Jatropha Genome Database

JcCB0113371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0113371.10 + phase: 2 /partial
         (182 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g044000.1 Protein of unknown function DUF667 chr08_ps...   323   3e-89
IMGA|Medtr8g044000.2 Protein of unknown function DUF667 chr08_ps...   322   6e-89
IMGA|Medtr8g044000.3 Protein of unknown function DUF667 chr08_ps...   159   5e-40

>IMGA|Medtr8g044000.1 Protein of unknown function DUF667
           chr08_pseudomolecule_IMGAG_V3 9671478-9675874 E
           EGN_Mt090430 20090702
          Length = 255

 Score =  323 bits (828), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 150/161 (93%), Positives = 157/161 (97%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KRP DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLVMIVKNLKKYFT
Sbjct: 58  VVDGHIKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVMIVKNLKKYFT 117

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKPYICTMPL+MDEGWNQIQ NLADFT++AYGTNY
Sbjct: 118 FEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLADFTKKAYGTNY 177

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQV 174
           VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQV
Sbjct: 178 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQV 218


>IMGA|Medtr8g044000.2 Protein of unknown function DUF667
           chr08_pseudomolecule_IMGAG_V3 9671478-9675874 E
           EGN_Mt090430 20090702
          Length = 218

 Score =  322 bits (825), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 149/160 (93%), Positives = 156/160 (97%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KRP DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLVMIVKNLKKYFT
Sbjct: 58  VVDGHIKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVMIVKNLKKYFT 117

Query: 74  FEIQVLDDKNVRRRFRASNFQAITRVKPYICTMPLKMDEGWNQIQLNLADFTRRAYGTNY 133
           FEIQVLDDKNVRRRFRASNFQA+TRVKPYICTMPL+MDEGWNQIQ NLADFT++AYGTNY
Sbjct: 118 FEIQVLDDKNVRRRFRASNFQAVTRVKPYICTMPLRMDEGWNQIQFNLADFTKKAYGTNY 177

Query: 134 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 173
           VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ
Sbjct: 178 VETLRVQVHANCRLRRIYFSDRLYSEEELPPEFKLYLPMQ 217


>IMGA|Medtr8g044000.3 Protein of unknown function DUF667
           chr08_pseudomolecule_IMGAG_V3 9671478-9675874 E
           EGN_Mt090430 20090702
          Length = 142

 Score =  159 bits (403), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/82 (91%), Positives = 78/82 (95%)

Query: 14  VSNGHVKRPHDEDIQSNVLEIVGSNIQSTYITCPVDPAATLGIKLPFLVMIVKNLKKYFT 73
           V +GH+KRP DEDIQSNVLEI+GSNIQSTYITCP DPAATLGIKLPFLVMIVKNLKKYFT
Sbjct: 58  VVDGHIKRPQDEDIQSNVLEIIGSNIQSTYITCPADPAATLGIKLPFLVMIVKNLKKYFT 117

Query: 74  FEIQVLDDKNVRRRFRASNFQA 95
           FEIQVLDDKNVRRRFRASNFQ 
Sbjct: 118 FEIQVLDDKNVRRRFRASNFQV 139