Jatropha Genome Database
- JcCB0107751.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0107751.10 - phase: 0 /pseudo/partial
(484 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g093100.1 Zinc finger, CCHC-type chr01_pseudomolecule... 103 2e-22
IMGA|Medtr1g126820.1 hypothetical protein chr01_pseudomolecule_I... 97 1e-20
IMGA|Medtr4g159470.1 hypothetical protein chr04_pseudomolecule_I... 91 1e-18
IMGA|Medtr5g023930.1 Zinc finger, CCHC-type chr05_pseudomolecule... 88 9e-18
IMGA|Medtr8g043470.1 hypothetical protein chr08_pseudomolecule_I... 87 2e-17
IMGA|Medtr5g085770.1 Zinc finger, CCHC-type chr05_pseudomolecule... 86 3e-17
IMGA|Medtr6g043820.1 hypothetical protein chr06_pseudomolecule_I... 86 4e-17
IMGA|Medtr1g117580.1 hypothetical protein chr01_pseudomolecule_I... 77 1e-14
IMGA|Medtr8g024170.1 hypothetical protein chr08_pseudomolecule_I... 68 8e-12
IMGA|Medtr8g133750.1 Zinc finger, CCHC-type, related chr08_pseud... 53 3e-07
IMGA|Medtr1g087330.1 hypothetical protein chr01_pseudomolecule_I... 50 2e-06
>IMGA|Medtr1g093100.1 Zinc finger, CCHC-type
chr01_pseudomolecule_IMGAG_V3 18824066-18830760 E
EGN_Mt090430 20090702
Length = 779
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 83/147 (56%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
DY LVGR LT + + F K +++LW+P H V+I + N F+FQF + AD RV +
Sbjct: 320 DYCLVGRLLTTKPVRFQNFKTRMSTLWQPKHQVDITLMEPNRFMFQFFNYADMERVTQQG 379
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSA 153
PW FD + L++ + P + +W+QVH++P GF++ M +GN+V + V
Sbjct: 380 PWLFDSYPLIWSKVSDGKDPFTMPIDSIELWMQVHNLPFGFMTETMGILLGNHVGKLVKY 439
Query: 154 NETNFSSMWQGFIWIRILIDTRIPLKR 180
+ N W+ ++ +R+ + + PLK+
Sbjct: 440 DHDNNYGNWRRYMRLRVSLPAKEPLKK 466
>IMGA|Medtr1g126820.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 28356085-28354664 H
EGN_Mt090430 20090702
Length = 473
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
D LVGR+L+++ I F A + LA LW+P ++ N FLFQF D D RV+
Sbjct: 27 DCCLVGRWLSNKPIRFHATRNRLAHLWQPDKKMDATLTENNRFLFQFFDQGDMERVLHTG 86
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSA 153
PW FD + +L L P + IW+Q H++P GF++ M +GN+V + +
Sbjct: 87 PWHFDNYPMLLRKLEFGENPLTMPIDMMDIWIQAHNLPFGFMTESMGHLLGNHVGKLLKY 146
Query: 154 NETNFSSMWQGFIWIRILIDTRIPLKRRMHIKK 186
+ N W+ ++ +R+ ++ PLK+ + ++
Sbjct: 147 DFNNNYGTWRKYMRLRVTMNVNGPLKQCLEFER 179
>IMGA|Medtr4g159470.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 40244777-40245604 H
EGN_Mt090430 20090702
Length = 213
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 20/146 (13%)
Query: 33 PDYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEM 92
P LVGRFL +R I MK + +W+P+ GV ++E LFLFQF D ++
Sbjct: 31 PHLCLVGRFLVNRPIRLKEMKIRMYEVWRPVKGVAVKEAQPRLFLFQFFHKLDMEEILNG 90
Query: 93 SPWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVS 152
PW++D H L+ E +V+++P G + K+ +GNY+ EF++
Sbjct: 91 GPWTYDSHSLVLE--------------------KVYNLPTGMMKEKVGTGLGNYIGEFLT 130
Query: 153 ANETNFSSMWQGFIWIRILIDTRIPL 178
+ N SS W ++ ++ + T + L
Sbjct: 131 YDGNNNSSFWHEYMRLKDITRTSVRL 156
>IMGA|Medtr5g023930.1 Zinc finger, CCHC-type
chr05_pseudomolecule_IMGAG_V3 9477733-9471443 E
EGN_Mt090430 20090702
Length = 652
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
D LVGR L + ++F + + +A +WKP V I I N F+FQF D RV+
Sbjct: 198 DCCLVGRLLMSKPVHFNSFRDRMAEIWKPERKVEISRIDNNRFMFQFFHHKDMERVIRTG 257
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHT-HIWLQVHDIPNGFISTKMAQSIGNYVEEFVS 152
PW FD L+ + + P P T +W+Q H++P GF++ M +G+ V V
Sbjct: 258 PWLFDNFPLVLQKVSFGDDP-TTSPLDTIEMWVQAHNLPFGFMTESMGILLGSQVGGLVK 316
Query: 153 ANETNFSSMWQGFIWIRILIDTRIPL 178
+ N W+ F+ +R+ + PL
Sbjct: 317 YDAENNFGSWRRFMRLRVALKVGEPL 342
>IMGA|Medtr8g043470.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 9395963-9394362 E
EGN_Mt090430 20090702
Length = 533
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 83/156 (53%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
D L+GR + ++ ++ ++ L ++W P+ + + + N F+ Q AD N V+E S
Sbjct: 24 DLCLIGRVVVNKPVHLSTIEGRLGNMWCPVMKMKLLPMDDNKFMVQMFSKADLNVVLEGS 83
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSA 153
PW D +++ + + + P + T IW+QVH +P GF+ + + G+++ + V
Sbjct: 84 PWLLDNRMIIVKKVAMGEDPLTLPMNSTEIWVQVHQLPFGFMDKTIGELAGSHIGKLVKY 143
Query: 154 NETNFSSMWQGFIWIRILIDTRIPLKRRMHIKKLRG 189
+E N W+ ++ +R+ I PL++ + I++ G
Sbjct: 144 DEDNNYGPWRKYMRLRVEIALEEPLQQDLVIERSAG 179
>IMGA|Medtr5g085770.1 Zinc finger, CCHC-type
chr05_pseudomolecule_IMGAG_V3 32808134-32806618 E
EGN_Mt090430 20090702
Length = 491
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
DY LVGR LT + + F K +++LW+P H QF + AD RV +
Sbjct: 141 DYCLVGRLLTTKPVRFQNFKTCMSTLWQPKH--------------QFFNYADMERVTQQG 186
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSA 153
PW FD + L++ + P + +W+QVH++P GF++ M +GN+V + V
Sbjct: 187 PWLFDSYPLIWSKVSDGKDPFTMPIDSIELWMQVHNLPFGFMTETMGILLGNHVGKLVKY 246
Query: 154 NETNFSSMWQGFIWIRILIDTRIPLKR 180
+ N W+ ++ +R+ + + PLK+
Sbjct: 247 DHDNNYGNWRRYMRLRVSLSAKEPLKK 273
>IMGA|Medtr6g043820.1 hypothetical protein
chr06_pseudomolecule_IMGAG_V3 9231244-9232746 H
EGN_Mt090430 20090702
Length = 500
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 84/156 (53%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
D L+G+ + ++ ++ ++ L +W+P H +++ ++ N F+ Q + +R++E S
Sbjct: 26 DLCLIGKVVVNKPVHISTIEGRLGPIWRPTHQMDLIQMDDNKFMVQLFHRGELDRILEGS 85
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSA 153
P D ++++ + + + P ++ T IW+Q+H +P GF+ + +G++V V
Sbjct: 86 PSLVDSNMVILKKVNVGEDPASIPMTKTEIWVQIHQLPFGFMEKSVRALVGSHVGRMVKY 145
Query: 154 NETNFSSMWQGFIWIRILIDTRIPLKRRMHIKKLRG 189
+E N W+ F+ R ID PL++ + I+K G
Sbjct: 146 DEENNYGPWRKFMRGRAEIDMEEPLQQELVIEKEGG 181
>IMGA|Medtr1g117580.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 25273871-25275952 H
EGN_Mt090430 20090702
Length = 663
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
Query: 34 DYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMS 93
+ LVG LTD + F M+ L S+W+P GV I + +N F FQF D RV++
Sbjct: 182 ELCLVGTVLTDTPVRFQFMEERLPSIWRPGQGVTITQAGENRFHFQFYHEWDVERVLQNG 241
Query: 94 PWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSA 153
PW+FD LL+ + L ++ IG ++ +FV
Sbjct: 242 PWTFDGFLLVLKKL------------------------------EIGMLIGCHIGKFVKY 271
Query: 154 NETNFSSMWQGFIWIRILIDTRIPLKRRMHIKKLRGT 190
+E+N+ W+ ++ IR+ ++T PL+R M +K GT
Sbjct: 272 DESNYYGPWRMYMRIRVALNTAEPLRRSMVFEKEDGT 308
>IMGA|Medtr8g024170.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4512491-4512114 H
EGN_Mt090430 20090702
Length = 125
Score = 68.2 bits (165), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 33 PDYTLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEM 92
P LVGRFL +R M ++ +W+P+ V ++E LFLFQF D V++
Sbjct: 31 PRLCLVGRFLVNRPARLKEMMIRMSEVWRPVKEVVVKEAQPGLFLFQFFHKLDLEEVLKG 90
Query: 93 SPWSFDQHLLLFETLGLDXQPQNVQPFHTHIWLQV 127
PW++D H L+ E L + +++Q + ++W++V
Sbjct: 91 GPWTYDNHSLVLEKLRIGVPLKDIQLNYMNLWVRV 125
>IMGA|Medtr8g133750.1 Zinc finger, CCHC-type, related
chr08_pseudomolecule_IMGAG_V3 31989698-31990763 H
EGN_Mt090430 20090702
Length = 320
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 56 LASLWKPI-HGVNIREISKNLFLFQFLDVADTNRVVEMSPWSFDQHLLLFETLGLDXQPQ 114
++ +W+ + V ++E LFLFQF D V++ PW++D H L+ E L
Sbjct: 5 MSEVWRSVGERVAVKEAQPGLFLFQFFHKLDMEEVLKGGPWTYDNHSLVLEKL------- 57
Query: 115 NVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANETNFSSMWQGFIWIRILIDT 174
+ W + NG A+ + Y F+ + N SS W+ ++ +++ D
Sbjct: 58 RIGGLQFVNWYDEGESRNG------ARKL--YWRVFLEYDGNNNSSFWREYMRLKVRFDI 109
Query: 175 RIPLKRRMHIKKLRGTY 191
R PLK IK G +
Sbjct: 110 RQPLKIGKKIKANEGEW 126
>IMGA|Medtr1g087330.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 17573397-17575725 E
EGN_Mt090430 20090702
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 36 TLVGRFLTDRNINFLAMKXTLASLWKPIHGVNIREISKNLFLFQFLDVADTNRVVEMSPW 95
+++G+ ++++ I+ +++ L+++W G + I LF F + DT R++ +PW
Sbjct: 85 SILGKIVSEKAIHRNSIQNALSNIWCNPKGFRVEHIGDKLFHFFMDEQEDTKRIIRGNPW 144
Query: 96 SFDQHLLLFETLGLDXQPQNVQPFHTHIWLQVHDIPNGFISTKMAQSIGNYVEEFVSANE 155
F L+ D ++++ H IW+Q+ +P + +M IG+ + +++
Sbjct: 145 FFRNSWLIVHPWRRDIDARSLEFRHAPIWVQLRGLPTQCRTKQMGIKIGSSIGTVLASEL 204
Query: 156 TNFSSMWQGFIWIRILIDTRIPLKRRMHI 184
+ + I I++ + P+K ++I
Sbjct: 205 YEYPDK-KLIIKIKVNLAVSTPIKAGIYI 232