Jatropha Genome Database

JcCB0125761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125761.10 + phase: 0 /partial
         (209 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC147501_20.1 hypothetical protein AC147501.9 80184-71093 E...   107   3e-24
IMGA|Medtr5g097330.1 hypothetical protein chr05_pseudomolecule_I...    56   1e-08

>IMGA|AC147501_20.1 hypothetical protein AC147501.9 80184-71093 E
            EGN_Mt090430 20090702
          Length = 1284

 Score =  107 bits (268), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 113/233 (48%), Gaps = 36/233 (15%)

Query: 4    FVNGINLNLSSKPASADQLVAGSIILASLCAALDRIEFICEASYNLLWIQKYDIDILLAA 63
            F++GI+  L +  A+ +QLVA SIILASLCAA D I FI EASYN+L + + D  ++L  
Sbjct: 957  FLDGID-TLCANEATNEQLVAASIILASLCAATDYIGFISEASYNILRLCRCDSFVVLTI 1015

Query: 64   LHVFAYLGGDKFFSMKEYNLTMKVLKSIIIFLEGHXXXXXXXXXXXXXXXXGMKFHPCG- 122
            LH+FA LGG  +F+   Y L + VLKS+++F+EG                  +    C  
Sbjct: 1016 LHIFANLGGRTYFNSCSYGLMVTVLKSLVMFIEGGSVSVTTSCLPAINQ---LHTDLCSN 1072

Query: 123  -KCPFD--AVSVDMVVSELLEKFQSCAL-------SVSMHQHKDNAK--QCSSHE----- 165
             KCPF   A S+D+V S LLE  +           S +     DN    QCS+ +     
Sbjct: 1073 VKCPFSEGAESIDVVTSLLLENIKKHPFQQEEQFDSSNFRSLSDNYNNGQCSNQDVVPCQ 1132

Query: 166  --------------EDWEWTCGKIISGLPKILGRPMPDDFXXXXXXLIGQVGR 204
                            W+WT  K++S L  +L     ++       L+GQ+GR
Sbjct: 1133 LSDILSLLELVANKMSWQWTNTKLVSQLLHVLDSCAMENAAVAIIVLLGQLGR 1185


>IMGA|Medtr5g097330.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 38789084-38793643 E
           EGN_Mt090430 20090702
          Length = 714

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 54  KYDIDILLAALHVFAYLGGDKFFSMKEYNLTMKVLKSIIIFLEGHXXXXXXXXXXXXXXX 113
           K+D  ++L  LH FAYLGG KFF M  + L   VLKS+++ LEG                
Sbjct: 390 KWDSLMVLTMLHNFAYLGGQKFFDMDNFGLVATVLKSLVMLLEGESLSDVTAPCLPAINQ 449

Query: 114 XGMKFHPCGKCPF--DAVSVDMVVSELLEKFQSCALS---------VSMHQHKDNAKQCS 162
              +F     C     A S+D +   LLE+ ++C L            +    DN +Q S
Sbjct: 450 LHTEFCTNDSCQLLEGAESIDAIACLLLEEIKNCWLQGINQIDLSDSGLMPGNDNVRQRS 509

Query: 163 SHE 165
           + E
Sbjct: 510 NEE 512