Jatropha Genome Database

JcCB0121711.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121711.20 - phase: 0 /pseudo/partial
         (216 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g146050.1 Chalcone-flavanone isomerase chr01_pseudomo...    64   7e-11
IMGA|Medtr1g146220.1 Chalcone-flavanone isomerase chr01_pseudomo...    60   6e-10
IMGA|Medtr1g146030.1 Chalcone-flavanone isomerase chr01_pseudomo...    58   4e-09
IMGA|Medtr1g146040.1 Chalcone-flavanone isomerase chr01_pseudomo...    54   8e-08
IMGA|Medtr1g146080.1 Chalcone-flavanone isomerase chr01_pseudomo...    50   8e-07

>IMGA|Medtr1g146050.1 Chalcone-flavanone isomerase
           chr01_pseudomolecule_IMGAG_V3 32195931-32194243 F
           EGN_Mt090430 20090702
          Length = 225

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 52  VKVYAAGLYVNPSILSAL-DTWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGK 110
           VK    G+Y+    +++L   WKG++ +++  +  F+  I +   EK ++   VR ++G 
Sbjct: 48  VKFTGIGIYLEEKAVASLTPKWKGKTPSQLFESLEFYRDIIKGPFEKFIRSTKVRTLEGS 107

Query: 111 TFWDALDDAISPRIKAPTL---VDESALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICV 167
            +   + +     +K+       +E A+  FR  F+D+    GT  F        L +  
Sbjct: 108 EYVRKVSENCIAHMKSEGTYGDAEEKAIQEFREAFKDQFFPPGTAAFYRQSPNGALGLRF 167

Query: 168 SSDG-IPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATILK 216
           S D  IP    A I +  ++ A+ +   G+  VSP+LK S+ T     LK
Sbjct: 168 SKDETIPEHEYAVINNKPLSEAVLETMIGEIPVSPALKESLATRFYEFLK 217


>IMGA|Medtr1g146220.1 Chalcone-flavanone isomerase
           chr01_pseudomolecule_IMGAG_V3 32247023-32245224 E
           EGN_Mt090430 20090702
          Length = 224

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)

Query: 52  VKVYAAGLYVNPSILSALDT-WKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGK 110
           VK  A G+Y+    +  L   WKG+   ++  +  FF  I     EK +++ ++R + G+
Sbjct: 46  VKFTAIGVYLQDIAIPYLAAKWKGKPPHKLTESVPFFMDIVTGPFEKFMRVTMIRPLTGQ 105

Query: 111 TFWDALDD---AISPRIKAPTLVDESALSAFRSVFQDRALKKGTFIFLTWLDPS---KLL 164
            + + + +   AI   +   T  +  A+  F SVF+D     G+ I  T + P     L 
Sbjct: 106 EYSNKVSENCVAIWKSLGIYTNEEAKAIDKFVSVFKDETFPPGSSILFT-VSPKGLGSLT 164

Query: 165 ICVSSDG-IPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATILK 216
           I  S DG IP    A IE+  ++ A+ +   G   VSP+ K S+ + L+ + K
Sbjct: 165 ISFSKDGSIPEVETAVIENKLLSQAVLESMIGAHGVSPAAKQSLASRLSKLFK 217


>IMGA|Medtr1g146030.1 Chalcone-flavanone isomerase
           chr01_pseudomolecule_IMGAG_V3 32179536-32178552 F
           EGN_Mt090430 20090702
          Length = 224

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)

Query: 52  VKVYAAGLYVNPSILSAL-DTWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGK 110
           VK  A G+Y+    +  L + WK +S  E+     FF  I     EK +++ ++  + G 
Sbjct: 46  VKFTAIGVYLQDIAVPYLAEKWKARSAHELTDTVPFFRDIVTGPFEKFMRVTMILPLTGH 105

Query: 111 TFWDALDD---AISPRIKAPTLVDESALSAFRSVFQDRALKKGTFIFLTWLDPS---KLL 164
            + + + +   AI   +   T  +  A+  F SVF+D     G+ I  T + P     L 
Sbjct: 106 QYSEKVSENCVAIWKSLGIYTDEEAKAIDKFVSVFKDETFPPGSSILFT-VSPKGLGSLT 164

Query: 165 ICVSSDG-IPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATILK 216
           I  S DG IP    A IE+  ++ A+ +   G   VSP+ K S+ + L+ + +
Sbjct: 165 ISFSKDGSIPEVETAVIENKLLSQAVLESMIGAHGVSPAAKQSLASRLSRLFR 217


>IMGA|Medtr1g146040.1 Chalcone-flavanone isomerase
           chr01_pseudomolecule_IMGAG_V3 32192781-32189849 E
           EGN_Mt090430 20090702
          Length = 223

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 5/170 (2%)

Query: 52  VKVYAAGLYVNPSILSALD-TWKGQSTAEIHGNAAFFSSIFQAALEKSLQIVLVRDVDGK 110
           VK    G+Y+    +++L   WKG++ +++  +  F+  I +   EK ++   VR ++G 
Sbjct: 48  VKFTGLGVYLEEKAVASLTLKWKGKTPSQLFESLDFYRDIIKGPFEKFIRCTKVRTLEGS 107

Query: 111 TFWDALDDAISPRIKAPTL---VDESALSAFRSVFQDRALKKGTFIFLTWLDPSKLLICV 167
            +   + +     +K        +E A+   R  F+ +    G  +F        L +  
Sbjct: 108 EYVRKVSENCIAHMKFEGTYGDAEEKAIQELREAFKVQFFPPGAGVFFRQSPNGALGLRF 167

Query: 168 SSDG-IPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLATILK 216
           S D  IP      I +  ++ A+ +   G+  VSP+LK S+ T     +K
Sbjct: 168 SKDETIPEHEYVVINNKPLSEAVLETMIGEIPVSPALKESLATRFYEFMK 217


>IMGA|Medtr1g146080.1 Chalcone-flavanone isomerase
           chr01_pseudomolecule_IMGAG_V3 32202558-32201168 F
           EGN_Mt090430 20090702
          Length = 222

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 7/182 (3%)

Query: 41  GYREKVFAIIG--VKVYAAGLYVNPSILSALDT-WKGQSTAEIHGNAAFFSSIFQAALEK 97
           G  E+   I G  +K  A G+Y+    +++L   WKG+++ E+     F+  I     EK
Sbjct: 32  GAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKTSQELLDTLDFYRDIISGPFEK 91

Query: 98  SLQIVLVRDVDGKTFWDALDDAISPRIKAPTL---VDESALSAFRSVFQDRALKKGTFIF 154
            ++   +R++ G  +   + +     +K+       +  A+  F   F+      G  +F
Sbjct: 92  LIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPINFPPGASVF 151

Query: 155 LTWLDPSKLLICVSSD-GIPSSVDATIESANVASALFDVFFGDASVSPSLKASVTTGLAT 213
                   L +  S D  IP    A IE+  V+SA+ +   G+ +VSP LK  +   L  
Sbjct: 152 YRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPA 211

Query: 214 IL 215
           +L
Sbjct: 212 LL 213