Jatropha Genome Database

JcCB0125821.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125821.20 - phase: 0 /partial
         (101 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g147670.1 Alkaline phytoceramidase chr08_pseudomolecu...   163   2e-41
IMGA|Medtr2g029600.1 Alkaline phytoceramidase chr02_pseudomolecu...   162   4e-41

>IMGA|Medtr8g147670.1 Alkaline phytoceramidase
           chr08_pseudomolecule_IMGAG_V3 36413340-36417311 F
           EGN_Mt090430 20090702
          Length = 251

 Score =  163 bits (412), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/99 (76%), Positives = 81/99 (81%)

Query: 1   YKYYIHTEDASAKRLAKLYVATLFTGSLSWLFDRIFCKNISNWPINPQGHALWHVFMGFN 60
           YKYYIHT+D  AKRLAKL++ TL  GSL    DR+FCK IS  PINPQGHALWHVFMGFN
Sbjct: 152 YKYYIHTQDVLAKRLAKLFLGTLILGSLFGFCDRVFCKEISRSPINPQGHALWHVFMGFN 211

Query: 61  SYFANTFLMFCRAHQRGWAPKVGYFGGVLPYVKIEKSKK 99
           SYFANTFLMFCRA QRGW+PKV Y  GVLPYVKIEK K 
Sbjct: 212 SYFANTFLMFCRAQQRGWSPKVVYLMGVLPYVKIEKPKS 250


>IMGA|Medtr2g029600.1 Alkaline phytoceramidase
           chr02_pseudomolecule_IMGAG_V3 7924422-7926820 E
           EGN_Mt090430 20090702
          Length = 255

 Score =  162 bits (410), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 80/99 (80%)

Query: 1   YKYYIHTEDASAKRLAKLYVATLFTGSLSWLFDRIFCKNISNWPINPQGHALWHVFMGFN 60
           YKYYI+T D  AK +AKLYVATL  GSL WL DR+FCK IS WP+NPQGHALWHVFMG N
Sbjct: 156 YKYYIYTADVCAKWIAKLYVATLLLGSLFWLCDRVFCKEISQWPVNPQGHALWHVFMGLN 215

Query: 61  SYFANTFLMFCRAHQRGWAPKVGYFGGVLPYVKIEKSKK 99
           SYFANTFLMFCRA QRGW+PK     GVLPYVKIEK K 
Sbjct: 216 SYFANTFLMFCRAQQRGWSPKFVRLFGVLPYVKIEKPKS 254