Jatropha Genome Database

JcCB0115521.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115521.20 + phase: 0 /partial/short
         (38 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g009920.1 Trehalose-phosphatase chr03_pseudomolecule_...    59   4e-10
IMGA|Medtr3g009920.2 Trehalose-phosphatase chr03_pseudomolecule_...    59   4e-10
IMGA|Medtr8g106220.1 Trehalose-phosphatase chr08_pseudomolecule_...    55   1e-08
IMGA|Medtr3g124490.1 Trehalose-phosphatase chr03_pseudomolecule_...    51   1e-07

>IMGA|Medtr3g009920.1 Trehalose-phosphatase
           chr03_pseudomolecule_IMGAG_V3 1595994-1600747 E
           EGN_Mt090430 20090702
          Length = 388

 Score = 59.3 bits (142), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 32/38 (84%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
           VL E NKG+GILVSS PKE+NA YSL DP+EVM+FL S
Sbjct: 341 VLSEVNKGFGILVSSAPKESNAVYSLCDPSEVMEFLKS 378


>IMGA|Medtr3g009920.2 Trehalose-phosphatase
           chr03_pseudomolecule_IMGAG_V3 1595994-1600747 E
           EGN_Mt090430 20090702
          Length = 319

 Score = 59.3 bits (142), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 32/38 (84%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLNS 38
           VL E NKG+GILVSS PKE+NA YSL DP+EVM+FL S
Sbjct: 272 VLSEVNKGFGILVSSAPKESNAVYSLCDPSEVMEFLKS 309


>IMGA|Medtr8g106220.1 Trehalose-phosphatase
           chr08_pseudomolecule_IMGAG_V3 23711463-23713839 E
           EGN_Mt090430 20090702
          Length = 391

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 30/37 (81%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
           VLRE N+G GILVSS  K++NA YSLRD +EVM+FL 
Sbjct: 339 VLRESNRGCGILVSSVRKDSNALYSLRDTSEVMRFLQ 375


>IMGA|Medtr3g124490.1 Trehalose-phosphatase
           chr03_pseudomolecule_IMGAG_V3 31575093-31578089 H
           EGN_Mt090430 20090702
          Length = 366

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 31/37 (83%)

Query: 1   VLREGNKGYGILVSSTPKETNAFYSLRDPTEVMKFLN 37
           V++   +GY I+VSSTP+ET+A YSLRDP+EV+ FL+
Sbjct: 311 VIKRMGQGYPIIVSSTPRETDALYSLRDPSEVLIFLS 347