Jatropha Genome Database

JcCB0108161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0108161.10 - phase: 1 /pseudo/partial
         (91 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g116990.1 Cytochrome P450 chr07_pseudomolecule_IMGAG_...    99   8e-22
IMGA|Medtr8g119420.1 Cytochrome P450 chr08_pseudomolecule_IMGAG_...    55   1e-08
IMGA|Medtr1g127050.1 Cytochrome P450 chr01_pseudomolecule_IMGAG_...    49   8e-07
IMGA|Medtr5g102790.1 Cytochrome P450 chr05_pseudomolecule_IMGAG_...    47   2e-06
IMGA|Medtr6g076780.1 Cytochrome P450 chr06_pseudomolecule_IMGAG_...    45   8e-06

>IMGA|Medtr7g116990.1 Cytochrome P450
          chr07_pseudomolecule_IMGAG_V3 27207296-27204189 E
          EGN_Mt090430 20090702
          Length = 507

 Score = 98.6 bits (244), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 1/78 (1%)

Query: 8  KLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSD-DHSILNRVV 66
          K ++SI +VP+K Q+HFR QGI GP YRPI GNSSE+K    E KS+ +  DH IL RVV
Sbjct: 21 KTLHSIFYVPYKIQQHFRNQGISGPTYRPIFGNSSEIKRLYAETKSESNPFDHDILKRVV 80

Query: 67 PAYSTWSRMYGKNYLYWF 84
          P Y+ WS MYGK +LYWF
Sbjct: 81 PFYNRWSCMYGKTFLYWF 98


>IMGA|Medtr8g119420.1 Cytochrome P450 chr08_pseudomolecule_IMGAG_V3
           27065604-27066921 E EGN_Mt090430 20090702
          Length = 123

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 1   ILFLYLLKLVYSILWVPHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDD-- 58
           I  L +LK+   + W P K + +F KQGI+GP Y   IGN  E+     +A S+   +  
Sbjct: 17  IFLLCVLKVTVLLWWRPRKIEGYFAKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPNFS 76

Query: 59  HSILNRVVPAYSTWSRMYGKNYLYWFW 85
           H+IL RV+  Y  W ++YG  +   F+
Sbjct: 77  HNILPRVLSFYHHWKKIYGCFFFATFF 103


>IMGA|Medtr1g127050.1 Cytochrome P450
          chr01_pseudomolecule_IMGAG_V3 28499015-28496170 H
          EGN_Mt090430 20090702
          Length = 500

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)

Query: 15 WV-PHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSKVSDDHSILNRVVPAYSTWS 73
          WV P    +  +  G+ GP  R  +GN  EMK+K   A S +S  H I   V+P +S+W 
Sbjct: 18 WVFPILKHKKLKSCGLGGPTPRFPLGNIEEMKIKDNVAYSHLS--HDIHANVLPYFSSWQ 75

Query: 74 RMYGKNYLYWFWKQ 87
          +++GK ++YW   +
Sbjct: 76 KLHGKVFIYWLGTE 89


>IMGA|Medtr5g102790.1 Cytochrome P450
          chr05_pseudomolecule_IMGAG_V3 41172716-41167303 E
          EGN_Mt090430 20090702
          Length = 516

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 6/75 (8%)

Query: 14 LWV-PHKTQRHFRKQGIQGPDYRPIIGNSSEMKLKREEAKSK---VSDDHSILNRVVPAY 69
          LW+ P K ++  R+QG+QG  YR + G+  ++    +EA+SK   ++DD  I+ RV+P  
Sbjct: 26 LWLRPKKLEKLLREQGLQGNPYRILYGDIKDLLKMEKEARSKSMNLTDD--IMPRVIPYI 83

Query: 70 STWSRMYGKNYLYWF 84
              +++GKN   WF
Sbjct: 84 QHNVKIHGKNSFMWF 98


>IMGA|Medtr6g076780.1 Cytochrome P450
          chr06_pseudomolecule_IMGAG_V3 14920756-14918247 H
          EGN_Mt090430 20090702
          Length = 501

 Score = 45.1 bits (105), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 31 GPDYRPIIGNSSEMKLKREEAKSKVSDDHSILNRVVPAYSTWSRMYGKNYLYWF 84
          GP  R  +GN  EMK+K   A S +S  H I   V+P +S+W +++GK ++YW 
Sbjct: 36 GPTPRFPLGNIDEMKIKDNVAYSYLS--HDIHANVLPYFSSWQKLHGKVFIYWL 87