Jatropha Genome Database

JcCB0124021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0124021.10 + phase: 0 /pseudo/partial
         (122 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g109800.1 Tyrosine protein kinase chr04_pseudomolecul...   123   2e-29
IMGA|Medtr2g111620.1 Protein kinase; Alkaline phosphatase chr02_...   123   2e-29
IMGA|Medtr1g020440.1 Tyrosine protein kinase chr01_pseudomolecul...    58   1e-09
IMGA|Medtr5g010910.1 PAS; Protein kinase; chr05_pseudomolecule_I...    47   2e-06
IMGA|Medtr3g149670.1 Protein kinase chr03_pseudomolecule_IMGAG_V...    46   4e-06
IMGA|Medtr1g068540.1 Tyrosine protein kinase chr01_pseudomolecul...    46   5e-06

>IMGA|Medtr4g109800.1 Tyrosine protein kinase
           chr04_pseudomolecule_IMGAG_V3 24695957-24684955 E
           EGN_Mt090430 20090702
          Length = 818

 Score =  123 bits (309), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 64/69 (92%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +C L+RPWEGVPPERVVY VANEGSRLEIPEGPLGRLIS+CWAEP+ERPSCEEILSR
Sbjct: 750 MWELCNLSRPWEGVPPERVVYTVANEGSRLEIPEGPLGRLISECWAEPNERPSCEEILSR 809

Query: 114 LLDCEYTLC 122
           L+D EY++ 
Sbjct: 810 LVDIEYSMS 818


>IMGA|Medtr2g111620.1 Protein kinase; Alkaline phosphatase
           chr02_pseudomolecule_IMGAG_V3 26557631-26558408 E
           EGN_Mt090430 20090702
          Length = 140

 Score =  123 bits (309), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 66/69 (95%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEEILSR 113
           ++ +CTLNRPWEGVPPERVVY+VA+EGSR+EIPEGPLGRLISDCWA+ HERPSC+EILSR
Sbjct: 72  MWELCTLNRPWEGVPPERVVYSVAHEGSRMEIPEGPLGRLISDCWADAHERPSCDEILSR 131

Query: 114 LLDCEYTLC 122
           L+D EY+LC
Sbjct: 132 LVDMEYSLC 140


>IMGA|Medtr1g020440.1 Tyrosine protein kinase
           chr01_pseudomolecule_IMGAG_V3 4467307-4477038 E
           EGN_Mt090430 20090702
          Length = 930

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPE--GP-LGRLISDCW-AEPHERPSCEE 109
           L+ + T   PW G+ P +VV AV  +  RLEIPE   P + ++I DCW  EPH RPS  +
Sbjct: 851 LWELTTTKIPWHGMNPMQVVGAVGFQNKRLEIPEEMDPGVAQIIRDCWQTEPHLRPSFSQ 910

Query: 110 ILSRL 114
           ++SRL
Sbjct: 911 LMSRL 915


>IMGA|Medtr5g010910.1 PAS; Protein kinase;
           chr05_pseudomolecule_IMGAG_V3 2805367-2799278 E
           EGN_Mt090430 20090702
          Length = 748

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 4/66 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCW-AEPHERPSCEE 109
           L+ + T + PW+ +   +VV  V     RL++PEG    +  +I+DCW ++P +RPS EE
Sbjct: 666 LWEIMTQSIPWKDLNSLQVVGIVGFMDRRLDLPEGLDPHVASIINDCWQSDPEQRPSFEE 725

Query: 110 ILSRLL 115
           ++ R++
Sbjct: 726 LVQRMM 731


>IMGA|Medtr3g149670.1 Protein kinase chr03_pseudomolecule_IMGAG_V3
           39210400-39203754 E EGN_Mt090430 20090702
          Length = 916

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + T+ +PW G+ P +VV AVA +  +L IP      L  L+  CWA +P +RPS   
Sbjct: 833 LWELVTMQQPWSGLNPPQVVGAVAFQNRKLAIPSNISPVLSSLMESCWADDPAQRPSFGG 892

Query: 110 ILSRL 114
           I+  L
Sbjct: 893 IIESL 897


>IMGA|Medtr1g068540.1 Tyrosine protein kinase
           chr01_pseudomolecule_IMGAG_V3 13695135-13688228 E
           EGN_Mt090430 20090702
          Length = 255

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 4/63 (6%)

Query: 54  LYAVCTLNRPWEGVPPERVVYAVANEGSRLEIPEG---PLGRLISDCWA-EPHERPSCEE 109
           L+ + TL +PW  + P +VV AVA  G RLEIP      +  LI  CW+ EP  RPS   
Sbjct: 182 LWELVTLQQPWRQLNPSQVVAAVAFMGKRLEIPRHVNPQVAALIELCWSTEPRRRPSFSY 241

Query: 110 ILS 112
           I+ 
Sbjct: 242 IMK 244