Jatropha Genome Database

JcCB0125201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0125201.10 + phase: 1 /pseudo/partial
         (568 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g079660.1 Asparagine synthase chr05_pseudomolecule_IM...   936   0.0  
IMGA|Medtr3g101710.1 Asparagine synthase chr03_pseudomolecule_IM...   873   0.0  
IMGA|Medtr5g079660.3 Asparagine synthase chr05_pseudomolecule_IM...   619   e-177
IMGA|Medtr5g079660.2 Asparagine synthase chr05_pseudomolecule_IM...   617   e-177
IMGA|Medtr5g077900.1 Rossmann-like alpha/beta/alpha sandwich fol...   196   2e-50
IMGA|Medtr2g014830.1 Stem-specific protein TSJT1, related chr02_...    50   3e-06
IMGA|AC233659_18.1 Stem-specific protein TSJT1, related AC233659...    49   6e-06

>IMGA|Medtr5g079660.1 Asparagine synthase
           chr05_pseudomolecule_IMGAG_V3 29716786-29711739 E
           EGN_Mt090430 20090702
          Length = 569

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/523 (83%), Positives = 477/523 (91%), Gaps = 1/523 (0%)

Query: 7   LKHRGPDWSGLYQQGDFYLAHQRLAIIDPASGDQPLFNEDKAIVVTVNGEIYNHEELRKR 66
           LKHRGPDWSGL+Q GD +LAHQRLAI+DPASGDQPLFNEDK+++VTVNGEIYNHE LRK+
Sbjct: 14  LKHRGPDWSGLHQHGDCFLAHQRLAIVDPASGDQPLFNEDKSVIVTVNGEIYNHEALRKQ 73

Query: 67  LPNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVILDTRDNSYIVARDAIGITSLYI 126
           L NH FRTGSDCDVIAHLYEEYGE+FVD LDG+FSFV+LDTRDNSYIVARDAIG+TSLYI
Sbjct: 74  LSNHTFRTGSDCDVIAHLYEEYGEDFVDKLDGIFSFVLLDTRDNSYIVARDAIGVTSLYI 133

Query: 127 GWGLDGSIWIASELKGLNDDCEHFESFPPGHLYSSKSGGLRPWYNPPWFSDVIPSTPYDP 186
           GWGLDGS+WI+SE+K LNDDCEHFE FPPGHLYSSK GG R WYNPPW+S+ IPS PYDP
Sbjct: 134 GWGLDGSVWISSEMKALNDDCEHFECFPPGHLYSSKDGGFRRWYNPPWYSEAIPSAPYDP 193

Query: 187 LALRRAFENAVVKRLMTDVPFXXXXXXXXXXXXXXXITARHLAGTKAAKQWGSQLHSFCV 246
           LALR AFE AV+KRLMTDVPF               IT+R+LA TKAA+QWGS+LHSFCV
Sbjct: 194 LALRHAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITSRYLATTKAAEQWGSKLHSFCV 253

Query: 247 GLEGSPDLKAAKEVADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLM 306
           GLEGSPDLKA KEVADYLGTVHHEF FTVQDGIDAIEDVIYH+ETYDVTTIRASTPMFLM
Sbjct: 254 GLEGSPDLKAGKEVADYLGTVHHEFTFTVQDGIDAIEDVIYHVETYDVTTIRASTPMFLM 313

Query: 307 SRKIKALGVKMVLSGEGSDEVFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKAT 366
           SRKIK+LGVK V+SGEGSDE+FGGYLYFHKAPNKEEFH+ETCRKIKALHQYDC RANK+T
Sbjct: 314 SRKIKSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCQRANKST 373

Query: 367 SAWGLEARVPFLDKEFINVAMAIDPEWKMIKPEQGRIEKWVLRRAFDDEEQPYLPKHILY 426
            AWGLEARVPFLDKEFINVAM IDPE KMIK ++GRIEK++LR+AFDDEE PYLPKHILY
Sbjct: 374 FAWGLEARVPFLDKEFINVAMNIDPENKMIKKDEGRIEKYILRKAFDDEENPYLPKHILY 433

Query: 427 RQKEQFSDGVGYSWIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIFERFFP 486
           RQKEQFSDGVGYSWIDGLKAHAA+HVTD+MM NAG+I+PHNTP TKEAYYYRMIFERFFP
Sbjct: 434 RQKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAGNIYPHNTPNTKEAYYYRMIFERFFP 493

Query: 487 QNSARLTVPGGASVACSTAKAVEWDATWSNNLDPSGRAALGVH 529
           Q + RLTVPGG +VACSTAKAVEWDA+WS NLDPSGRAALGVH
Sbjct: 494 Q-ATRLTVPGGPTVACSTAKAVEWDASWSKNLDPSGRAALGVH 535


>IMGA|Medtr3g101710.1 Asparagine synthase
           chr03_pseudomolecule_IMGAG_V3 24667424-24662779 E
           EGN_Mt090430 20090702
          Length = 570

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/523 (77%), Positives = 453/523 (86%)

Query: 7   LKHRGPDWSGLYQQGDFYLAHQRLAIIDPASGDQPLFNEDKAIVVTVNGEIYNHEELRKR 66
           L+HRGPDWSGL+   D YLAHQRLAI+DP SGDQPL+N DK ++VTVNGEIYNH++LR++
Sbjct: 28  LRHRGPDWSGLHCHQDCYLAHQRLAIVDPTSGDQPLYNYDKTVIVTVNGEIYNHKKLRQK 87

Query: 67  LPNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVILDTRDNSYIVARDAIGITSLYI 126
           L +H+FRTGSDC+VIAHLYEEYGE FVDMLDGMFSFV+LDTRD S+I ARDAIGIT LY+
Sbjct: 88  LKSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYL 147

Query: 127 GWGLDGSIWIASELKGLNDDCEHFESFPPGHLYSSKSGGLRPWYNPPWFSDVIPSTPYDP 186
           GWG DGSIW ASE+K L DDCE F SFPPGH+YSSK GGLR WYNPPWF++ IPST YDP
Sbjct: 148 GWGHDGSIWFASEMKALIDDCEQFISFPPGHIYSSKQGGLRRWYNPPWFTEKIPSTRYDP 207

Query: 187 LALRRAFENAVVKRLMTDVPFXXXXXXXXXXXXXXXITARHLAGTKAAKQWGSQLHSFCV 246
             LR AFE AVVKR+MTDVPF               +  R+LA T AA+QWGSQLH+FC+
Sbjct: 208 TVLREAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRYLADTDAARQWGSQLHTFCI 267

Query: 247 GLEGSPDLKAAKEVADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLM 306
           G++GSPDLKAAKEVA+YLGT HHE HFTVQ+GIDA+E+VIYHIETYDVTT+RASTPMFLM
Sbjct: 268 GIQGSPDLKAAKEVANYLGTCHHELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLM 327

Query: 307 SRKIKALGVKMVLSGEGSDEVFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKAT 366
           SRKIK+LGVKMVLSGEGSDE+FGGYLYFHKAPNKEE H+ETCRKIKALH YDCLRANK+T
Sbjct: 328 SRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHQETCRKIKALHLYDCLRANKST 387

Query: 367 SAWGLEARVPFLDKEFINVAMAIDPEWKMIKPEQGRIEKWVLRRAFDDEEQPYLPKHILY 426
           SAWG+EARVPFLDKEFIN AM IDPEWKMIKP+  RIEKWVLR AFDD+E PYLPKHILY
Sbjct: 388 SAWGIEARVPFLDKEFINTAMDIDPEWKMIKPDIERIEKWVLRNAFDDDENPYLPKHILY 447

Query: 427 RQKEQFSDGVGYSWIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIFERFFP 486
           RQKEQFSDGVGYSWIDGLK HA + VTD M+++A  ++P NTPTTKE Y+YR IFE+ FP
Sbjct: 448 RQKEQFSDGVGYSWIDGLKDHANEQVTDAMLKHANFVYPENTPTTKEGYHYRTIFEKLFP 507

Query: 487 QNSARLTVPGGASVACSTAKAVEWDATWSNNLDPSGRAALGVH 529
           + +AR TVPGG SVACSTAKAVEWDA WS NLDPSGRAALGVH
Sbjct: 508 KGAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVH 550


>IMGA|Medtr5g079660.3 Asparagine synthase
           chr05_pseudomolecule_IMGAG_V3 29715460-29711723 E
           EGN_Mt090430 20090702
          Length = 356

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 290/350 (82%), Positives = 313/350 (89%)

Query: 140 LKGLNDDCEHFESFPPGHLYSSKSGGLRPWYNPPWFSDVIPSTPYDPLALRRAFENAVVK 199
           +K LNDDCEHFE FPPGHLYSSK GG R WYNPPW+S+ IPS PYDPLALR AFE AV+K
Sbjct: 1   MKALNDDCEHFECFPPGHLYSSKDGGFRRWYNPPWYSEAIPSAPYDPLALRHAFEKAVIK 60

Query: 200 RLMTDVPFXXXXXXXXXXXXXXXITARHLAGTKAAKQWGSQLHSFCVGLEGSPDLKAAKE 259
           RLMTDVPF               IT+R+LA TKAA+QWGS+LHSFCVGLEGSPDLKA KE
Sbjct: 61  RLMTDVPFGVLLSGGLDSSLVASITSRYLATTKAAEQWGSKLHSFCVGLEGSPDLKAGKE 120

Query: 260 VADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVL 319
           VADYLGTVHHEF FTVQDGIDAIEDVIYH+ETYDVTTIRASTPMFLMSRKIK+LGVK V+
Sbjct: 121 VADYLGTVHHEFTFTVQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVI 180

Query: 320 SGEGSDEVFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLD 379
           SGEGSDE+FGGYLYFHKAPNKEEFH+ETCRKIKALHQYDC RANK+T AWGLEARVPFLD
Sbjct: 181 SGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCQRANKSTFAWGLEARVPFLD 240

Query: 380 KEFINVAMAIDPEWKMIKPEQGRIEKWVLRRAFDDEEQPYLPKHILYRQKEQFSDGVGYS 439
           KEFINVAM IDPE KMIK ++GRIEK++LR+AFDDEE PYLPKHILYRQKEQFSDGVGYS
Sbjct: 241 KEFINVAMNIDPENKMIKKDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYS 300

Query: 440 WIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIFERFFPQNS 489
           WIDGLKAHAA+HVTD+MM NAG+I+PHNTP TKEAYYYRMIFERFFPQ S
Sbjct: 301 WIDGLKAHAAKHVTDRMMLNAGNIYPHNTPNTKEAYYYRMIFERFFPQAS 350


>IMGA|Medtr5g079660.2 Asparagine synthase
           chr05_pseudomolecule_IMGAG_V3 29715460-29711723 E
           EGN_Mt090430 20090702
          Length = 364

 Score =  617 bits (1592), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 289/348 (83%), Positives = 312/348 (89%)

Query: 140 LKGLNDDCEHFESFPPGHLYSSKSGGLRPWYNPPWFSDVIPSTPYDPLALRRAFENAVVK 199
           +K LNDDCEHFE FPPGHLYSSK GG R WYNPPW+S+ IPS PYDPLALR AFE AV+K
Sbjct: 1   MKALNDDCEHFECFPPGHLYSSKDGGFRRWYNPPWYSEAIPSAPYDPLALRHAFEKAVIK 60

Query: 200 RLMTDVPFXXXXXXXXXXXXXXXITARHLAGTKAAKQWGSQLHSFCVGLEGSPDLKAAKE 259
           RLMTDVPF               IT+R+LA TKAA+QWGS+LHSFCVGLEGSPDLKA KE
Sbjct: 61  RLMTDVPFGVLLSGGLDSSLVASITSRYLATTKAAEQWGSKLHSFCVGLEGSPDLKAGKE 120

Query: 260 VADYLGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKALGVKMVL 319
           VADYLGTVHHEF FTVQDGIDAIEDVIYH+ETYDVTTIRASTPMFLMSRKIK+LGVK V+
Sbjct: 121 VADYLGTVHHEFTFTVQDGIDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVI 180

Query: 320 SGEGSDEVFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLD 379
           SGEGSDE+FGGYLYFHKAPNKEEFH+ETCRKIKALHQYDC RANK+T AWGLEARVPFLD
Sbjct: 181 SGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCQRANKSTFAWGLEARVPFLD 240

Query: 380 KEFINVAMAIDPEWKMIKPEQGRIEKWVLRRAFDDEEQPYLPKHILYRQKEQFSDGVGYS 439
           KEFINVAM IDPE KMIK ++GRIEK++LR+AFDDEE PYLPKHILYRQKEQFSDGVGYS
Sbjct: 241 KEFINVAMNIDPENKMIKKDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYS 300

Query: 440 WIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIFERFFPQ 487
           WIDGLKAHAA+HVTD+MM NAG+I+PHNTP TKEAYYYRMIFERFFPQ
Sbjct: 301 WIDGLKAHAAKHVTDRMMLNAGNIYPHNTPNTKEAYYYRMIFERFFPQ 348


>IMGA|Medtr5g077900.1 Rossmann-like alpha/beta/alpha sandwich fold
           chr05_pseudomolecule_IMGAG_V3 28780625-28782429 E
           EGN_Mt090430 20090702
          Length = 148

 Score =  196 bits (499), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/113 (81%), Positives = 100/113 (88%), Gaps = 5/113 (4%)

Query: 422 KHILYRQKEQFSDGVGYSWIDGLKAHAAQHVTDKMMQNAGHIFPHNTPTTKEAYYYRMIF 481
           +HIL RQKEQFS+GVGYSWID LKAH A+HVTD+MM NAG+I+PHNTP TKEAYYYRMIF
Sbjct: 2   QHILCRQKEQFSNGVGYSWIDDLKAHCAKHVTDRMMLNAGNIYPHNTPNTKEAYYYRMIF 61

Query: 482 ERFFPQ-----NSARLTVPGGASVACSTAKAVEWDATWSNNLDPSGRAALGVH 529
           ERFFPQ     NSARLTVPGG +VACSTAKAVEWDA+WS NLDPSGRAAL VH
Sbjct: 62  ERFFPQASVFGNSARLTVPGGPTVACSTAKAVEWDASWSKNLDPSGRAALEVH 114


>IMGA|Medtr2g014830.1 Stem-specific protein TSJT1, related
           chr02_pseudomolecule_IMGAG_V3 3912703-3914594 F
           EGN_Mt090430 20090702
          Length = 251

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 15/168 (8%)

Query: 13  DWSGLYQQGDFYLAHQRLAIIDPASGDQP-----LFNEDKAIVVTVNGEIYNHEELRKRL 67
           D+        FY+     A++  +  ++P     LF+    I     G ++N  +L K+ 
Sbjct: 36  DFMSCNSSNAFYMTFGNDALLAYSPSNKPSIHQRLFSGLDNIYCAFMGNLHNLSQLNKQY 95

Query: 68  PNHKFRTGSDCDVIAHLYEEY-------GENFVDMLDGMFSFVILDTRDNSYIVARDAIG 120
              K   G++   I   Y           +  +  L+G F+FVI D +D +   A  + G
Sbjct: 96  GLSK--GGNEAMFIIEAYRTLRDRGPYPADQVLKGLEGSFAFVIYDHKDGTVFAASGSDG 153

Query: 121 ITSLYIGWGLDGSIWIASELKGLNDDC-EHFESFPPGHLYSSKSGGLR 167
              LY G   DGS+ I+  L+ +   C + F  FP G L+ S+ G L 
Sbjct: 154 HIGLYWGIAADGSVVISENLELVKASCAKSFAPFPTGCLFHSEHGLLN 201


>IMGA|AC233659_18.1 Stem-specific protein TSJT1, related AC233659.1
           80671-78758 E EGN_Mt090430 20090702
          Length = 255

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 96  LDGMFSFVILDTRDNSYIVARDAIGITSLYIGWGLDGSIWIASELKGLNDDC-EHFESFP 154
           LDG F F+I D +D +  VA D  G   L+ G   DGS+ I+  L+ +   C + F  FP
Sbjct: 130 LDGSFGFIIYDDKDGTVFVASDRNGQIDLFWGIAADGSVVISENLELIKASCSKSFAPFP 189

Query: 155 PGHLYSSKSG 164
            G ++ S+ G
Sbjct: 190 TGCMFHSEHG 199