Jatropha Genome Database

JcCB0122521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0122521.10 - phase: 0 
         (519 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g043770.1 Putative phytochrome kinase substrate 1, id...   244   7e-65
IMGA|AC146568_2.1 Histone H4 AC146568.11 12887-15197 E EGN_Mt090...   192   4e-49
IMGA|Medtr7g105020.1 phytochrome kinase substrate 1-like protein...    59   7e-09

>IMGA|Medtr5g043770.1 Putative phytochrome kinase substrate 1,
           identical, chr05_pseudomolecule_IMGAG_V3
           18119908-18118175 E EGN_Mt090430 20090702
          Length = 465

 Score =  244 bits (623), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 202/493 (40%), Positives = 264/493 (53%), Gaps = 59/493 (11%)

Query: 33  YLSNAEETFVDELAESNKKLIGQALEGIHFSSSGRKKVAEDGEIGVFSAEKYFNGVIDED 92
           YL+N E    D  A+S    I    E +H    G KK  EDGEIGVF AEKYFNGV + +
Sbjct: 25  YLNNKE--VKDPFADSIHPFISNRKEPLHL---GVKK-EEDGEIGVFDAEKYFNGV-EIE 77

Query: 93  SPRITKIIPRKYQQPKKEEISNDHIVPAKPAVNIQPATPKVNIQPATPSVVSESSRHSQT 152
           +PRI  +   K +  K                  Q    K  +Q  TPSV SESS +SQ+
Sbjct: 78  TPRIATLDANKLKYLKN-----------------QQENRKCKVQYGTPSVGSESSLNSQS 120

Query: 153 ALLHNFVQRKTSS--RKANKSGRNFLAGLGCKCYCSDKDSIDVDDEHVGEISFKKSPNPA 210
           ALL   ++  TSS  RK     ++ LA LGCKC C DK+S+DV D H GEISF KS    
Sbjct: 121 ALLQTTLKNSTSSNSRKNQVHRKSLLATLGCKCSCYDKNSVDVSD-HAGEISFNKSA--- 176

Query: 211 ALFQGKSVITKPVIKTSLDELDQTSLSDEIHSKNGIKKDTCXXXXXXXXXXXXXXXVR-F 269
              QGK+   K      L + DQ +    I +K    + T                V  +
Sbjct: 177 --VQGKTTSEK------LFKHDQDASDHSIKNKKTETRATSELLMNKDVYLQKQEKVSPY 228

Query: 270 QIQEKQVLKPRKSLEVFGSPVNDDKRSKSFRIERRLSMLSWDTTKNPKMEEIDYSATSGG 329
           ++Q +QV  PRK+LEVFGSP+ D+ R KS   + RL + SW+     + +EID+S T+  
Sbjct: 229 KMQLQQVDNPRKTLEVFGSPILDE-RCKSISFDMRLKIPSWEAASKLEEQEIDFS-TNCD 286

Query: 330 GIYNDNESDASSDLFEIESLSG-KVTPYLARQK-SDVTSGCVTPTTCYAPSEASIEWSVV 387
              +D  SDASSDLFEIES +G K + +L+R   S V SGC +P   YAPSEASIEWSVV
Sbjct: 287 DDDDDVGSDASSDLFEIESFTGNKTSSFLSRTTTSHVASGCTSPN-FYAPSEASIEWSVV 345

Query: 388 TASAADFSAMSDYEEFRPPPGPLSPIKTFAINNNLNTRFLSSKEIIPTCRPGIFLGCNSH 447
           TASA D+SA+SD+E+        SPI+T    N+LN +   +KE +P  RPG  LGCNS 
Sbjct: 346 TASAVDYSAVSDHEDQGSVVTIRSPIRTSF--NSLNGKHKINKE-MPRRRPGKLLGCNSQ 402

Query: 448 KAVRVAGDGYTP-NDKTNFDPRVMHSYMPVAKCPAETKL-LMGFDHRQRQHGFTSSHSLP 505
           KAV VAGD +T  N+K   + +++         P  T+  +  F  R  QHG+     L 
Sbjct: 403 KAVGVAGDAFTATNEKHGTNAKML---------PQMTRFKVESFGARNEQHGY-GKPPLR 452

Query: 506 RSHPSQSSHLLYI 518
           RS+    + LLYI
Sbjct: 453 RSNSPHGAQLLYI 465


>IMGA|AC146568_2.1 Histone H4 AC146568.11 12887-15197 E EGN_Mt090430
           20090702
          Length = 491

 Score =  192 bits (487), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 180/513 (35%), Positives = 247/513 (48%), Gaps = 85/513 (16%)

Query: 33  YLSNAEETFVDELAES---NKKLIGQALEGIHFSSSGRKKVAEDGEIGVFSAEKYFN-GV 88
           YL+  E  F+ ++ ES   N   I      +H       +V +  EIGVF AEKYFN G 
Sbjct: 37  YLNIKEGNFIAKIGESSQTNNPFINHRNSPLH-------QVEKAEEIGVFGAEKYFNRGE 89

Query: 89  IDEDSPRITKIIPRKYQQPKKEEISNDHIVPAKPAVNIQPATPKVNIQPATPSVVSESSR 148
           +D   P  TK +P++     KE ++ +              T K  ++  TPS+ S S+ 
Sbjct: 90  VDTPRPS-TKYLPQR-----KETMAIE--------------TRKYQVEYGTPSISSVSTW 129

Query: 149 HSQTALLHNFVQRKTSSRKANKSGRNFLAGLGCKCYCSDKDSIDVDDEHVGEISFKKSPN 208
           +SQ ALL + V+    + K  +  ++ L+ L  KC CSDK+S+D++D H  EISF    +
Sbjct: 130 NSQNALLKSGVRNSIGNSKEKEHAKSVLSSLRLKCSCSDKNSVDIND-HASEISFNNKTS 188

Query: 209 PAALFQGKSVITKPVIKTSLDELDQTSL---SDEIHSKNGI---KKDTCXXXXXXXXXXX 262
                QGK+   K V    LD+     +   S EI     +   K++             
Sbjct: 189 KYGAVQGKTT-PKKVFNLGLDDDLSVRIRKPSSEILINKDVYFQKQEKLRVGLNNEKNSL 247

Query: 263 XXXXVRFQIQEKQVL----KPRKSLEVFGSP--VNDDKRSKSFRIERRLSMLSWDTTKNP 316
                   +Q +  L     PRKSLEVFGSP  +  + +  S   ++RL          P
Sbjct: 248 ASNSRNHLVQMQNPLDGEKTPRKSLEVFGSPNPILINTKRNSLTNDKRLIF--------P 299

Query: 317 KMEEIDYSATSGGGIYNDNESDASSDLFEIESLSGKVTP--YLARQKSDVTSGCVTPTTC 374
           KMEEID +         D  SDASSDLFEIESL GK +   +L RQ SD  S C++P  C
Sbjct: 300 KMEEIDNANYDDDDD--DAASDASSDLFEIESLKGKPSNNNFLTRQTSDAASSCLSPN-C 356

Query: 375 YAPSEASIEWSVVTASAADFS----AMSDYEEFRPPPGPLSPIKTFAINNNLNTRFLSSK 430
           YAPSEASIEWSVVTASAA  S     MS++    P   PL P                +K
Sbjct: 357 YAPSEASIEWSVVTASAAVMSDCEDQMSEFTIRSPIRTPLKP--------------KVAK 402

Query: 431 EIIPTCRPGIFLGCNSHKAVRVAGDGYTPNDKTNFDPRVM-----HSYMPVAKCPAETKL 485
           E  P  RPG+ LGC SHKAVRV+GD +   +K +  P++      ++   VA+ P ET  
Sbjct: 403 ET-PRRRPGMLLGCKSHKAVRVSGDAFITYEKQSLSPKISSRNKNNTNSQVARFPGETN- 460

Query: 486 LMGFDHRQRQHGFTSSHSLPRSHPSQSSHLLYI 518
             G     +QHG+T+   L  S+   +S LLYI
Sbjct: 461 -YGAKRHGQQHGYTTP-PLQASNSPHASKLLYI 491


>IMGA|Medtr7g105020.1 phytochrome kinase substrate 1-like protein,
           putative chr07_pseudomolecule_IMGAG_V3 23966932-23965436
           E EGN_Mt090430 20090702
          Length = 498

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 60/130 (46%), Gaps = 30/130 (23%)

Query: 279 PRKSLEVFGSP--VNDDKRSKSFRIERRLSMLSWDTTKNPKMEEIDYSATSGGGIYNDNE 336
           PR+SLEVF  P  +  D ++ +F+    +S +  D                     ND  
Sbjct: 293 PRESLEVFRPPEELTVDTKTLNFQFPPGISRIVIDD--------------------NDAA 332

Query: 337 SDASSDLFEIESLSGKVTP------YLARQKSDVTSGCVTP--TTCYAPSEASIEWSVVT 388
           SDASSDLFEIES S           Y    +     G VT   T CY PSEASI+WSV T
Sbjct: 333 SDASSDLFEIESFSTATQSSYSAAVYRRNSRDSFDEGSVTTAMTDCYEPSEASIDWSVTT 392

Query: 389 ASAADFSAMS 398
           A   D S+++
Sbjct: 393 AEGYDESSIA 402