Jatropha Genome Database
- JcCB0115461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0115461.10 - phase: 0 /partial
(340 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g029700.1 Fumarylacetoacetase; chr02_pseudomolecule_I... 597 e-171
IMGA|Medtr2g029700.2 Fumarylacetoacetase; chr02_pseudomolecule_I... 540 e-154
>IMGA|Medtr2g029700.1 Fumarylacetoacetase;
chr02_pseudomolecule_IMGAG_V3 7967082-7971788 F
EGN_Mt090430 20090702
Length = 421
Score = 597 bits (1539), Expect = e-171, Method: Compositional matrix adjust.
Identities = 275/338 (81%), Positives = 311/338 (92%)
Query: 3 LKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPILKG 62
L+SFI V+PDSHFPIQNLPYG+FKPQPSS PRP VAIG++VLDLSEI+ AGLF+GP+L
Sbjct: 4 LQSFIQVNPDSHFPIQNLPYGIFKPQPSSSPRPGVAIGEFVLDLSEISSAGLFNGPLLNN 63
Query: 63 SDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELLVP 122
SDCFLQLNLNKFV++GRPAWKEARATLQKLLSS+EPTLRDNA LRQKSLV +S+VE+L+P
Sbjct: 64 SDCFLQLNLNKFVSLGRPAWKEARATLQKLLSSSEPTLRDNAVLRQKSLVPLSQVEMLLP 123
Query: 123 IAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRPRG 182
+ +GDYTDFFSS+HH KNCG IFRGPQ P+ NW+HLP+AYHGRASS+V+SGTD+VRPRG
Sbjct: 124 VVVGDYTDFFSSLHHTKNCGLIFRGPQTPVLENWYHLPVAYHGRASSVVVSGTDVVRPRG 183
Query: 183 QGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSARD 242
Q HP GN PYFGP++KLDFELEMA++VGPGNELGKPVDVN A DHIFGLVL+NDWSARD
Sbjct: 184 QAHPAGNPSPYFGPTLKLDFELEMASIVGPGNELGKPVDVNNAEDHIFGLVLLNDWSARD 243
Query: 243 IQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDIS 302
IQAWEYVPLGPFLGK+F TTISPWIVTLDALEPFAC+APKQDP PLPYLAEK+SKNYD+S
Sbjct: 244 IQAWEYVPLGPFLGKNFATTISPWIVTLDALEPFACEAPKQDPPPLPYLAEKVSKNYDLS 303
Query: 303 LEVQIKPTGQEDSTVVTRSNFKHLYWTLTQQLAHHTIN 340
LEV IKP +DS++VTRSN KHLYWTLTQQLAHHTIN
Sbjct: 304 LEVHIKPVNHKDSSIVTRSNLKHLYWTLTQQLAHHTIN 341
>IMGA|Medtr2g029700.2 Fumarylacetoacetase;
chr02_pseudomolecule_IMGAG_V3 7967082-7971788 F
EGN_Mt090430 20090702
Length = 327
Score = 540 bits (1392), Expect = e-154, Method: Compositional matrix adjust.
Identities = 248/303 (81%), Positives = 281/303 (92%)
Query: 3 LKSFIDVHPDSHFPIQNLPYGVFKPQPSSPPRPAVAIGDYVLDLSEIALAGLFDGPILKG 62
L+SFI V+PDSHFPIQNLPYG+FKPQPSS PRP VAIG++VLDLSEI+ AGLF+GP+L
Sbjct: 4 LQSFIQVNPDSHFPIQNLPYGIFKPQPSSSPRPGVAIGEFVLDLSEISSAGLFNGPLLNN 63
Query: 63 SDCFLQLNLNKFVAMGRPAWKEARATLQKLLSSTEPTLRDNASLRQKSLVLMSKVELLVP 122
SDCFLQLNLNKFV++GRPAWKEARATLQKLLSS+EPTLRDNA LRQKSLV +S+VE+L+P
Sbjct: 64 SDCFLQLNLNKFVSLGRPAWKEARATLQKLLSSSEPTLRDNAVLRQKSLVPLSQVEMLLP 123
Query: 123 IAIGDYTDFFSSMHHAKNCGTIFRGPQNPIPANWFHLPIAYHGRASSIVISGTDIVRPRG 182
+ +GDYTDFFSS+HH KNCG IFRGPQ P+ NW+HLP+AYHGRASS+V+SGTD+VRPRG
Sbjct: 124 VVVGDYTDFFSSLHHTKNCGLIFRGPQTPVLENWYHLPVAYHGRASSVVVSGTDVVRPRG 183
Query: 183 QGHPTGNSPPYFGPSMKLDFELEMAAVVGPGNELGKPVDVNEAGDHIFGLVLMNDWSARD 242
Q HP GN PYFGP++KLDFELEMA++VGPGNELGKPVDVN A DHIFGLVL+NDWSARD
Sbjct: 184 QAHPAGNPSPYFGPTLKLDFELEMASIVGPGNELGKPVDVNNAEDHIFGLVLLNDWSARD 243
Query: 243 IQAWEYVPLGPFLGKSFGTTISPWIVTLDALEPFACDAPKQDPQPLPYLAEKISKNYDIS 302
IQAWEYVPLGPFLGK+F TTISPWIVTLDALEPFAC+APKQDP PLPYLAEK+SKNYD+S
Sbjct: 244 IQAWEYVPLGPFLGKNFATTISPWIVTLDALEPFACEAPKQDPPPLPYLAEKVSKNYDLS 303
Query: 303 LEV 305
LEV
Sbjct: 304 LEV 306