Jatropha Genome Database

JcCB0121431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0121431.10 + phase: 0 
         (188 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr6g077210.1 Protein of unknown function DUF588 chr06_ps...    95   2e-20
IMGA|Medtr7g025920.1 Protein of unknown function DUF588 chr07_ps...    86   1e-17
IMGA|Medtr7g025930.1 Protein of unknown function DUF588 chr07_ps...    86   1e-17
IMGA|Medtr7g076970.1 Protein of unknown function DUF588 chr07_ps...    53   1e-07

>IMGA|Medtr6g077210.1 Protein of unknown function DUF588
           chr06_pseudomolecule_IMGAG_V3 15191741-15193080 E
           EGN_Mt090430 20090702
          Length = 177

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 99/173 (57%), Gaps = 8/173 (4%)

Query: 6   ISKALPITTLILRVFAMLLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYMLSAA 65
           +SKA+  + L+LR+  +   +T+V +L T++A F       +  M+ + + SYR++++ A
Sbjct: 2   VSKAVINSMLVLRIITLAASVTTVALLVTNTAKF-----DDDTNMKFQDLISYRFVVAVA 56

Query: 66  VIGIAYTFFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLK 125
            I  AY   QLPF+IY+    KRLI+N     FDF+ DKVI   LA+ +GAGF  + + K
Sbjct: 57  AIAGAYCIVQLPFSIYYAVQQKRLIRNGFLPEFDFYGDKVISALLATAIGAGFAISIEFK 116

Query: 126 ENLDQLDDIFKKLGSNLLSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLLS 178
              DQ   IF   G +     R+  + F+  G V++++LL+ FL   V S+LS
Sbjct: 117 RFFDQ---IFDASGVSKDDATRSTNNKFYVRGIVASSVLLVAFLAMFVVSVLS 166


>IMGA|Medtr7g025920.1 Protein of unknown function DUF588
           chr07_pseudomolecule_IMGAG_V3 6499682-6504056 E
           EGN_Mt090430 20090702
          Length = 187

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 17/165 (10%)

Query: 23  LLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYTFFQLPFAIYH 82
           + LL ++I++     T +      E+  +   I+++RYM+S  VIG AY   Q+  +I+ 
Sbjct: 40  VFLLIALIVIVLTKETLETSFGESEI--KFNDIHAFRYMISTIVIGFAYNLLQMALSIFT 97

Query: 83  ISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLKENLDQLDDIFKKLGSNL 142
           + +G R++       FDFF DK+I  FL SG  AGFGA+ DL         IFK      
Sbjct: 98  VVSGNRVLSGDGGYMFDFFGDKIISYFLLSGSAAGFGASEDLHR-------IFKAG---- 146

Query: 143 LSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLLSFLTLFKRAQ 187
                  ++ FF     S +LLLLGFL   ++S+ +   L +RA+
Sbjct: 147 ----ELPLNSFFGKANASTSLLLLGFLTTAIASIFTSFALPRRAK 187


>IMGA|Medtr7g025930.1 Protein of unknown function DUF588
           chr07_pseudomolecule_IMGAG_V3 6508903-6510962 E
           EGN_Mt090430 20090702
          Length = 179

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 22/167 (13%)

Query: 20  FAMLLLLTSVIILATDSATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYTFFQLPFA 79
           F  LL+   VI+L  ++          E  ++ K I++YRYMLS  VIG AY   Q+  +
Sbjct: 35  FVFLLIAFIVIVLTKETL-------DGESELKFKDIHAYRYMLSTIVIGFAYNCLQMALS 87

Query: 80  IYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLKENLDQLDDIFKKLG 139
           I+ + +G R++   A   FDF+ DK+I  FL SG  AGFGA+ DL       D       
Sbjct: 88  IFSVVSGNRVLNGGAGYKFDFYGDKIISYFLLSGSAAGFGASEDLHRFFKAND------- 140

Query: 140 SNLLSEFRTQMDDFFTMGYVSATLLLLGFLCFGVSSLLSFLTLFKRA 186
                     ++ FF     SA+LLL GFL   ++S+ +   L K+A
Sbjct: 141 --------LPLNSFFGKANASASLLLFGFLTTAIASVFTSFALPKKA 179


>IMGA|Medtr7g076970.1 Protein of unknown function DUF588
           chr07_pseudomolecule_IMGAG_V3 15918121-15920109 E
           EGN_Mt090430 20090702
          Length = 202

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 34/167 (20%)

Query: 14  TLILRVFAMLLLLTSVIILATDS-ATFKALLSSQEVTMRLKYIYSYRYMLSAAVIGIAYT 72
           +L LR   +L  L S I++A++    +K     +E          YRY+L+ A++   YT
Sbjct: 58  SLGLRGIGLLFSLISFIVMASNKHGDWKDFDKYEE----------YRYLLAIAILSSLYT 107

Query: 73  FFQLPFAIYHISTGKRLIKNVAAIYFDFFSDKVILCFLASGVGAGFGATYDLKENLDQLD 132
             Q    ++ +STGK+LIK   A   DFF D+++   L S   +    T  ++E      
Sbjct: 108 GAQAFRQVHELSTGKQLIKPRMAALIDFFGDQIMAYLLISSASSAIPITNRMREG----- 162

Query: 133 DIFKKLGSNLLSEFRTQMDDFFTMGYVSA-TLLLLGFLCFGVSSLLS 178
                             D+ FT    +A ++ +  FLC G S+L+S
Sbjct: 163 -----------------ADNIFTDASAAAISMSVFAFLCLGASALIS 192