Jatropha Genome Database

JcCB0112461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0112461.10 - phase: 0 /partial
         (201 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g133500.1 Putative methyltransferase KIAA0859 homolog...    83   7e-17
IMGA|Medtr4g133410.1 Putative methyltransferase KIAA0859 homolog...    83   7e-17
IMGA|Medtr4g089760.1 Putative methyltransferase KIAA0859 homolog...    76   1e-14
IMGA|Medtr7g094110.1 Methyltransferase type 12 chr07_pseudomolec...    59   1e-09

>IMGA|Medtr4g133500.1 Putative methyltransferase KIAA0859 homolog,
           chr04_pseudomolecule_IMGAG_V3 32005747-31997914 E
           EGN_Mt090430 20090702
          Length = 768

 Score = 83.2 bits (204), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 15/177 (8%)

Query: 22  WNDRFS-KEEHFEWFKDYSHFRHLIQAHITT-----NASMKVLELGCGNSQLCEEIYKDG 75
           W++ F+ + + FEW+ ++ H R  + + + T      AS+ VL  GCGNS+L E +Y  G
Sbjct: 25  WDNFFTIRPDSFEWYAEWPHLRDPLISLLQTLTPPPPASLPVLVPGCGNSRLSEHLYDAG 84

Query: 76  ITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDLPFSDKCFDVVIEKGTMDVLFV 135
            T IT ID S V +  M +R +++    ++    DM  + F D+ F  V++KG +D L  
Sbjct: 85  FTSITNIDFSKVVIGDMLRR-NIRSRPLMRWRVMDMTAMQFEDEFFGAVVDKGGLDALM- 142

Query: 136 NSGDPWNPRPTTVAQVKAMLDGVHRVLKPDGIFISISFGQPHFRRPLFNAPEFTWSV 192
              +P    PT   Q    L  V RVLKP G F+ ++  + H    LF+     W +
Sbjct: 143 ---EP-ELGPTLGNQ---YLSEVKRVLKPGGKFVCLTLAESHVLDILFSKFRLGWKM 192


>IMGA|Medtr4g133410.1 Putative methyltransferase KIAA0859 homolog,
           chr04_pseudomolecule_IMGAG_V3 31953014-31960847 E
           EGN_Mt090430 20090702
          Length = 768

 Score = 83.2 bits (204), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 15/177 (8%)

Query: 22  WNDRFS-KEEHFEWFKDYSHFRHLIQAHITT-----NASMKVLELGCGNSQLCEEIYKDG 75
           W++ F+ + + FEW+ ++ H R  + + + T      AS+ VL  GCGNS+L E +Y  G
Sbjct: 25  WDNFFTIRPDSFEWYAEWPHLRDPLISLLQTLTPPPPASLPVLVPGCGNSRLSEHLYDAG 84

Query: 76  ITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDLPFSDKCFDVVIEKGTMDVLFV 135
            T IT ID S V +  M +R +++    ++    DM  + F D+ F  V++KG +D L  
Sbjct: 85  FTSITNIDFSKVVIGDMLRR-NIRSRPLMRWRVMDMTAMQFEDEFFGAVVDKGGLDALM- 142

Query: 136 NSGDPWNPRPTTVAQVKAMLDGVHRVLKPDGIFISISFGQPHFRRPLFNAPEFTWSV 192
              +P    PT   Q    L  V RVLKP G F+ ++  + H    LF+     W +
Sbjct: 143 ---EP-ELGPTLGNQ---YLSEVKRVLKPGGKFVCLTLAESHVLDILFSKFRLGWKM 192


>IMGA|Medtr4g089760.1 Putative methyltransferase KIAA0859 homolog,
           chr04_pseudomolecule_IMGAG_V3 18776451-18780816 E
           EGN_Mt090430 20090702
          Length = 233

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 97/181 (53%), Gaps = 17/181 (9%)

Query: 15  AYLDPNYWNDRFSKEEH-FEWFKDYSHFRHLIQAHITTNASMKVLELGCGNSQLCEEIYK 73
           AY +  YW++R++ E   F+W++ Y     +I  ++  N S  +L +G   SQ    + +
Sbjct: 7   AYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPKNQS--ILVVGSAFSQ--GMVDE 62

Query: 74  DGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADMLDL-PFSDKCFDVVIEKGTMDV 132
            G  D+  ID+S+V ++ M+++   +   ++K L+ D+ D+  F+ + F  VI+KGT+D 
Sbjct: 63  GGYKDVVNIDISSVVIDAMQKKY--RDRPQLKYLKMDVRDMSAFASETFGSVIDKGTLDS 120

Query: 133 LFVNSGDPWNPRPTTVAQVKAMLDGVHRVLKPDGIFISISFGQPHFRRPLFNAPEFTWSV 192
           +   +    N R         ML+ + RVLK  G++I +++G P +R  L      +W++
Sbjct: 121 ILCGN----NSR----QHATKMLEEIWRVLKAKGVYILVTYGAPLYRLRLLR-DSCSWTI 171

Query: 193 E 193
           +
Sbjct: 172 K 172


>IMGA|Medtr7g094110.1 Methyltransferase type 12
           chr07_pseudomolecule_IMGAG_V3 21245669-21251108 F
           EGN_Mt090430 20090702
          Length = 340

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 13/122 (10%)

Query: 53  ASMKVLELGCGNSQLCEEIYKDGITDITCIDLSAVAVEKMRQRLSVKGYKEIKVLEADML 112
           +S  VL++G GN  L +E+ K G +D+T  D S  A+   +   +  G+  IK L  D+L
Sbjct: 160 SSWNVLDIGTGNGLLLQELAKQGFSDLTGTDYSERAINLAQSLANRDGFPNIKFLVDDVL 219

Query: 113 DLPFSDKCFDVVIEKGTMDVLFVNSGDPWNPRPTTVAQVKAML--DGVHRVLKPDGIFIS 170
           +    ++ F +V++KGT+D + ++   P          VK M+  D V R++ P GI + 
Sbjct: 220 ETKL-EQVFQLVMDKGTLDAIGLHPDGP----------VKRMMYWDSVSRLVAPGGILVV 268

Query: 171 IS 172
            S
Sbjct: 269 TS 270