Jatropha Genome Database

JcCB0117851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0117851.10 - phase: 1 /partial
         (279 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC235567_58.1 FAD-binding 8 AC235567.1 220615-219064 E EGN_...   305   1e-83
IMGA|Medtr1g126580.1 Fe, putative chr01_pseudomolecule_IMGAG_V3 ...   276   9e-75
IMGA|Medtr1g126550.1 FRO2 homolog, putative chr01_pseudomolecule...   267   5e-72
IMGA|AC235567_55.1 Ferric reductase, NAD binding AC235567.1 2070...   258   2e-69
IMGA|AC235567_63.1 hypothetical protein AC235567.1 237102-236481...    67   1e-11
IMGA|Medtr2g034110.1 ; chr02_pseudomolecule_IMGAG_V3 9473766-946...    65   5e-11

>IMGA|AC235567_58.1 FAD-binding 8 AC235567.1 220615-219064 E
           EGN_Mt090430 20090702
          Length = 365

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 160/283 (56%), Positives = 198/283 (69%), Gaps = 7/283 (2%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPIS 60
           RHD+LVMVSGGSGITP  SIIRE+++ S T KCKTP I LICSFKN+          PIS
Sbjct: 86  RHDTLVMVSGGSGITPFFSIIRELIYLSNTFKCKTPNIVLICSFKNTSCLSMLDLILPIS 145

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXXX 120
           GT    SN+QL+IEAY+TR+KE   +     +T+  KPN    EP+ A+LG  SWLW   
Sbjct: 146 GT-CDISNIQLQIEAYITRDKEFKPDTPIHPQTLWLKPNP-SDEPIHAMLGPNSWLWLGA 203

Query: 121 XXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLWN 180
                           TRYYI+PIDHNTN +FS   R+ LNMLVIC+ IA+ +S AVLWN
Sbjct: 204 IISSSFIIFLIIIGVITRYYIFPIDHNTNAIFSDPLRAFLNMLVICVSIAVVSSVAVLWN 263

Query: 181 KRLNAREGNRIQSNLGPTPTFSP----HNGERELESLPHESLLQAIDVHYGERPDLKRIL 236
           K+ NA+E  +IQ+  G +PT SP    +N +RELESLP++SL++A +VHYG+RPDLKR+L
Sbjct: 264 KQ-NAKEAKQIQNLEGSSPTVSPSSMIYNADRELESLPYQSLVEATNVHYGQRPDLKRLL 322

Query: 237 FECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
           FE K SSVGVLV GPK+MR EVA+ICSS   +NLHFESISF+W
Sbjct: 323 FEMKGSSVGVLVSGPKQMRQEVASICSSGLVENLHFESISFTW 365


>IMGA|Medtr1g126580.1 Fe, putative chr01_pseudomolecule_IMGAG_V3
           28248635-28254413 E EGN_Mt090430 20090702
          Length = 700

 Score =  276 bits (705), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 140/284 (49%), Positives = 184/284 (64%), Gaps = 6/284 (2%)

Query: 1   RHDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPIS 60
           RH+ + MVSGGSGITP ISIIR+++F S   + + P++ L+C FKN           P+S
Sbjct: 418 RHEQIAMVSGGSGITPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYVDLAMLDLMLPVS 477

Query: 61  GTPSAFSNLQLKIEAYVTREKE-PTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXX 119
           G+ +  S L L+IEAY+TREKE P+ +    I+TI  K N L   P+SAVLG  +WLW  
Sbjct: 478 GSTTQISQLPLQIEAYITREKEEPSRDTQKQIQTIWFKTN-LSDSPISAVLGPNNWLWLG 536

Query: 120 XXXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLW 179
                            TRYYIYPI++NT EV++++ +    M ++C  + + +S   LW
Sbjct: 537 AIITSSFIMFLLLLGIVTRYYIYPIENNTGEVYNWTSKVMWYMFLLCACVCICSSVVFLW 596

Query: 180 NKRLNAREGNRIQSNLGPTPTFSP----HNGERELESLPHESLLQAIDVHYGERPDLKRI 235
            KR N  E  +I +   PTPT SP    +  ERELESLPH+SLLQA +VH+G RPDLK+I
Sbjct: 597 CKRQNTIENKQIMNVEVPTPTRSPGSWIYGSERELESLPHQSLLQATNVHFGARPDLKKI 656

Query: 236 LFECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
           LFECK   VGV+VCGP+K+RHEVA IC+S  ADNLHFESISF+W
Sbjct: 657 LFECKDKDVGVMVCGPRKLRHEVAKICASGLADNLHFESISFNW 700


>IMGA|Medtr1g126550.1 FRO2 homolog, putative
           chr01_pseudomolecule_IMGAG_V3 28235927-28237344 E
           EGN_Mt090430 20090702
          Length = 290

 Score =  267 bits (682), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 138/283 (48%), Positives = 179/283 (63%), Gaps = 6/283 (2%)

Query: 2   HDSLVMVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPISG 61
           H+ +VMVSGGSG+TP ISIIR+++F S   + + P++ L+C FKN           PISG
Sbjct: 9   HEQIVMVSGGSGVTPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYADLTMLDLMLPISG 68

Query: 62  TPSAFSNLQLKIEAYVTREK-EPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXXX 120
             +  S LQL+IEAY+TREK EP+ +    I+TI  K N L   P+SAVLG  +WLW   
Sbjct: 69  LKTRISQLQLQIEAYITREKQEPSKDTQKQIQTIWFKTN-LSDCPISAVLGPNNWLWLGA 127

Query: 121 XXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLWN 180
                           TRYYIYPI++N+ EV+++++     M   C  I + +S   LW 
Sbjct: 128 IITSSFVMFLLFLGIVTRYYIYPIENNSGEVYNWTYGVMWYMFSFCSCICICSSVVFLWL 187

Query: 181 KRLNAREGNRIQSNLGPTPTFSP----HNGERELESLPHESLLQAIDVHYGERPDLKRIL 236
           KRLN  E   I +    TP  SP    +  ERELESLPH+SL+QA +VH+G RPDLK+IL
Sbjct: 188 KRLNKLENKHIMNVEVSTPARSPGSWIYGSERELESLPHQSLVQATNVHFGSRPDLKKIL 247

Query: 237 FECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
           FEC+   VGV+ CGP+KMRHEVA IC+S  ADNLHFESISF+W
Sbjct: 248 FECEGKDVGVMTCGPRKMRHEVARICASGLADNLHFESISFNW 290


>IMGA|AC235567_55.1 Ferric reductase, NAD binding AC235567.1
           207092-205951 E EGN_Mt090430 20090702
          Length = 268

 Score =  258 bits (659), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 188/277 (67%), Gaps = 13/277 (4%)

Query: 7   MVSGGSGITPLISIIREVLFASTTDKCKTPQITLICSFKNSXXXXXXXXXXPISGTPSAF 66
           MVSGGSGITP ISIIRE+++ STT KCKTP I LI SFKN+          PISGTPS  
Sbjct: 1   MVSGGSGITPFISIIRELIYLSTTFKCKTPNIVLISSFKNTSCLSMLDLILPISGTPSDI 60

Query: 67  SNLQLKIEAYVTREKEPTINNWNLIRTIRSKPNSLIGEPVSAVLGGKSWLWXXXXXXXXX 126
           SN+QL+IEAY+TR++E   ++    +T+  KPN     P+ ++LG  +WLW         
Sbjct: 61  SNIQLQIEAYITRDREFKSDSSIHPQTLWFKPNP-TDAPIHSMLGPNTWLWLGAIISSSF 119

Query: 127 XXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAAVLWNKRLNAR 186
                     TRYYI+PIDHNTN++FSY  R  LN+LVIC+ + + AS AV+WNK+ NA+
Sbjct: 120 IIFLIIIGIITRYYIFPIDHNTNKIFSYPLRVFLNVLVICVSVVVVASVAVIWNKKQNAK 179

Query: 187 EGNRIQSNLGPTPTFSP----HNGERELESLPHESLLQAIDVHYGERPDLKRILFECKSS 242
           E  +IQ+  G +PT SP    +N +RELESLP++SL+QA +VHYG RPDLK        S
Sbjct: 180 EAKQIQNLEGSSPTVSPSSMIYNVDRELESLPYQSLVQATNVHYGTRPDLK--------S 231

Query: 243 SVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
           +VGVLV GPK+MR EVA+ICSS   +NLHFESISF+W
Sbjct: 232 NVGVLVSGPKQMRQEVASICSSGLVENLHFESISFTW 268


>IMGA|AC235567_63.1 hypothetical protein AC235567.1 237102-236481 E
           EGN_Mt090430 20090702
          Length = 103

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 37/48 (77%)

Query: 232 LKRILFECKSSSVGVLVCGPKKMRHEVATICSSRSADNLHFESISFSW 279
            + +L E K SSVGVLV G K+MRHEVA ICSS   +N+HFESISF+W
Sbjct: 56  FRGLLIEMKGSSVGVLVSGSKQMRHEVAFICSSGLVENMHFESISFTW 103


>IMGA|Medtr2g034110.1 ; chr02_pseudomolecule_IMGAG_V3
           9473766-9466751 F EGN_Mt090430 20090702
          Length = 740

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 39/300 (13%)

Query: 2   HDSLVMVSGGSGITPLISIIREVLFASTTDK-CKTPQITLICSFKNSXXXXXXXXXXPIS 60
           +++L++V+GG G++P ++I+ ++L      K C+   I ++ + K S            +
Sbjct: 456 YENLILVAGGIGLSPFLAILSDILHRVREGKPCRPRNILIVWAVKKSNELPLLSTVDMET 515

Query: 61  GTPSAFSNLQLKIEAYVTREKEPTIN---NWNLIRTIRSKPN-SLIGEPVSAVLGGKSWL 116
             P     + + +  +VTRE +P +    N+  I+++   P  S  G  +S ++G  +  
Sbjct: 516 ICPCFSDKVNINVHIFVTRESDPPLEEGYNYKPIKSLCPFPMPSDYG--MSGLVGTGNNF 573

Query: 117 WXXXXXXXXXXXXXXXXXXXTRYYIYPIDHNTNEVFSYSFRSSLNMLVICIGIAMTASAA 176
           W                     YYI P+      V  + ++  L  LV+C+  ++     
Sbjct: 574 WSGLYVISSTLGFVILLALLNIYYINPVG-----VVIWWYKGLL--LVVCMVASVVIFGG 626

Query: 177 V------LWNKRLNARE-GNRIQSNLGPTPTFSPHNGERELESLPHESLLQAIDVHYGER 229
           +      +W K+ + ++  N I+ +          NG  + + L   ++ +   + YG R
Sbjct: 627 IVVGFWNMWEKQSSLKDKSNNIKVDK------IEQNGSVDHKDLTQYNIAKLTTIRYGSR 680

Query: 230 PDLKRILFECKSS-----SVGVLVCGPKKMRHEVATICSSRSADN------LHFESISFS 278
           PD K I FE  S       VG+LVCGP  ++  VA    S S          HF S SF 
Sbjct: 681 PDFKEI-FESMSEKWGHVDVGILVCGPPTLQSSVAQEIRSHSLTRQPYHPIFHFHSHSFD 739