Jatropha Genome Database
- JcCB0125511.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0125511.20 + phase: 0 /TE/partial
(1051 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 210 2e-54
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 204 2e-52
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 191 1e-48
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 191 1e-48
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 184 2e-46
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 167 2e-41
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 159 1e-38
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 157 2e-38
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 154 1e-37
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 141 1e-33
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 141 2e-33
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 135 1e-31
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 123 4e-28
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 122 7e-28
IMGA|Medtr6g077130.1 Zinc finger, CCHC-type chr06_pseudomolecule... 115 1e-25
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 110 4e-24
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 108 1e-23
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 108 1e-23
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 103 5e-22
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 102 1e-21
IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin, se... 94 5e-19
IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin, se... 94 5e-19
IMGA|Medtr3g044280.1 hypothetical retrotransposon, related chr03... 94 5e-19
IMGA|Medtr5g082230.1 hypothetical retrotransposon, related chr05... 94 5e-19
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 88 2e-17
IMGA|Medtr1g076760.1 hypothetical protein chr01_pseudomolecule_I... 84 4e-16
IMGA|Medtr8g128700.1 Integrase, catalytic region chr08_pseudomol... 83 6e-16
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 79 1e-14
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 78 3e-14
IMGA|Medtr5g089840.1 copia LTR rider, related chr05_pseudomolecu... 70 5e-12
IMGA|Medtr4g019480.1 Integrase, catalytic region chr04_pseudomol... 70 6e-12
IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related ... 61 4e-09
IMGA|Medtr3g044010.1 hypothetical protein chr03_pseudomolecule_I... 60 6e-09
IMGA|Medtr5g046390.1 gag-pol polyprotein, related chr05_pseudomo... 57 4e-08
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 56 1e-07
IMGA|Medtr4g110620.1 polyprotein-like, related chr04_pseudomolec... 55 1e-07
IMGA|Medtr1g102740.1 gag-pol polyprotein, related chr01_pseudomo... 55 2e-07
IMGA|Medtr1g102780.1 gag-pol polyprotein, related chr01_pseudomo... 54 5e-07
IMGA|Medtr7g116810.1 hypothetical protein chr07_pseudomolecule_I... 53 7e-07
IMGA|Medtr3g097840.1 hypothetical protein chr03_pseudomolecule_I... 51 3e-06
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 168/615 (27%), Positives = 278/615 (45%), Gaps = 83/615 (13%)
Query: 147 LASLPESWETLKISITNSTPHSGVSWEFVKNAVLNEEMRRKAQNPSSSQSDILLVDDKRN 206
L L +S++ ++ I P ++ F + V+ E + K P + +LV+
Sbjct: 158 LTGLNDSFDLVRSQILLMNPLPTINKIF--SMVMQHERQFKISIPVDDST--ILVNSAGK 213
Query: 207 NQPRGRSQSRSSNTRDKSRGRSNKFANIVCHHCGKKGHIKRYC-----RKFKSDQEKIKG 261
+Q RGR G SN C CG+ GH C R+ D + KG
Sbjct: 214 SQGRGRGN-----------GNSNSNGKRSCSFCGRDGHTIDICYRKHEREDLDDSKSCKG 262
Query: 262 KAKKEES------SDDEANVIAEFQLFIENTINLA-------------------TQETSW 296
+ E S ++ + + Q + +NL+ + +W
Sbjct: 263 NSNTEPSFGITKEQYEQLVTLLQSQQASSSKVNLSHVTNHVTSGITRISYTMNHSSFGTW 322
Query: 297 VIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDVV 356
++DSGA+ H S +NF SY P +K+ +G + G + LI ++V+
Sbjct: 323 IVDSGASDHICSSIKNFDSYAPIIPVHIKLPNGNMAIAKFSGTVTFSPG----LIARNVL 378
Query: 357 HVPDMHSNLISVGRLDDENFC-STFRN---------------------GQWKLTKGSMVI 394
+V + NL+SV +L +N C TF N G + L GS V
Sbjct: 379 YVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNLGSQVF 438
Query: 395 ANGKKDPKLYVMHAKLSRDAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKV 454
+ P + S F E LWH RLGH+S + + ++ +D
Sbjct: 439 SQFNHQPVIASS-QASSSTTFLPQE-----ALWHFRLGHLSNDRLLRMQQHFPCIKVDSN 492
Query: 455 HLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPL-TMSYGGNRYFVTFIDDHS 513
+ C C + ++ FK+S ++ + +++H D+ GP+ T S G++YF+T +DD+S
Sbjct: 493 SV--CDICHYSRHKKLPFKLSM-NKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYS 549
Query: 514 RKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQ 573
R TW+ K+K +V + F+ +E Q K+K +RTDNG E+ P F GI HQ
Sbjct: 550 RFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP--DFYSSKGIEHQ 607
Query: 574 TTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYD 633
T+ +TPQ NG ER ++ ++ R LL +KL K FW ++L A+++INR P LQ
Sbjct: 608 TSCVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAIYIINRIPTPLLQNK 667
Query: 634 TPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPI 693
+P + D ++ +VFGC ++ L + R+K D + ++CVF+GY Q G +D
Sbjct: 668 SPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLN 727
Query: 694 QKKMIRSRDAVFVEN 708
K + SR+ + E+
Sbjct: 728 HKTIFASRNVTYHEH 742
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 219/437 (50%), Gaps = 38/437 (8%)
Query: 295 SWVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKD 354
+W++DSGA+ H S + F SY P +K+ +G + G + LI ++
Sbjct: 391 TWIVDSGASDHICSSIKFFDSYAPIIPVHIKLPNGNMAIAKFSGTVNF----SPGLIARN 446
Query: 355 VVHVPDMHSNLISVGRLDDENFC-STFRN---------------------GQWKLTKGSM 392
V++V + NL+SV +L +N C TF N G + L GS
Sbjct: 447 VLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNLGSQ 506
Query: 393 VIANGKKDPKLYVMHAKLSRDAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLD 452
V + P + + + S F E LWH RLGH+S + + ++ +D
Sbjct: 507 VFSQFNHQPVIALSQSS-SSTTFLPQE-----ALWHFRLGHLSNDRLLRMQQHFPCIKVD 560
Query: 453 KVHLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPL-TMSYGGNRYFVTFIDD 511
+ C C + ++ FK+S ++ + +++H D+ GP+ T S G++YF+T +DD
Sbjct: 561 SNSV--CDICHYSRHKKLPFKLSM-NKASHCYELIHFDIWGPISTHSIHGHKYFITALDD 617
Query: 512 HSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIR 571
+SR TW+ K+K +V + F+ +E Q K+K +RTDNG E+ P F GI
Sbjct: 618 YSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP--DFYSSKGIE 675
Query: 572 HQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQ 631
HQT+ +TPQ NG ER ++ ++ R LL +KL K FW ++L A+++INR P LQ
Sbjct: 676 HQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPLLQ 735
Query: 632 YDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFD 691
+P + D ++ +VFGC ++ L + R+K D + ++CVF+GY Q G +D
Sbjct: 736 NKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYD 795
Query: 692 PIQKKMIRSRDAVFVEN 708
K + SR+ + E+
Sbjct: 796 LNHKTIFASRNVTYHEH 812
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 198/402 (49%), Gaps = 24/402 (5%)
Query: 293 ETSWVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLIL 352
+ W++D+GAT H F+SY+ V + +G +++ G + L + L +
Sbjct: 395 DPGWIVDTGATHHTCYDLNWFTSYSKIETINVNLPNGSVIEACYIGQVKLSKD----LSI 450
Query: 353 KDVVHVPDMHSNLISVGRLDDENFCST-FRNGQWKLTKGSMV--IANGKKDPKLYVMHAK 409
+V+++P NLISV +L E C F + + + + I K+ LY +
Sbjct: 451 DNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKEKHGLYYLETD 510
Query: 410 LSRDAFNVTEDDSTVEL----------WHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKC 459
R+ +V+ + VEL WH RLGH+S M + N M S + C
Sbjct: 511 -ERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMICM--NKMYSYVPVSPHTAC 567
Query: 460 SDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPL-TMSYGGNRYFVTFIDDHSRKTWV 518
C +Q + F IS K D+VH D+ GP T S G++YF+T +DD +R W+
Sbjct: 568 DVCQMCRQKILPFPISS-RNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTILDDCTRHVWI 626
Query: 519 YTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPK 578
LK+K + K F+++VERQ +K+K IR+DNG E+ F + GI HQ +
Sbjct: 627 VMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFM--LREFYDKKGIIHQRSCVY 684
Query: 579 TPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERV 638
TPQ NG ER ++ ++ R L+ +KL K FW A+L AV+LINR P L + V
Sbjct: 685 TPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILNNKSSYEV 744
Query: 639 WSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGY 680
+ L+VFGC ++ L R K D K R+C F+G+
Sbjct: 745 LYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGF 786
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 211/448 (47%), Gaps = 44/448 (9%)
Query: 295 SWVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKD 354
SW+IDSGA H + +F+S+ +V + +G + V G++ L L
Sbjct: 350 SWIIDSGANDHVCFSKTHFTSFYKIKPVLVTLPNGTSIYVHYAGNVHFT----PYLHLTH 405
Query: 355 VVHVPDMHSNLISVGRLDDENFCST-FRNGQWKL--TKGSMVIANGKKDPKLY--VMH-- 407
V++ P+ NLISV ++ D CS F + + + +I G K LY MH
Sbjct: 406 VLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFV 465
Query: 408 --------------AKLSRDAFNVTEDDSTV-------------ELWHKRLGHMSEKGMT 440
K++ A N++ + LWH RLGH+S + ++
Sbjct: 466 NQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLS 525
Query: 441 TLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLTMSY- 499
T+ + + + + C C + ++ F S S + ++H D+ GPL ++Y
Sbjct: 526 TMSR--LYPSIIVDNKAACDICHFARHKKLPFPHSS-SHANSKFQLLHFDIWGPLAINYV 582
Query: 500 GGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG 559
G++YF+T +DDH+R W+ LKSK +V K F+ L+E Q K IRTDNG E+
Sbjct: 583 HGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFL- 641
Query: 560 PFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAV 619
F GI HQ + +TPQ NG ER ++ ++ R LL +KL FW A L AV
Sbjct: 642 -LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 620 HLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIG 679
LINR P + LQ +P ++ +VFGC + L+ R+KL+ + R+ VF+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 680 YGQDQFGYRFFDPIQKKMIRSRDAVFVE 707
Y G +D +++ SR VF E
Sbjct: 761 YKSGFKGSVLYDLHTREIFISRHVVFHE 788
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 201/426 (47%), Gaps = 44/426 (10%)
Query: 295 SWVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKD 354
SW+IDSGA H + +F+S+ +V + +G + V G++ L L
Sbjct: 350 SWIIDSGANDHVCFSKTHFTSFYKIKPVLVTLPNGTSIYVHYAGNVHFT----PYLHLTH 405
Query: 355 VVHVPDMHSNLISVGRLDDENFCST-FRNGQWKL--TKGSMVIANGKKDPKLY--VMHA- 408
V++ P+ NLISV ++ D CS F + + + +I G K LY MH
Sbjct: 406 VLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFV 465
Query: 409 ---------------KLSRDAFNVTEDDSTV-------------ELWHKRLGHMSEKGMT 440
K++ A N++ + LWH RLGH+S + ++
Sbjct: 466 NQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLS 525
Query: 441 TLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLTMSY- 499
T+ + + + + C C + ++ F S S + ++H D+ GPL ++Y
Sbjct: 526 TMSR--LYPSIIVDNKAACDICHFARHKKLPFPHSS-SHANSKFQLLHFDIWGPLAINYV 582
Query: 500 GGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG 559
G++YF+T +DDH+R W+ LKSK +V K F+ L+E Q K IRTDNG E+
Sbjct: 583 HGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFL- 641
Query: 560 PFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAV 619
F GI HQ + +TPQ NG ER ++ ++ R LL +KL FW A L AV
Sbjct: 642 -LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 620 HLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIG 679
LINR P + LQ +P ++ +VFGC + L+ R+KL+ + R+ VF+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 680 YGQDQF 685
Y F
Sbjct: 761 YKNFYF 766
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 200/440 (45%), Gaps = 32/440 (7%)
Query: 296 WVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDV 355
W +DSGA H + F+S+ N V + +G + V G I + L++V
Sbjct: 379 WFLDSGANEHIVNNTHWFTSFHKINPRPVNLPNGSSVLVEYAGTIRFTPQ----FYLENV 434
Query: 356 VHVPDMHSNLISVGRLDDENFC-STFRNGQWKL--TKGSMVIANGKKDPKLYVMHAKLSR 412
++ P NLIS+ ++ C + F N Q L +I G++ Y A
Sbjct: 435 LYSPSFTLNLISIFKVCSSLNCYAIFHNKQCLLQDLHSQKMIGLGEQFGVYYSYSA---- 490
Query: 413 DAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAF 472
LWH RLGH+S K + + + +D VH C C KQ ++ F
Sbjct: 491 -------------LWHFRLGHVSPKRLIHMSQLYPTLTVD-VH-ATCDICHFAKQKKLPF 535
Query: 473 KISQPSRMKNMLDMVHSDLCGPLTM-SYGGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVF 531
S S +++H D+ GPL++ S +RYF+T +DD+SR W+ LKSK +V
Sbjct: 536 SNSI-SVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVLLKSKSEVSQHV 594
Query: 532 KQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNR 591
K F+NL++ Q K +R+DNG E+ +F GI H + +TPQ NG ER ++
Sbjct: 595 KNFINLIQTQYNITPKTVRSDNGPEFL--LHSFYASKGIVHHRSCVETPQQNGRVERKHQ 652
Query: 592 TLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRV 651
++ R LL +KL +W ALL A +INR L +P ++ + +V
Sbjct: 653 HILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKSPYQLLHDTIPAEHIFKV 712
Query: 652 FGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDAVFVENQTI 711
FG + L R+KL + R+ VF+GY GY D +++ SR F E+ I
Sbjct: 713 FGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGYVLLDIHTREIHISRHVQFYEH--I 770
Query: 712 EDVEKTQKQAADRFEDDSTD 731
T +E S+D
Sbjct: 771 LPYPATSSSITTAWEYFSSD 790
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 212/511 (41%), Gaps = 57/511 (11%)
Query: 296 WVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDV 355
W +DSGA H S F+S+ N V + +G + V G I ++DV
Sbjct: 381 WFLDSGANEHIVSSTHWFTSFHKINPKPVNLPNGTSVLVEYAGTIHFT----PHFYIEDV 436
Query: 356 VHVPDMHSNLISVGRLDDENFC-STFRNGQWKL--TKGSMVIANGKKDPKLYVMHAKLSR 412
++ P NLIS+ ++ C ++F + + L +I G++ L + H
Sbjct: 437 LYSPSFTLNLISIFKVCSSLHCYASFHDKKCFLQDLHSQKMIGLGEQVRGL-LGHVS--- 492
Query: 413 DAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAF 472
+KRL HMS T V N+ C C KQ +++F
Sbjct: 493 ---------------NKRLNHMSHLYPTLTVDNH----------ATCDICQFAKQKKLSF 527
Query: 473 KISQPSRMKNMLDMVHSDLCGPLTM-SYGGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVF 531
S S + +++H D+ GPL + S +RYF+T +DD+S W+ LKSK +V
Sbjct: 528 PTSV-SVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVSQHV 586
Query: 532 KQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNR 591
K F+NL+ Q K +R+DNG E+ ++F GI H + +TPQ NG ER ++
Sbjct: 587 KNFINLIHTQYHITPKVVRSDNGPEFL--LNSFYASKGIVHHKSCVETPQQNGRVERKHQ 644
Query: 592 TLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRV 651
++ R LL +KL +W ALL A+ +INR L +P ++ +V
Sbjct: 645 HILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTFKV 704
Query: 652 FGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDAVFVENQTI 711
FG + L+ R+KL + R+ VF+GY GY D +++ SR F E+
Sbjct: 705 FGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEHILP 764
Query: 712 EDVE-KTQKQAADRFEDDSTDVQIVPPATEQRQVGDXXXXXXXXXXXXXXXXIPHQNEPE 770
T D F DS P + P
Sbjct: 765 YPTNPSTITTTWDYFSSDSCSASNPLPKSSTISPIIPPPFIDV------------DTPPS 812
Query: 771 DDFDGVPVQPPAPEGSQTLRRSSRVRQPSTR 801
DD V P P +R+SSR+ QP T
Sbjct: 813 DDNHSVSPIPQPP----VIRKSSRITQPPTH 839
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 190/428 (44%), Gaps = 48/428 (11%)
Query: 282 FIENTINLATQETSWVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDIC 341
I +T + + W++DSGA H F+SY + +V + DG ++ V G I
Sbjct: 348 IINSTTCSSLSNSYWLVDSGANEHICRDLNLFTSYHAISPSIVTLPDGSIVTVTHAGYIN 407
Query: 342 LETENGSRLILKDVVHVPDMHSNLISVGRLDDENFCS-TFRNGQWKLTKGSMVIANGKKD 400
+ L +V++ NL+SV ++ + C+ F Q + + + G +
Sbjct: 408 FSPQ----FYLTNVLYSSSFRLNLMSVHKVCESLSCTFQFLPNQCIIQDSTSLKMIGLAN 463
Query: 401 PKLYVMHAKLSRDAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCS 460
+ D +L H L H M++L N + + V C
Sbjct: 464 ------------------QQDGLYKLGH--LSHQRMNMMSSLYSNIVSDNKNSV----CD 499
Query: 461 DCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLTMS-YGGNRYFVTFIDDHSRKTWVY 519
C KQ + F IS N +++H D+ GPL++S G++YF+T +DDHSR W+
Sbjct: 500 ICHFAKQKHLPFSISTSHATSN-FELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWII 558
Query: 520 TLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKT 579
+LK+K V K F+ +V+ Q KCIR+DNG E+ +F + GI HQ + +T
Sbjct: 559 SLKTKSGVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFL--ILSFYESLGILHQKSCVET 616
Query: 580 PQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVW 639
PQ NG ER + ++ R LL +KL +W ALL AV LINR P L+ +P
Sbjct: 617 PQQNGRVERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSPYYAL 676
Query: 640 SRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIR 699
K D +++ + R+ VF+GY G+ D +++
Sbjct: 677 HHKFPDIDTF---------------KNQASTRARKTVFLGYKSGYKGFILLDIHSREIFV 721
Query: 700 SRDAVFVE 707
SR VF E
Sbjct: 722 SRHVVFHE 729
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 146/284 (51%), Gaps = 21/284 (7%)
Query: 426 LWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAFKISQPSRMKNMLD 485
LWH RLGH+S + M + +++ + + + C C KQ + F S S +
Sbjct: 494 LWHFRLGHLSNQRMIKM--SHLYPSIVHNNRDVCDICHFSKQKHLPFS-SSLSHASTNFE 550
Query: 486 MVHSDLCGPLTMS-YGGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGK 544
++H D+ GP+++S G+RYF+T +DDHSR W+ LKSK +V K F+ ++ Q
Sbjct: 551 LLHFDIWGPISISSVHGHRYFLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQFHV 610
Query: 545 KLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHA 604
K +R+DNG E+ + F HGI HQ + +TPQ NG ER ++ ++ R LL +
Sbjct: 611 TPKYVRSDNGPEFL--LNDFYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQS 668
Query: 605 KLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDE 664
KL FW A+L AV LINR P L +P V K +++F
Sbjct: 669 KLPPSFWSYAILHAVFLINRVPTHVLHNQSPYHVLFHK---LPDIQLF------------ 713
Query: 665 RSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDAVFVEN 708
+SKL + R+ +F+GY GY FD +++ SR +F EN
Sbjct: 714 KSKLQPRARKSLFLGYKSGYKGYHLFDLSTREIFVSRHVIFHEN 757
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 459 CSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLTM-SYGGNRYFVTFIDDHSRKTW 517
C C + ++ F S ++H D+ GPL + S G++YF+T +DDH+R W
Sbjct: 16 CDVCHFARHKKLPFSHSSSHASSK-FQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLW 74
Query: 518 VYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPP 577
+ LK+K +V K F+ ++E Q K IRTDNG E+ F GI HQ++
Sbjct: 75 IILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFL--LHEFYASKGILHQSSCV 132
Query: 578 KTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPER 637
+TPQ NG ER ++ ++ R LL +KL FW A L AV LINR L +P
Sbjct: 133 ETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYH 192
Query: 638 VWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKM 697
+ +VFGC + L+ +KL+ + R+ VF+GY GY +D +++
Sbjct: 193 LLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREI 252
Query: 698 IRSRDAVFVE 707
SR VF E
Sbjct: 253 FISRHVVFHE 262
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 184/422 (43%), Gaps = 56/422 (13%)
Query: 285 NTI---NLATQETSWVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDIC 341
NTI +L W+IDSGA H S F SY V + +G + V G +
Sbjct: 375 NTIFSCSLHVPSDHWLIDSGANEHICSSLHLFHSYYRIKPICVNLPNGSSVIVQYAGTVV 434
Query: 342 LETENGSRLILKDVVHVPDMHSNLISVGRL-DDENFCSTFRNGQWKL--TKGSMVIANGK 398
+ V++ P LISV ++ + F + + K +I G
Sbjct: 435 F----SPHFHITHVLYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIGLGN 490
Query: 399 KDPKLYVMH--AKLSRDAFNVTEDDSTVE--------------------LWHKRLGHMSE 436
LY +H A S A ++ S +WH RLGH+S
Sbjct: 491 LCDGLYRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRLGHLSN 550
Query: 437 KGMTTLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLT 496
+ ++ M+ L ++ + A+ I+ + +++H D+ GPL+
Sbjct: 551 QRLS------MMHSLYS----------SITIDNKAYSIA-----SSKFELLHFDIWGPLS 589
Query: 497 M-SYGGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGG 555
+ S G++YF+T +DD SR WV LK+K +V + K F+ L+ K IR+DNG
Sbjct: 590 VTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGP 649
Query: 556 EYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEAL 615
E+ P F GI HQ + +TPQ NG ER ++ ++ R LL +KL FW A+
Sbjct: 650 EFLIP--EFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAV 707
Query: 616 LTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQC 675
+ AV LIN+ P + +P ++ + +VFGC F L +RSKL + R+
Sbjct: 708 IHAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSRARKS 767
Query: 676 VF 677
+F
Sbjct: 768 IF 769
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 183/435 (42%), Gaps = 65/435 (14%)
Query: 296 WVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDV 355
W+IDSGA H FSS+ V + +G ++ V G + S+ L V
Sbjct: 387 WLIDSGANEHICCDITFFSSFYRIKPVNVSLPNGTIVLVHYAGTVSF----NSKFYLNHV 442
Query: 356 VHVPDMHSNLISVGRLDDENFCSTFRNGQWKLTKGSM---VIANGKKDPKLYVMHAKLSR 412
++ P+ NLISV +L + C + L + +I K+ LY + S
Sbjct: 443 LYSPNFLLNLISVAKLCESLTCFFHFSLDKCLIQDQQSLKMIGLAKQMDGLYKFYPSSSS 502
Query: 413 ---DAF-------NVTEDDS---------TVELWHKRLGHMSEKGMTTLVKNNMLSGLDK 453
+ F NV S + LWH RLGH+S++ + TL ++L K
Sbjct: 503 CNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQRLQTL---SLLYPSIK 559
Query: 454 VHLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLTMSYGGNRYFVTFIDDHS 513
+ D A+ DLC + +++ +DHS
Sbjct: 560 I------DNKAI-----------------------CDLCH-----FAKHKHLPFTSNDHS 585
Query: 514 RKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQ 573
R W+ LK+K +V K F+ +++ K IRTDNG E+ HGI HQ
Sbjct: 586 RFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFM--LSTLYSSHGIIHQ 643
Query: 574 TTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYD 633
+ +TPQ NG ER ++ ++ R LL +KL +W A+ AV LINR P L
Sbjct: 644 KSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLINRVPTPTLNNQ 703
Query: 634 TPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPI 693
+P V K +VFGC + L+ +KL + R+ +FIGY G+ +D
Sbjct: 704 SPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQSGYKGFTLYDLH 763
Query: 694 QKKMIRSRDAVFVEN 708
+++ SR F EN
Sbjct: 764 SREIFISRHVTFHEN 778
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 183/448 (40%), Gaps = 69/448 (15%)
Query: 268 SSDDEANVIAEFQLFIENTIN---LATQETSWVIDSGATLHATSRRENFSSYTPENLGVV 324
+S + ++I+E NTI L + W+IDSGA H S S+ V
Sbjct: 302 TSANTNHIISEPSYAGINTIFPCCLHVKSNYWLIDSGANEHICSSLSLLHSFYIIKPLHV 361
Query: 325 KIADGKLLKVVGKGDICLETENGSRLILKDVVHVPDMHSNLISVGRLDDENFCSTFRNGQ 384
+ +G + V G + I ++ + D+ L + NF F N
Sbjct: 362 TLPNGTSVLVHYAGTVSFSPHFH---ITNKMIGLGDLCDGLCRLRIPASSNFSHCFVNN- 417
Query: 385 WKLTKGSMVIANGKKDPKLYVMHAKLSRDAFNVTEDDSTVELWHKRLGHMSEKGMTTLVK 444
++ K S N S N ST LWH RLGH+S + ++
Sbjct: 418 FQCNKVSYESCN--------------SVSCNNNVHIPSTA-LWHFRLGHLSNQRLS---- 458
Query: 445 NNMLSGLDKVHLEK---CSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLT-MSYG 500
M +H++ C C KQ ++ + S S + ++++ D+ GPL +S
Sbjct: 459 -QMHHLYPDIHVDNKFICDICHFAKQRKLPYN-SSTSIASSNFELLYLDIWGPLAKVSIH 516
Query: 501 GNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGP 560
G RYF+T +DDHSR W K+K +V + F+ L++ + K IR+DNG +
Sbjct: 517 GQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVFL-- 574
Query: 561 FDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVH 620
AF GI HQ + +TPQ N V
Sbjct: 575 LSAFYASQGIIHQRSCVETPQHN-----------------------------------VF 599
Query: 621 LINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGY 680
LINR P + L+ +P +V + + +VFGC + L+ R+KL + R+ VF+GY
Sbjct: 600 LINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYASTLQSHRTKLQSRARKSVFLGY 659
Query: 681 GQDQFGYRFFDPIQKKMIRSRDAVFVEN 708
G +D K++ SR+ F E+
Sbjct: 660 KSGYKGSFLYDLNTKEIFMSRNVTFHES 687
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 122 bits (307), Expect = 7e-28, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Query: 453 KVHLEKCSDCMAVKQNRVAFKISQPSRMKNMLDMVHSDLCGPLTM-SYGGNRYFVTFIDD 511
K+ + C+ C+ K +R AFK R K++L++VHSD+ GP+ + +Y GNRYF+TF+D+
Sbjct: 9 KIVEKSCNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDE 68
Query: 512 HSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGP-FDAFCKEHGI 570
+S+ W+Y +K K L+VFK+F L E+Q+G KLK + T GGEYT F+++C GI
Sbjct: 69 YSKMLWLYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGI 128
Query: 571 RHQTTPPKTP 580
H+ T P TP
Sbjct: 129 IHEVTTPYTP 138
>IMGA|Medtr6g077130.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 15158354-15162093 E
EGN_Mt090430 20090702
Length = 532
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 184/414 (44%), Gaps = 39/414 (9%)
Query: 5 TSKMISLNGVNYHIWRNKMRDLLMVTKMHLPMFGSSKPEDKTD----EEWAFEHEQVCGY 60
S++ G N+ W ++ LL V + + E K+D E+W +VC +
Sbjct: 38 VSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWN-NANKVCRH 96
Query: 61 -IRQFVDDNVYNHICNETHTRTLWDKLEQLYASKSGNNQLFYLTKLMNFKYQEGTSVADH 119
I + D +++ C+ + +WD + Y ++ Q F +
Sbjct: 97 TILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVI----------------- 139
Query: 120 LSEMQATIHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTPHSGVSWEFVKNAV 179
+E I +L I D + ++ LP SW+ K + + ++ + +++ +
Sbjct: 140 -NEYHQLIEELKAENIILPDVFVAAALVEKLPSSWDDYKQQLKHKHKQMSLN-DLIRHII 197
Query: 180 LNEEMRRK--AQNPSSSQSDILLVDDKRNNQPRGRSQSRSSNTRDKSRGRSNKF--ANI- 234
+ + R++ A + +S L+ Q R Q R N D + +N AN+
Sbjct: 198 IEDTSRKECGAARAKALESRANLI------QNNARKQQRYENKSDHALKVTNPNFKANLG 251
Query: 235 VCHHCGKKGHIKRYCRKFKSDQEKIKGKAKKEESSDDEANVIAEFQLFIENTINLATQET 294
C+ CGKKGH +CR K + + K KA + D + + I + ++L
Sbjct: 252 ECYVCGKKGHKAYHCRYRKVNGQPPKPKANLTQGDDKKYDDDDVIAAVI-SKVHLVNDVQ 310
Query: 295 SWVIDSGATLHATSRRENFSSYTP--ENLGVVKIADGKLLKVVGKGDICLETENGSRLIL 352
WV+DSGAT H ++RE F+SY ++ V + D + V GKG + L+ +G L L
Sbjct: 311 KWVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLAL 370
Query: 353 KDVVHVPDMHSNLISVGRLDDENFCSTFRNGQWKLTKGSMVIANGKKDPKLYVM 406
DV++VP + +NLISV L+ +F + + ++K ++ + NG D L+V+
Sbjct: 371 SDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVL 424
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Query: 493 GPLTM-SYGGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRT 551
GPL++ S G+RYF+T +DDH+R WV LK+K +V K F+ +++ K IRT
Sbjct: 523 GPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFIRT 582
Query: 552 DNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFW 611
DNG E+ P +F HGI HQ + +TPQ NG ER ++ ++ R LL +KL FW
Sbjct: 583 DNGPEFMLP--SFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFW 640
Query: 612 GEALLTAVHLINRSPCVPLQYDTP 635
A+ AV LINR P L +P
Sbjct: 641 SYAIHHAVFLINRVPTPLLHNQSP 664
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 2/161 (1%)
Query: 547 KCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKL 606
K IR DNG E+ F HGI H + +TPQ NG ER ++ ++ VR LL +KL
Sbjct: 459 KTIRIDNGPEFM--LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSKL 516
Query: 607 SKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERS 666
FW A+L AV LINR L +P V K S D +VFGC + L++ R+
Sbjct: 517 PPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHRT 576
Query: 667 KLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDAVFVE 707
KL + R+ +F+GY GY FD +++ SR F E
Sbjct: 577 KLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHE 617
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 107/245 (43%), Gaps = 52/245 (21%)
Query: 465 VKQNRVAFKISQPSRMKNMLDMVHSDLCGPL-TMSYGGNRYFVTFIDDHSRKTWVYTLKS 523
+Q+R+ F + + +++H D+ GP T ++ +YF+T +DD S+ TW L
Sbjct: 2 ARQSRLPFP-PKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSC 60
Query: 524 KDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG-PFDAFCKEHGIRHQTTPPKTPQL 582
K V K F+ +VE Q +K IR+DNG E+T F + GI HQ + P TPQ
Sbjct: 61 KSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQ 120
Query: 583 NGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRK 642
NG+ ER ++ ++E R LL +KL ++W E
Sbjct: 121 NGVVERKHKFILETARALLFQSKLPVKYWSEF---------------------------- 152
Query: 643 DVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRD 702
R+K D KT VF+GY GY+ + +K+ SRD
Sbjct: 153 ---------------------HRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRD 191
Query: 703 AVFVE 707
+F E
Sbjct: 192 VIFHE 196
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Query: 537 LVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMER 596
++E Q K IRTDNG E+ F GI HQ + +TPQ NG ER ++ ++
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFL--LHEFYASKGILHQRSCVETPQQNGRVERKHQHILNI 58
Query: 597 VRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKA 656
R LL +KL FW A L AV LINR P L +P + +VFGC
Sbjct: 59 GRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCLC 118
Query: 657 FVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDAVFVE 707
+ L+ R+KL+ + R+ VF+GY GY +D +++ SR VF E
Sbjct: 119 YASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHE 169
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 40/188 (21%)
Query: 521 LKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYT-GPFDAFCKEHGIRHQTTPPKT 579
+K + FKQ L+E Q GKK+K ++ DNG E+ F+ FCK GI T
Sbjct: 1 MKHRSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNT 60
Query: 580 PQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVW 639
PQ N +A+RMN+TL+ER RC+LS+A L++ FWGE
Sbjct: 61 PQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGET------------------------- 95
Query: 640 SRKDVSYDHLRVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIR 699
FGC + + KL+ + ++ VF+GYG YR + P + ++I
Sbjct: 96 -----------GFGCTVYYRV---NEGKLESRAKKRVFVGYGDGVKEYRIWSPSENRVIL 141
Query: 700 SRDAVFVE 707
SR+ VF E
Sbjct: 142 SRNVVFDE 149
>IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr03_pseudomolecule_IMGAG_V3
12336621-12336989 H EGN_Mt090430 20090702
Length = 122
Score = 93.6 bits (231), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 271 DEANVIAEFQLFIENTINLATQETSWVIDSGATLHATSRRENFSSYTPENLGVVKIADGK 330
+ +N+ + +L + ++ +SWVIDSG ++H S R+ FSSYT G VK+A
Sbjct: 5 ERSNLTYDNELLLVEEHDIVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEG 64
Query: 331 LLKVVGKGDICLETENGSRLILKDVVHVPDMHSNLISVGRLDDENFCSTFRNGQWKLT 388
+LK VG D+ LE NG++L LKD HV D+ NL+SV +L DE + S F WK++
Sbjct: 65 VLKCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr05_pseudomolecule_IMGAG_V3
30911334-30910966 H EGN_Mt090430 20090702
Length = 122
Score = 93.6 bits (231), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/118 (40%), Positives = 71/118 (60%)
Query: 271 DEANVIAEFQLFIENTINLATQETSWVIDSGATLHATSRRENFSSYTPENLGVVKIADGK 330
+ +N+ + +L + ++ +SWVIDSG ++H S R+ FSSYT G VK+A
Sbjct: 5 ERSNLTYDNELLLVEEHDIVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEG 64
Query: 331 LLKVVGKGDICLETENGSRLILKDVVHVPDMHSNLISVGRLDDENFCSTFRNGQWKLT 388
+LK VG D+ LE NG++L LKD HV D+ NL+SV +L DE + S F WK++
Sbjct: 65 VLKCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr3g044280.1 hypothetical retrotransposon, related
chr03_pseudomolecule_IMGAG_V3 12337068-12337358 H
EGN_Mt090430 20090702
Length = 96
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 417 VTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAFKISQ 476
+ E VELWHKRL HM EK M L K+N+LS + HL+KC C+ K+++V+F+
Sbjct: 1 MVESTEKVELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHS 60
Query: 477 PSRMKNMLDMVHSDLCGPL-TMSYGGNRYFVTFIDDH 512
P R +LD+VH L GP+ T + GG+ YF++FIDDH
Sbjct: 61 PKR-PTILDLVHCHLFGPMKTGTIGGSTYFLSFIDDH 96
>IMGA|Medtr5g082230.1 hypothetical retrotransposon, related
chr05_pseudomolecule_IMGAG_V3 30910887-30910597 H
EGN_Mt090430 20090702
Length = 96
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 417 VTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAVKQNRVAFKISQ 476
+ E VELWHKRL HM EK M L K+N+LS + HL+KC C+ K+++V+F+
Sbjct: 1 MVESTEKVELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHS 60
Query: 477 PSRMKNMLDMVHSDLCGPL-TMSYGGNRYFVTFIDDH 512
P R +LD+VH L GP+ T + GG+ YF++FIDDH
Sbjct: 61 PKR-PTILDLVHCHLFGPMKTGTIGGSTYFLSFIDDH 96
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 579 TPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERV 638
TPQ NG+AERMN+TL+E+ R +LS+ L++ FW EA+ T +L+NR P + T +
Sbjct: 5 TPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYEL 64
Query: 639 WSRKDVSYDHLRVFGCKAFVHI--LKDERSK 667
W K V Y +LRVFGC + H+ K ER K
Sbjct: 65 WPGKSVDYSNLRVFGCTVYYHVNEWKLERRK 95
>IMGA|Medtr1g076760.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 15437706-15436255 H
EGN_Mt090430 20090702
Length = 186
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 13/95 (13%)
Query: 605 KLSK-RFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKD 663
KLSK GEAL T VH++N SP V LQY+ +++W RK++SYDHL VFGCK +
Sbjct: 102 KLSKGSMIGEALSTIVHVLNLSPSVSLQYEVRDKIWLRKNISYDHLCVFGCKTY------ 155
Query: 664 ERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMI 698
VK++ C+F+ Y D YRF+D KK+I
Sbjct: 156 ------VKSQHCMFLCYDLDGADYRFYDCDMKKLI 184
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 303 TLHATSRRENFSSYTPENLGVVK----IADGKLLKVVGKGDICLETENGSRLILKDVVHV 358
T H S+ + + Y + L ++ +A + LK VG G++ + NG++L LKDV +V
Sbjct: 15 TSHNFSKSPDATRYELQGLLALEFCQVLAYERELKSVGLGEVKWKMSNGTKLTLKDVNYV 74
Query: 359 PDMHSNLISVGRLDDENFCSTFRNGQWKLTKGSMV 393
PD+ NL+SV +L DE + F WKL+KGSM+
Sbjct: 75 PDIRLNLLSVAKLRDEGYDRLFSQYSWKLSKGSMI 109
>IMGA|Medtr8g128700.1 Integrase, catalytic region
chr08_pseudomolecule_IMGAG_V3 30179122-30179823 H
EGN_Mt090430 20090702
Length = 193
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Query: 353 KDVVHVPDMHSNLISVGRLDDENFCSTFRNGQWKLT-----KGSMVIANGKKDPKLYVMH 407
+D+ V D H++ V LD G+W LT G++V+A K LY +
Sbjct: 21 EDIALVVDGHTHYTDVWVLDSGASYHICPRGEWFLTYEQLDGGNIVMAASVKRGTLYFLQ 80
Query: 408 AKLSRD-----AFNVTEDDSTVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDC 462
D +F + ++D T +LWH RLGHMSE+GM L K+N+L G K+ S+
Sbjct: 81 GTTLTDYGVVASFEIDQEDMT-KLWHMRLGHMSERGMQILAKDNLLYG-HKIKDPGLSEH 138
Query: 463 MAV-KQNRVAFKISQPSRMKNMLDMVHSDLCGPLTM-SYGGNRYFVTFIDDHSRKT 516
A K++R F + R K LD +H D P + S GG++YF++ IDD+SR T
Sbjct: 139 YAFGKRHRNKF-LKVIHRTKGTLDYIHDDCWEPSRVESLGGHKYFLSLIDDYSRMT 193
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 597 VRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKA 656
VR +L K+ FWG A+ TA +++NR P ++ PE +WSR+ S +L+VFG
Sbjct: 2 VRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIF 61
Query: 657 FVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDAVFVENQ 709
+ H+ R KL+ KT + +GY + YR D KK+ +RD +E +
Sbjct: 62 YKHVPDSRRKKLEDKTEAMILVGY-HNTGAYRLLDLHSKKISITRDVKVLEEE 113
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 500 GGNRYFVTFIDDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEY-T 558
GG RYFV FIDD+S TW+Y +K++ ++ ++ F +++ Q K +K R DN EY
Sbjct: 2 GGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRD 61
Query: 559 GPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHA 604
+F E G + + P T Q G AER +R +++ V +L A
Sbjct: 62 SKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISA 107
>IMGA|Medtr5g089840.1 copia LTR rider, related
chr05_pseudomolecule_IMGAG_V3 34952559-34951978 H
EGN_Mt090430 20090702
Length = 154
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 80 RTLWDKLEQLYASKSGNNQLFYLTKLMNFKYQEGTSVADHLSEMQATIHQLSNMGIKFDD 139
+ LW+KLE LY +K +N+L + N + EGT ++DHLS + + +L ++ +K DD
Sbjct: 19 KELWEKLEGLYQAKGISNRLLLKEQFHNLRMDEGTKISDHLSTLNNIVSELESIEVKIDD 78
Query: 140 KILGLMVLASLPESWETLKISITNSTPHSGVSWEFVKNAVLNEEMRRKAQNPSSSQSDIL 199
+ L ++ SLP S+ LK + +S+E V +++EEM K+ S+ S +L
Sbjct: 79 EDKTLRIILSLPPSYVHLKPVLMYGK--ESLSFEEVATKIISEEMTMKSD--ESTSSSML 134
Query: 200 LVDDKRNNQ 208
L+ N +
Sbjct: 135 LIRSGANGK 143
>IMGA|Medtr4g019480.1 Integrase, catalytic region
chr04_pseudomolecule_IMGAG_V3 3983257-3980975 H
EGN_Mt090430 20090702
Length = 102
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 470 VAFKISQPSRMKNMLDMVHSDLCGPLTMSYGGNRYFVTFIDDHSRKTWVYTLKSKDQVLD 529
V+F S P + N+LD+VHSD+C + S G YFVTFIDDHSRK + +KSK QV
Sbjct: 32 VSFHESSPHKRPNLLDLVHSDICMMDSKSIDGASYFVTFIDDHSRKVQTFVMKSKGQVPC 91
Query: 530 VFKQFL 535
+F Q +
Sbjct: 92 IFMQVI 97
>IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related
chr05_pseudomolecule_IMGAG_V3 21011474-21012209 E
EGN_Mt090430 20090702
Length = 210
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 291 TQETSWVIDSGATLHATSRRENFSSYTPENLGV-VKIADGKLLKVVGKGDICLETENGSR 349
T+ SW++DSGA+ H T + + E +G V + + + +G + L +G R
Sbjct: 31 TKLESWILDSGASNHMTGTLQ-YMHDVKEVIGCPVGLPNCRTTTCTKEGTVKLT--DGLR 87
Query: 350 LILKDVVHVPDMHSNLISVGRLDDENFCSTFRNGQWKLTK---GSMVIANGKKDPKLYVM 406
L ++V++VP ++ NLIS+ +L DE C+ NG + + M+I G++ LY
Sbjct: 88 L--ENVLYVPKLNCNLISISQLLDELNCNVQFNGNFCAIQDRTSKMLIGAGEQRDGLYFF 145
Query: 407 HAKLSRDAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKN 445
A V E + +E+WHKRLGH S K T LV N
Sbjct: 146 REVPKVKACKV-EGTNQLEVWHKRLGHPSWK-TTQLVSN 182
>IMGA|Medtr3g044010.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 12181817-12181315 H
EGN_Mt090430 20090702
Length = 133
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 326 IADGKLLKVVGKGDICLETENGSRLILKDVVHVPDMHSNLISVGRLDDENFCSTFRNGQW 385
+A+ + KVVG G I + T NG L +V VP M N IS+ LD + F
Sbjct: 1 MANSYVSKVVGMGSIKIRTHNGKFCTLNEVRPVPHMTKNQISLSLLDKKGFS-------- 52
Query: 386 KLTKGSMVIANGKKDPKLYVMHAKLSRDAFNVTEDDSTVELWHKRLGHMSEKGMTTLVKN 445
K +V+A+ + D H ++R LWH RLGHMSE GM L K+
Sbjct: 53 --FKSEVVVASSEID------HKDMTR-------------LWHMRLGHMSESGMQILAKD 91
Query: 446 NML 448
N+L
Sbjct: 92 NLL 94
>IMGA|Medtr5g046390.1 gag-pol polyprotein, related
chr05_pseudomolecule_IMGAG_V3 19508075-19507539 H
EGN_Mt090430 20090702
Length = 178
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 296 WVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDV 355
W+IDSGAT + T RE F+ V+++A+G + G G I + +GS+L+L +V
Sbjct: 12 WLIDSGATNNLTCDREVFTELDKSYSSVIRVANGAEITSEGIGTIVFKNHSGSKLVL-NV 70
Query: 356 VHVPDMHSNLISVGRLDDENFCSTFRNGQWKLTKGSMVIANGKKDPKLYVMHAKLSRDAF 415
++VP + NL+SV +L +NG L + + N + + +++ + K +R
Sbjct: 71 LYVPQISENLLSVPQL--------LKNGYKVLFEHESCMINDQNNEEVFKIQMKKNRFYL 122
Query: 416 NVTED 420
+T++
Sbjct: 123 ELTKN 127
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 522 KSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQ 581
K+K +V + F+ +E Q K+K +RTDNG E+ P F GI HQT+ +TPQ
Sbjct: 4 KTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP--DFYSSKGIEHQTSCVETPQ 61
Query: 582 LNGLAERMNRTLMERVRCLLSHAKLSKRF 610
NG ER ++ ++ R +L +K F
Sbjct: 62 QNGRVERKHQHILNVARAMLFQSKFMVLF 90
>IMGA|Medtr4g110620.1 polyprotein-like, related
chr04_pseudomolecule_IMGAG_V3 25158785-25159321 H
EGN_Mt090430 20090702
Length = 178
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 68 NVYNHICNETHTRTLWDKLEQLYASKSGNNQLFYLTKLMNFKYQEGTSVADHLSEMQATI 127
N+ ++ N + KLE LY +K +NQLF K N EGT + +HL + I
Sbjct: 24 NLPANVQNLRSAKEFCKKLEGLYQAKKISNQLFPKEKFHNLHMDEGTKIFNHLCTLNDII 83
Query: 128 HQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTPHSGVSWEFVKNAVLNEEMRRK 187
+L ++ +K D+ L ++ SLP + LK+ + K +++EE RR
Sbjct: 84 FELESIKVKIYDEDKALSLILSLPPFYVHLKLVLMYGKESLSFEEVATKIKIISEE-RRM 142
Query: 188 AQNPSSSQSDILLVDDKRNNQPRG 211
+ S+S S +LL N + G
Sbjct: 143 KSDESTSSSLMLLTKSGANGKRIG 166
>IMGA|Medtr1g102740.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21153367-21155226 E
EGN_Mt090430 20090702
Length = 234
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 296 WVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDV 355
WV+DSG T H+T R F IA+G + + G G + +E+ +G +LIL +V
Sbjct: 13 WVVDSGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKLILNNV 72
Query: 356 VHVPDMHSNLISVGRLDDENFCSTFR 381
++P+ +L+SV L +E + F+
Sbjct: 73 NYIPENCYSLLSVAGLLEEGYQVLFK 98
>IMGA|Medtr1g102780.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21184395-21181931 E
EGN_Mt090430 20090702
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 296 WVIDSGATLHATSRRENFSSYTPENLGVVKIADGKLLKVVGKGDICLETENGSRLILKDV 355
WV++SG T H+T R F IA+G + + G G + +E+ +G +LIL +V
Sbjct: 36 WVVESGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKLILNNV 95
Query: 356 VHVPDMHSNLISVGRLDDENFCSTFR 381
++P+ +L+SV L +E + F+
Sbjct: 96 NYIPENCYSLLSVAGLLEEGYQVLFK 121
>IMGA|Medtr7g116810.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 27118605-27118065 H
EGN_Mt090430 20090702
Length = 141
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 650 RVFGCKAFVHILKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPIQKKMIRSRDA 703
++FGC +FV+I D RSKLD + +CVFIGY Q GY + P K +A
Sbjct: 10 KIFGCTSFVYIQSDGRSKLDPRALKCVFIGYSSTQKGYICYHPPSHKYFAKIEA 63
>IMGA|Medtr3g097840.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 23539798-23540964 E
EGN_Mt090430 20090702
Length = 54
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 617 TAVHLINRSPCVPLQYDTPERVWSRKDVSYDHLRVFGCKAFVHILKDERS 666
TA+ LIN +P + L D RVW K Y +LRV GC+AFVHI +++
Sbjct: 3 TAIDLINLTPSILLDGDVRNRVWIGKYACYGYLRVLGCRAFVHIPSPQKT 52