Jatropha Genome Database

JcCB0113601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0113601.10 + phase: 0 
         (269 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g137480.1 Ribose 5-phosphate isomerase chr01_pseudomo...   382   e-106
IMGA|Medtr7g140770.1 Ribose 5-phosphate isomerase chr07_pseudomo...   299   1e-81
IMGA|Medtr1g074140.1 Ribose 5-phosphate isomerase; Homeodomain-l...   114   5e-26
IMGA|Medtr2g036830.1 Ribose 5-phosphate isomerase chr02_pseudomo...    98   3e-21
IMGA|Medtr2g036830.2 Ribose 5-phosphate isomerase chr02_pseudomo...    65   4e-11

>IMGA|Medtr1g137480.1 Ribose 5-phosphate isomerase
           chr01_pseudomolecule_IMGAG_V3 30487780-30484981 E
           EGN_Mt090430 20090702
          Length = 268

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/270 (74%), Positives = 228/270 (84%), Gaps = 3/270 (1%)

Query: 1   MAIPCQPLIGSEKLSMEAGPLSPMAPISQPPVILTQDELKKIAAYKAVDFVQSGMVLGLG 60
           MAIPC   I S K +MEAG L P +P S   VIL+QD+LKKIAAYKAV++V+SGMVLGLG
Sbjct: 1   MAIPCPHFISSAKAAMEAGLLIPSSPSSSVSVILSQDDLKKIAAYKAVEYVESGMVLGLG 60

Query: 61  TGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQALSLGIPLSDLDSHPNVDLAIDGA 120
           TGSTAKHAV RI +L+ QGKLKNIIGIPTS  TH+QA+SLGIPLSDLDSHP +DLAIDGA
Sbjct: 61  TGSTAKHAVARIGELIRQGKLKNIIGIPTSTITHEQAVSLGIPLSDLDSHPVIDLAIDGA 120

Query: 121 DEVDSDLNLVKGRGGSLLREKMIESACKKFVVIVDESKLVPHIGANG-AMPVEVVPFCWK 179
           DEVD  LNLVKGRGGSLLREKM+E ACKKFV IVDESKLV ++G +G AMPVEV+ FCWK
Sbjct: 121 DEVDPYLNLVKGRGGSLLREKMVEGACKKFVCIVDESKLVNYLGGSGLAMPVEVIRFCWK 180

Query: 180 FTQERLQEMFGYADCLAKLRRNGDSESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAILR 239
           FT  RLQ +F  + C+AKLR +G  E GEP+VTDNGNYIVDL+FKK IGDL+ ASDAIL 
Sbjct: 181 FTAGRLQNLFEESGCVAKLRTSG--EKGEPYVTDNGNYIVDLYFKKSIGDLRVASDAILN 238

Query: 240 LAGVVEHGMFLGMATTVIVAGEFGVTMKNK 269
           +AGVVEHGMFL MATTVIVAGE G+T+K+K
Sbjct: 239 IAGVVEHGMFLDMATTVIVAGELGLTVKSK 268


>IMGA|Medtr7g140770.1 Ribose 5-phosphate isomerase
           chr07_pseudomolecule_IMGAG_V3 33954296-33953176 E
           EGN_Mt090430 20090702
          Length = 280

 Score =  299 bits (765), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 157/257 (61%), Positives = 194/257 (75%), Gaps = 8/257 (3%)

Query: 14  LSMEAGPLSPMAPISQPPVILTQDELKKIAAYKAVDFVQSGMVLGLGTGSTAKHAVDRIA 73
           L +   PLS     S   + LTQD+LKK+AA KAV++V+SGMVLGLGTGSTA   V ++ 
Sbjct: 31  LKLRTKPLS----FSVKAITLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVSKLG 86

Query: 74  DLLHQGKLKNIIGIPTSKKTHQQALSLGIPLSDLDSHPNVDLAIDGADEVDSDLNLVKGR 133
           +LL+ G+L NIIG+PTSK+T +QA SLGIPLS LD +P +DLAIDGADEVD  LNLVKGR
Sbjct: 87  ELLNSGELTNIIGVPTSKRTEEQARSLGIPLSVLDDNPRLDLAIDGADEVDPFLNLVKGR 146

Query: 134 GGSLLREKMIESACKKFVVIVDESKLVPHIGANG-AMPVEVVPFCWKFTQERLQEMFGYA 192
           GG+LLREKM+E+A  KFVV+VD++KLV  +G +G AMPVEVV FCWK+   RLQE+F   
Sbjct: 147 GGALLREKMVEAASDKFVVVVDDTKLVSGLGGSGLAMPVEVVQFCWKYNLIRLQELFKEE 206

Query: 193 DCLAKLRRNGDSESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGM 252
              AKLR +   ESG+P+VTDN NYIVDL+FK  I D  AA   I  L GVVEHG+FL M
Sbjct: 207 GVDAKLRVD---ESGKPYVTDNSNYIVDLYFKTPIRDANAAGAEISSLEGVVEHGLFLNM 263

Query: 253 ATTVIVAGEFGVTMKNK 269
           AT+VI+AG+ GV +K+K
Sbjct: 264 ATSVIIAGKTGVEVKDK 280


>IMGA|Medtr1g074140.1 Ribose 5-phosphate isomerase;
           Homeodomain-like; chr01_pseudomolecule_IMGAG_V3
           14953614-14956280 E EGN_Mt090430 20090702
          Length = 399

 Score =  114 bits (285), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/75 (74%), Positives = 65/75 (86%), Gaps = 2/75 (2%)

Query: 195 LAKLRRNGDSESGEPFVTDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGMAT 254
           + KLR +G  E GEP+VTDNGNYIVDL+FKK IGDL+ ASDAIL +AGVVEHGMFL MAT
Sbjct: 327 ILKLRTSG--EKGEPYVTDNGNYIVDLYFKKSIGDLRVASDAILNIAGVVEHGMFLDMAT 384

Query: 255 TVIVAGEFGVTMKNK 269
           TVIVAGE G+T+K+K
Sbjct: 385 TVIVAGELGLTVKSK 399


>IMGA|Medtr2g036830.1 Ribose 5-phosphate isomerase
           chr02_pseudomolecule_IMGAG_V3 9882668-9886939 E
           EGN_Mt090430 20090702
          Length = 250

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 15/238 (6%)

Query: 39  LKKIAAYKAVDFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQAL 98
           L + A Y    +V+SGMV+GLG+G  +  A+  +   L  G LK+++GIPTS  +  +A 
Sbjct: 14  LLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAA 73

Query: 99  SLGIPLSDLDSHPNVDLAIDGADEVDSDLNL-VKGRGGSLLREKMIESACKKFVVIVDES 157
             GIPL        +D+A D AD V+    + + GR      E +I+   +K + I++E+
Sbjct: 74  KAGIPLDTYQDSSQIDIAFDDADGVEEGTFVAIIGRRKLQSEESIIQ---EKAMFIIEEN 130

Query: 158 KLVPHIGANGAMPVEVVPFCWKFTQERLQEMF-GYADCLAKLRRNGDSESGE-----PFV 211
           +     G  G++PV +    W    E + +MF G A+     RR    ++G      P V
Sbjct: 131 QY--KGGLEGSIPVLIQSLNWLAAAEEIDDMFLGDAEV---WRRPAIGQAGPLGGDFPLV 185

Query: 212 TDNGNYIVDLFFKKDIGDLKAASDAILRLAGVVEHGMFLGMATTVIVAGEFGVTMKNK 269
           T  G+ ++D+ F   I  L   +  +  + GVV+HG+      TV++A   G+ + +K
Sbjct: 186 TGEGHNVLDVIFTSPIPSLAEVAKILDNVDGVVDHGVISKTPCTVVIASPNGLNVLDK 243


>IMGA|Medtr2g036830.2 Ribose 5-phosphate isomerase
           chr02_pseudomolecule_IMGAG_V3 9882668-9885129 E
           EGN_Mt090430 20090702
          Length = 127

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 49/86 (56%)

Query: 39  LKKIAAYKAVDFVQSGMVLGLGTGSTAKHAVDRIADLLHQGKLKNIIGIPTSKKTHQQAL 98
           L + A Y    +V+SGMV+GLG+G  +  A+  +   L  G LK+++GIPTS  +  +A 
Sbjct: 14  LLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAA 73

Query: 99  SLGIPLSDLDSHPNVDLAIDGADEVD 124
             GIPL        +D+A D AD V+
Sbjct: 74  KAGIPLDTYQDSSQIDIAFDDADGVE 99