Jatropha Genome Database

JcCB0125821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125821.10 + phase: 2 /partial
         (138 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g029610.1 Phosphatidate cytidylyltransferase chr02_ps...   221   9e-59
IMGA|Medtr5g101250.1 Phosphatidate cytidylyltransferase chr05_ps...   194   1e-50

>IMGA|Medtr2g029610.1 Phosphatidate cytidylyltransferase
           chr02_pseudomolecule_IMGAG_V3 7934897-7928681 F
           EGN_Mt090430 20090702
          Length = 426

 Score =  221 bits (563), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 99/113 (87%), Positives = 110/113 (97%)

Query: 20  FPWKEVSILPVQWHAMCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMD 79
           FPWKE+SILPVQWHA+CLGLFASIIAPFGGFFASGFKRAFK+KDFGDSIPGHGG+TDRMD
Sbjct: 308 FPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGLTDRMD 367

Query: 80  CQMVMAVFAYIYHQSFVVPQSISVEMILDQILTNLTFEEQHALYTKLGEIIQE 132
           CQMVMAVFAYIYHQSFVVPQS+SVEMILDQIL +L+FEEQ ALY +LGE++Q+
Sbjct: 368 CQMVMAVFAYIYHQSFVVPQSLSVEMILDQILMSLSFEEQEALYRRLGEVLQQ 420


>IMGA|Medtr5g101250.1 Phosphatidate cytidylyltransferase
           chr05_pseudomolecule_IMGAG_V3 40510892-40507943 H
           EGN_Mt090430 20090702
          Length = 425

 Score =  194 bits (493), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 86/113 (76%), Positives = 102/113 (90%)

Query: 21  PWKEVSILPVQWHAMCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDC 80
           P KE+++LPVQWHA+ LGLFASIIAPFGGFFASGFKRAFK+KDFGDSIPGHGG TDRMDC
Sbjct: 308 PEKEIAVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDC 367

Query: 81  QMVMAVFAYIYHQSFVVPQSISVEMILDQILTNLTFEEQHALYTKLGEIIQER 133
           QMVMAVF YIYHQSF+VP   +++++LDQI+ +L FEEQ ALYT+LG+I+ ER
Sbjct: 368 QMVMAVFVYIYHQSFIVPHDYTIDVLLDQIMRDLGFEEQLALYTRLGQILHER 420