW EF + V I I + +EV++M+
Sbjct: 295 GDDPWHEFCDVVSKIHIYTKEEVEKMTF 322
>IMGA|Medtr2g110840.1 Transcriptional factor B3; Auxin response
factor; Aux/IAA_ARF_dimerisation
chr02_pseudomolecule_IMGAG_V3 26146196-26149942 H
EGN_Mt090430 20090702
Length = 672
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 12/123 (9%)
Query: 594 FQRMRTYTKVYCFGLLNAICTLA----------SMQVYKRGA-VGRSIDITRYSDYDELK 642
F+ M K++ F L A T + +V+K+G+ VGR+ID++R S Y++L
Sbjct: 513 FKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLV 572
Query: 643 QDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQ 702
+L R FG+EG L D + GW+++Y D END+++VGDDPW EF + V I I + +EV++
Sbjct: 573 SELERLFGMEGLLRDPDK-GWRILYTDSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEK 631
Query: 703 MSL 705
M++
Sbjct: 632 MTI 634
>IMGA|Medtr4g152210.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
37661517-37656640 E EGN_Mt090430 20090702
Length = 821
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 66/93 (70%), Gaps = 6/93 (6%)
Query: 613 CTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHE 671
CT +V+K+G A+GRS+D+T++SDYDEL +L + F G+L Q+ W +V+ D+E
Sbjct: 700 CT----KVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQK-DWLVVFTDNE 754
Query: 672 NDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D++LVGDDPW+EF + VR I I +E+Q+MS
Sbjct: 755 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMS 787
>IMGA|Medtr4g019570.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr04_pseudomolecule_IMGAG_V3
4019217-4014242 E EGN_Mt090430 20090702
Length = 666
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 3/93 (3%)
Query: 612 ICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDH 670
IC+ + +V +G AVGR++D+ + YD+L +L F I+GQL+ R W++V+ D
Sbjct: 551 ICSRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQHRN--TWEIVFTDD 608
Query: 671 ENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 703
E D++LVGDDPW EF N VR I I S Q+V++M
Sbjct: 609 EGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 641
>IMGA|Medtr2g005100.1 AUX/IAA protein; Transcriptional factor B3;
Auxin response factor chr02_pseudomolecule_IMGAG_V3
92528-103456 E EGN_Mt090430 20090702
Length = 670
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ AVGR++D+TR+ Y++L + L F IEG+L + W +VY D+E+
Sbjct: 548 CTKVHMQGM---AVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATK-KWLVVYTDNED 603
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D+++VGDDPW EF + VR + I +P+EV+++S
Sbjct: 604 DMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLS 635