Jatropha Genome Database
- JcCB0114361.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0114361.10 - phase: 0 /pseudo
(345 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g139160.2 Cullin; Winged helix repressor DNA-binding ... 139 2e-33
IMGA|Medtr8g139160.1 Cullin; Winged helix repressor DNA-binding ... 139 2e-33
IMGA|Medtr7g130070.1 Cullin; Winged helix repressor DNA-binding ... 128 4e-30
IMGA|Medtr8g139060.1 Cullin chr08_pseudomolecule_IMGAG_V3 338223... 82 5e-16
IMGA|Medtr8g138710.1 Cullin chr08_pseudomolecule_IMGAG_V3 336135... 80 1e-15
IMGA|Medtr8g139110.1 Cullin chr08_pseudomolecule_IMGAG_V3 338324... 80 2e-15
IMGA|Medtr8g139140.1 Cullin chr08_pseudomolecule_IMGAG_V3 338646... 75 6e-14
IMGA|Medtr5g040920.1 Cullin chr05_pseudomolecule_IMGAG_V3 174874... 53 2e-07
IMGA|Medtr5g041040.1 Cullin chr05_pseudomolecule_IMGAG_V3 175543... 52 6e-07
IMGA|Medtr5g041050.1 Cullin chr05_pseudomolecule_IMGAG_V3 175613... 51 7e-07
>IMGA|Medtr8g139160.2 Cullin; Winged helix repressor DNA-binding
chr08_pseudomolecule_IMGAG_V3 33872362-33880475 E
EGN_Mt090430 20090702
Length = 632
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 147/285 (51%), Gaps = 16/285 (5%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSKN- 77
E+G + +++ K I EG F+ M +Y +YN+CTQK N
Sbjct: 12 EQGWDFMHRGIMKLKNILEGLPEPQFSPEDYMMLY-----------TTIYNMCTQKPPND 60
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+ +Y+KY EE+I+ V+P L KH +L E+ + W+ K +F +LDR
Sbjct: 61 YSQPLYDKYKEAFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDR 120
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+++ RR L + F LV L+G++++AI+SLI QER+G+ IDR LLK V
Sbjct: 121 YFIARRSLPPLNEVGLACFRDLVYKELHGKMRDAIISLIDQEREGEQIDRALLKNVLDIF 180
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G ++YE FE ML + +AYYS + W DS +Y+ K + CL +E R
Sbjct: 181 VEIGMGKMDHYENDFEADMLKDTSAYYSRKASN-WILEDSCPDYMLKAEECLRREKDRVA 239
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
Y + +++ KLL ++ LL A++ + + + + DDK +
Sbjct: 240 HYLHSSSEPKLLEKVQNELLSVYASQLLEKEHSGCHALLRDDKCE 284
>IMGA|Medtr8g139160.1 Cullin; Winged helix repressor DNA-binding
chr08_pseudomolecule_IMGAG_V3 33872362-33880475 E
EGN_Mt090430 20090702
Length = 744
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 147/285 (51%), Gaps = 16/285 (5%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSKN- 77
E+G + +++ K I EG F+ M +Y +YN+CTQK N
Sbjct: 12 EQGWDFMHRGIMKLKNILEGLPEPQFSPEDYMMLY-----------TTIYNMCTQKPPND 60
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+ +Y+KY EE+I+ V+P L KH +L E+ + W+ K +F +LDR
Sbjct: 61 YSQPLYDKYKEAFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDR 120
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+++ RR L + F LV L+G++++AI+SLI QER+G+ IDR LLK V
Sbjct: 121 YFIARRSLPPLNEVGLACFRDLVYKELHGKMRDAIISLIDQEREGEQIDRALLKNVLDIF 180
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G ++YE FE ML + +AYYS + W DS +Y+ K + CL +E R
Sbjct: 181 VEIGMGKMDHYENDFEADMLKDTSAYYSRKASN-WILEDSCPDYMLKAEECLRREKDRVA 239
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
Y + +++ KLL ++ LL A++ + + + + DDK +
Sbjct: 240 HYLHSSSEPKLLEKVQNELLSVYASQLLEKEHSGCHALLRDDKCE 284
>IMGA|Medtr7g130070.1 Cullin; Winged helix repressor DNA-binding
chr07_pseudomolecule_IMGAG_V3 30317649-30310489 E
EGN_Mt090430 20090702
Length = 714
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 23/285 (8%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSK-N 77
E G+KK+ K I EG FT+ + M +Y +YN+CTQK +
Sbjct: 2 ENGIKKL-------KRILEGLPETQFTSEEYMMLY-----------TTIYNMCTQKPPLD 43
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+++Y+KY +E+I V+ + KH +L E+ + W K +F +LDR
Sbjct: 44 YSQQLYDKYKEVFDEYIRSTVLSAVRDKHDEFMLRELVQRWLNHKVLVRWLSRFFHYLDR 103
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
++V RR L F LV + +A++ LI +ER+G+ IDR+LLK V
Sbjct: 104 YFVARRSLPPLNAVGLSAFRDLVYMEVRVNAMKAVIVLIDKEREGEQIDRSLLKNVLDIF 163
Query: 198 GPEGKGATNYYEK-FEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAE 256
G G +YE FE ML + A YY + W DS +Y+ K + CL +E R
Sbjct: 164 VEIGMGEMAFYESDFEAHMLEDTADYYKSKAT-IWIESDSCPDYMLKAEDCLRRERDRVS 222
Query: 257 VYPYKTTKEKLLNVIKYILLERNANRWAQNQKA--QGVTADDKVD 299
Y + TT++KL+ +++ LL AN+ + + + + + DDKVD
Sbjct: 223 HYLHSTTEQKLVEKVQHELLVNRANQLLEKEHSGCRALLRDDKVD 267
>IMGA|Medtr8g139060.1 Cullin chr08_pseudomolecule_IMGAG_V3
33822305-33823901 E EGN_Mt090430 20090702
Length = 211
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 13/208 (6%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKS-KN 77
E+G + + + + I EG FT+ ++ +Y VYN+CTQK +
Sbjct: 8 EQGWSIMQKGIKKLQNILEGFPEPHFTSEEHTLLY-----------TTVYNMCTQKPPHD 56
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YS+ +YEKY +++I+ V+P L GK LL E+ WS K KF +LDR
Sbjct: 57 YSQPLYEKYKETFQDYIVSTVLPSLRGKKDELLLRELLGRWSIHKTMTKCLSKFFHYLDR 116
Query: 138 WYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFM 197
+++ R+ SL + F LV ++ ++ +AI+++I ++ G+ ID L+ F
Sbjct: 117 YFIGRQRLPSLEEIGLLSFYDLVYVEMHREVMDAILAMIDRKWAGEPIDETLVHNALTFY 176
Query: 198 GPEGKG-ATNYYEKFEQIMLAEAAAYYS 224
G+ N + F + + E A +Y+
Sbjct: 177 SEIGESTGKNDPKHFAETTIKENATFYT 204
>IMGA|Medtr8g138710.1 Cullin chr08_pseudomolecule_IMGAG_V3
33613533-33616737 H EGN_Mt090430 20090702
Length = 206
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 62 SISCCVYNLCTQKSKN-YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSE 120
++S +Y +CTQK + YSE++YEKY + +I V+P L K LL E+ E WS
Sbjct: 41 TLSTTIYVMCTQKPPHEYSEQLYEKYKETFDGYIKSTVLPSLREKKDELLLRELLERWSN 100
Query: 121 FKAFADSSYKFVEFLDRWYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQER 180
K + +L ++++ +R +SL + F LV D ++ Q+ +AI+++I ++R
Sbjct: 101 HKIMTKLLSRIFRYLHKYHIRKRGLSSLEETGFLSFYYLVYDEMHRQVMDAILAMIDRKR 160
Query: 181 KGKDIDRNLLKTVFGFMGPEGKGA-TNYYEKFEQIMLAEAAAYYS 224
G+ ID+ L+ F G+ N + F + M E AA+Y+
Sbjct: 161 AGEPIDQTLVNNALAFYSEIGESTRKNDPKHFAETMTKEYAAFYT 205
>IMGA|Medtr8g139110.1 Cullin chr08_pseudomolecule_IMGAG_V3
33832475-33837483 E EGN_Mt090430 20090702
Length = 211
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 67 VYNLCTQK-SKNYSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFA 125
+Y +C+QK +YS +Y+KY EE+I V+P L GK LL E+ + WS K
Sbjct: 45 IYRMCSQKLPHDYSMILYDKYKEVFEEYIKSTVLPSLRGKKDELLLRELVQRWSNQKTMT 104
Query: 126 DSSYKFVEFLDRWYVPRREYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDI 185
+ +LDR+++ RR SL + F LV ++ Q+ + I+++I ++R G I
Sbjct: 105 RCLSRCFHYLDRYFIKRRGLNSLEETAFLSFYNLVYVEMHHQVMQTIIAMIDRKRAGGPI 164
Query: 186 DRNLLKTVFGFMGPEG--KGATNYYEKFEQIMLAEAAAYYS 224
D L+ F G G T+ + F + + E AA YS
Sbjct: 165 DEILINNALNFYSEIGDRTGKTD-PKHFAETFIKENAAIYS 204
>IMGA|Medtr8g139140.1 Cullin chr08_pseudomolecule_IMGAG_V3
33864666-33866989 H EGN_Mt090430 20090702
Length = 264
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 19 EEGLKKIDDAMLRKKMIAEGRSVLPFTTAQNMEIYEYPSHIMPSISCCVYNLCTQKSKN- 77
EEG + D + I EG FT+ M +Y +Y +CTQ+ +
Sbjct: 43 EEGWNVMQDGI---NNILEGLPEPQFTSDGYMILY-----------TTIYTMCTQRPPHE 88
Query: 78 YSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDR 137
YSE++YEKY EE+I V+P L LL E+ WS K + +LDR
Sbjct: 89 YSEQLYEKYKETFEEYIKSTVLPSLRENKDELLLRELLIRWSNHKIMTKLLSRIFCYLDR 148
Query: 138 WYVPRR-EYTSLVDAPRRYFCILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGF 196
+++PR+ SL + F LV D + Q+ +AI+++I + G+ ID+ L+ F
Sbjct: 149 FHIPRKWGLPSLEETGFLSFYHLVYDEVKKQVMDAILAMIDWRQAGEPIDQTLVNNALAF 208
Query: 197 MGPEGKGA-TNYYEKFEQIMLAEAAAYYSELSMEW 230
G+ N + F + M+ E + +Y + W
Sbjct: 209 YSEIGESTRRNDPKHFAETMIKEKSTFYYDEGSNW 243
>IMGA|Medtr5g040920.1 Cullin chr05_pseudomolecule_IMGAG_V3
17487463-17483711 E EGN_Mt090430 20090702
Length = 437
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 115/239 (48%), Gaps = 16/239 (6%)
Query: 52 IYEYPSHIMPSISCC-----VYNLCTQKSKNYSEEIYEKYLNYLEEWIMDKVIPRLL-GK 105
I++ +H + +IS YN+ K + E++Y + + K I R L
Sbjct: 33 IHDLYNHNVRNISFAELYRNAYNMVVHK---FGEKLYSGLVATTTSHL--KEIARSLEAT 87
Query: 106 HGAALLTEVTESWSEFKAFADSSYKFVEFLDRWYVPRREYTSLVDAPRRYFC--ILVCDR 163
G++ L E+ W++ + ++D+ Y+P+ + T + + + ++ +
Sbjct: 88 EGSSFLEELNRKWNDHNKALRMINDILMYVDKIYIPQTKKTHIYELGLNLWTENVIYSKQ 147
Query: 164 LYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFMGPEGKGATNYYEKFEQIMLAEAAAYY 223
+ ++ ++ L+ +ER G+D++ L+K + + G++ Y ++FE L +A +Y
Sbjct: 148 IRTRLSNMLLELVCKERAGEDVNIELIKNITKMLMD--LGSSVYEQEFETSFLQVSAEFY 205
Query: 224 SELSMEWWFWRDSFTNYLQKVDWCLIQEGARAEVYPYKTTKEKLLNVIKYILLERNANR 282
S ++ D +YL+KV+ CL +E R Y +T++K+ +VI+ ++E + R
Sbjct: 206 RAESQKFIECCDC-GDYLKKVERCLNEETDRMCHYFDPSTEKKITSVIEKEMIENHMLR 263
>IMGA|Medtr5g041040.1 Cullin chr05_pseudomolecule_IMGAG_V3
17554357-17551866 E EGN_Mt090430 20090702
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 94/203 (46%), Gaps = 7/203 (3%)
Query: 77 NYSEEIYEKYLNYLEEWIMDKVIPRLLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLD 136
N+ E++Y + + + + + L G + L E W+++ + +++
Sbjct: 52 NFGEKLYSGLVTTMTSHLRE-IARSLEDTQGISFLEEFNTKWNDYNKSLAFLRDILRYME 110
Query: 137 RWYVPRREYTSLVDAPRRYF--CILVCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVF 194
R Y+P + T + + + ++ +++ ++ ++ + +ER G+D++R L++ V
Sbjct: 111 RTYIPSTKKTPVYELGLNLWRENVIYSNQIRTRLSNTLLEFVFKERAGEDVNRELIRNVT 170
Query: 195 GFMGPEGKGATNYYEKFEQIMLAEAAAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGAR 254
+ G Y ++FE L A Y S ++ D +YL+KV+ CL +E R
Sbjct: 171 KMLIDLGPSV--YEQEFETPFLQVLAESYKAESEKYIECCDC-EDYLKKVERCLTEETDR 227
Query: 255 AEVYPYKTTKEKLLNVIKYILLE 277
KT K K++N I+ ++E
Sbjct: 228 IHYLDPKTEK-KIINAIEKEMIE 249
>IMGA|Medtr5g041050.1 Cullin chr05_pseudomolecule_IMGAG_V3
17561348-17557433 E EGN_Mt090430 20090702
Length = 295
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 102 LLGKHGAALLTEVTESWSEFKAFADSSYKFVEFLDRWYVPRREYTSLVDAPRRYF--CIL 159
L G++ + E+ W+++ + +++R Y+P + T + + + ++
Sbjct: 37 LEATQGSSFMEELNTKWNDYYKSLPFLSDILRYMERTYIPSTKKTPVYELGLNLWRENVI 96
Query: 160 VCDRLYGQIQEAIMSLIIQERKGKDIDRNLLKTVFGFMGPEGKGATNYYEKFEQIMLAEA 219
+++ ++ ++ + +ER G+D++R L++ V + G Y + FE L
Sbjct: 97 YSNQIRTRLSNTLLEFVFKERAGEDVNRELIRNVTKMLMDLGPSV--YEQVFETPFLQVL 154
Query: 220 AAYYSELSMEWWFWRDSFTNYLQKVDWCLIQEGARAEVYPYKTTKEKLLNVIKYILLE 277
A Y S ++ D +YL+KV+ CL +E R KT K K++N I+ ++E
Sbjct: 155 AESYKAESQKYIKCFDC-GDYLKKVERCLNEETDRVHYLDPKTEK-KIINAIEKEMIE 210