Jatropha Genome Database

JcCB0111071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0111071.10 + phase: 0 /partial
         (306 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g038690.1 FAD-dependent pyridine nucleotide-disulphid...   114   6e-26
IMGA|Medtr8g137840.1 FAD-dependent pyridine nucleotide-disulphid...   111   4e-25

>IMGA|Medtr2g038690.1 FAD-dependent pyridine nucleotide-disulphide
           oxidoreductase chr02_pseudomolecule_IMGAG_V3
           10855937-10861933 E EGN_Mt090430 20090702
          Length = 568

 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 153/317 (48%), Gaps = 25/317 (7%)

Query: 8   KELGCDSDARNFGWEINENVNFNWKKLLHKKTDEIMRLNGIYKRLLSNAGVKLFEGGGKV 67
           ++L  D   ++ G +++ N  ++ + +     +   ++ G     +   GV +  G G +
Sbjct: 141 RDLRNDHHLKSLGIQVS-NAGYDRQAVADHANNLASKIRGNLTNSMKALGVDILTGFGTI 199

Query: 68  VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRPN---IPGQELAITSDEALSLEEMPKR 124
           +GP +V++   +      +AK I+IATGS    P    + G+ + ITSD AL LE +P  
Sbjct: 200 LGPQKVKIGSSNNV---VTAKDIIIATGSVPFVPKGIEVDGKTV-ITSDHALKLETVPDW 255

Query: 125 AVVLGGGYIAVEFASIWRGMGATVDLVFRKELPLRGFDDEMRAVVARNL-EGRGINLHPR 183
             ++G GYI +EF+ ++  +G+ V  V   +  + GFD E+  +  R L   R I+ H  
Sbjct: 256 IAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTG 315

Query: 184 TTLTQLTKTENG---IIALTD-----HGEELLADVVLFATGRAPNSKRLNLEAVGVELDS 235
              +++T   +G   +I L D       E L  D  L ATGRAP ++ L LE + V    
Sbjct: 316 VFASKITPARDGKPVMIELIDAKTKEQKETLEVDAALIATGRAPFTQGLGLENIDVATQR 375

Query: 236 AGAIKVDE------YSCTNVPSIYAIGDVTNRMNLTPVALMEGTCFAKTVFGGQPSKPDY 289
            G + VDE       +   VP +Y IGD   +M L   A  +G    + V  G+    ++
Sbjct: 376 -GFVPVDERMRVIDANGNLVPHLYCIGDANGKMMLAHAASAQGISVVEQV-TGRDHVLNH 433

Query: 290 KDIPCAVFSIPPLSVVG 306
             IP A F+ P +S+VG
Sbjct: 434 LSIPAACFTHPEISMVG 450


>IMGA|Medtr8g137840.1 FAD-dependent pyridine nucleotide-disulphide
           oxidoreductase chr08_pseudomolecule_IMGAG_V3
           33095818-33103303 E EGN_Mt090430 20090702
          Length = 565

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 152/319 (47%), Gaps = 29/319 (9%)

Query: 8   KELGCDSDARNFGWEINENVNFNWKKLLHKKTDEIMRLNGIYKRLLSNAGVKLFEGGGKV 67
           +EL  D   ++ G  ++ +  ++ + +     +   ++       L   GV +  G G +
Sbjct: 138 RELKSDHHLKSLGLHVSSS-GYDRQGVADHANNLASKIRSNLTNSLKAIGVDILTGFGTI 196

Query: 68  VGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRPNIP-GQEL----AITSDEALSLEEMP 122
           +GP +V++   +      +AK I+IATGS    P +P G E+     ITSD AL LE +P
Sbjct: 197 LGPQKVKIGSSNNV---VTAKDIIIATGSV---PFVPKGVEVDGKTVITSDHALKLESVP 250

Query: 123 KRAVVLGGGYIAVEFASIWRGMGATVDLVFRKELPLRGFDDEMRAVVARNL-EGRGINLH 181
               ++G GYI +EF+ ++  +G+ V  V   +  + GFD E+  +  R L   R I+ H
Sbjct: 251 DWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLVNPRNIDYH 310

Query: 182 PRTTLTQLTKTENG---IIALTDH-----GEELLADVVLFATGRAPNSKRLNLEAVGVEL 233
                +++T   +G   +I L D       + L  D  L ATGRAP ++ L LE V V  
Sbjct: 311 TGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENVDVAT 370

Query: 234 DSAGAIKVDE------YSCTNVPSIYAIGDVTNRMNLTPVALMEGTCFAKTVFGGQPSKP 287
              G + VDE       +   VP +Y IGD   +M L   A  +G    + V  G+    
Sbjct: 371 QR-GFVPVDERMRVIDANGKLVPHLYCIGDANGKMMLAHAASAQGISVVEQV-TGRDHVL 428

Query: 288 DYKDIPCAVFSIPPLSVVG 306
           ++  IP A F+ P +S+VG
Sbjct: 429 NHLSIPAACFTHPEISMVG 447