Jatropha Genome Database

JcCB0126561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0126561.10 + phase: 2 /pseudo/partial
         (177 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g021700.1 NAD-dependent epimerase/dehydratase; Short-...   166   5e-42
IMGA|Medtr5g021730.1 NAD-dependent epimerase/dehydratase; Short-...   166   8e-42

>IMGA|Medtr5g021700.1 NAD-dependent epimerase/dehydratase;
           Short-chain dehydrogenase/reductase SDR; GDP-mannose
           4,6-dehydratase chr05_pseudomolecule_IMGAG_V3
           8340648-8338692 E EGN_Mt090430 20090702
          Length = 369

 Score =  166 bits (420), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 112/203 (55%), Gaps = 46/203 (22%)

Query: 20  PIQLLKTTPFHPKSPYAVLKCVAHWYTVNYHEAYRLFACNRTLFNHEAMQKRCG*FCNKK 79
           P    +TTPFHP+SPYA  K  AHWYTVNY EAY +FACN  LFNHE+ ++       K 
Sbjct: 166 PPPQSETTPFHPRSPYAASKVAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKI 225

Query: 80  SRTI-------------------------------MWWPRRSR------IRWRNWH---- 98
           +R +                               MW   +        +   + H    
Sbjct: 226 TRAVGRIKIGLQSKLFLGNLSASRDWGFAGDYVEAMWLMLQQEKADDYVVATEDSHTVEE 285

Query: 99  -----LGILALN*KDHVVIDKRYFRPAEVDNLKGDSSNARKVLGWKPKVGFEQLVKTMVD 153
                 G + LN KDHVVIDKRYFRP EVDNLKGD+S A+KVLGWKPKV FE+LV+ MVD
Sbjct: 286 FLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVSFEELVRMMVD 345

Query: 154 EDIEFAKREKMLVDVGYMVVRKH 176
            D+E AK+EK+LVD GY+  ++ 
Sbjct: 346 NDVEMAKKEKVLVDAGYIDAQQQ 368


>IMGA|Medtr5g021730.1 NAD-dependent epimerase/dehydratase;
           Short-chain dehydrogenase/reductase SDR; GDP-mannose
           4,6-dehydratase chr05_pseudomolecule_IMGAG_V3
           8349077-8347408 E EGN_Mt090430 20090702
          Length = 369

 Score =  166 bits (419), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 112/203 (55%), Gaps = 46/203 (22%)

Query: 20  PIQLLKTTPFHPKSPYAVLKCVAHWYTVNYHEAYRLFACNRTLFNHEAMQKRCG*FCNKK 79
           P    +TTPFHP+SPYA  K  AHWYTVNY EAY +FACN  LFNHE+ ++       K 
Sbjct: 166 PPPQSETTPFHPRSPYAASKVAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKI 225

Query: 80  SRTI-------------------------------MWWPRRSR------IRWRNWH---- 98
           +R +                               MW   +        +   + H    
Sbjct: 226 TRVVGRIKIGLQSKLFLGNLSASRDWGFAGDYVEAMWLMLQQEKADDYVVATEDSHTVEE 285

Query: 99  -----LGILALN*KDHVVIDKRYFRPAEVDNLKGDSSNARKVLGWKPKVGFEQLVKTMVD 153
                 G + LN KDHVVIDKRYFRP EVDNLKGD+S A+KVLGWKPKV FE+LV+ MVD
Sbjct: 286 FLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVSFEELVRMMVD 345

Query: 154 EDIEFAKREKMLVDVGYMVVRKH 176
            D+E AK+EK+LVD GY+  ++ 
Sbjct: 346 NDVEMAKKEKVLVDAGYIDAQQQ 368