Jatropha Genome Database

JcCB0115521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115521.10 - phase: 0 
         (146 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g070980.1 Plant lipid transfer/seed storage/trypsin-a...    92   9e-20
IMGA|Medtr7g070950.1 Plant lipid transfer/seed storage/trypsin-a...    86   5e-18
IMGA|Medtr7g070940.1 Plant lipid transfer/seed storage/trypsin-a...    65   2e-11

>IMGA|Medtr7g070980.1 Plant lipid transfer/seed
           storage/trypsin-alpha amylase inhibitor
           chr07_pseudomolecule_IMGAG_V3 14515916-14514077 E
           EGN_Mt090430 20090702
          Length = 117

 Score = 92.0 bits (227), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 6/109 (5%)

Query: 37  CLATFLALLIASNAFIGDVNAAGECGK-TPIRSAAISLNPCLLAAGNAKASVPPACCSKV 95
           CL  F+ L+    A I  V +AGECG+ T     A  L PC  AA +  ASV   CC++ 
Sbjct: 9   CLVGFVVLV----AGIHSVESAGECGRGTTPDMEAFKLAPCASAAQDENASVSQTCCAQT 64

Query: 96  GALINTAPKCLCAIILSPLAKQSGINPGIAITIPKRCNIKNRPAGKKCG 144
             L    P CLCA++LS +AK SG+NP IA+TIPKRCN  NRP G KCG
Sbjct: 65  KKL-GQNPSCLCAVLLSNVAKMSGVNPQIAVTIPKRCNFANRPVGYKCG 112


>IMGA|Medtr7g070950.1 Plant lipid transfer/seed
           storage/trypsin-alpha amylase inhibitor
           chr07_pseudomolecule_IMGAG_V3 14492193-14491064 F
           EGN_Mt090430 20090702
          Length = 117

 Score = 86.3 bits (212), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 5/104 (4%)

Query: 42  LALLIASNAFIGDVNAAGECGK-TPIRSAAISLNPCLLAAGNAKASVPPACCSKVGALIN 100
           +A+L+A       V +AGECG+ T   + A  L PC  AA +  ASV  +CC++V  L  
Sbjct: 13  IAVLVAGTH---RVESAGECGRGTTPDNEAFKLIPCASAAKDENASVSQSCCAQVKKL-G 68

Query: 101 TAPKCLCAIILSPLAKQSGINPGIAITIPKRCNIKNRPAGKKCG 144
             P CLCA++LS +AK SG NP IA+TIPKRCN+ +RP G KCG
Sbjct: 69  QNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCG 112


>IMGA|Medtr7g070940.1 Plant lipid transfer/seed
           storage/trypsin-alpha amylase inhibitor
           chr07_pseudomolecule_IMGAG_V3 14490537-14489348 E
           EGN_Mt090430 20090702
          Length = 99

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)

Query: 92  CSKVGALINTAPKCLCAIILSPLAKQSGINPGIAITIPKRCNIKNRPAGKKCG 144
           C++V  L    P CLCA++LS +AK SG+NP IA TIPKRCN+ +RP G KCG
Sbjct: 43  CAQVKKL-GQNPSCLCAVLLSNVAKMSGVNPQIASTIPKRCNLADRPVGYKCG 94