Jatropha Genome Database

JcCB0104661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0104661.10 + phase: 0 
         (146 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233662_56.1 Actin-binding, cofilin/tropomyosin type AC233...   184   1e-47
IMGA|Medtr5g010560.1 Actin-binding, cofilin/tropomyosin type chr...   177   2e-45
IMGA|Medtr4g149600.1 Actin-binding, cofilin/tropomyosin type chr...   172   4e-44
IMGA|Medtr2g034250.1 Actin-binding, cofilin/tropomyosin type chr...   172   8e-44
IMGA|Medtr1g127180.1 Actin-binding, cofilin/tropomyosin type chr...   169   6e-43
IMGA|Medtr4g136720.1 Actin-binding, cofilin/tropomyosin type chr...   166   3e-42
IMGA|Medtr4g149850.1 Actin-binding, cofilin/tropomyosin type chr...   159   3e-40

>IMGA|AC233662_56.1 Actin-binding, cofilin/tropomyosin type
           AC233662.1 257418-259371 F EGN_Mt090430 20090702
          Length = 139

 Score =  184 bits (467), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 102/137 (74%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     FLEL+ K+ +RY++++I+           G PA  Y+DF A+LP 
Sbjct: 3   NAASGMAVNDECKLKFLELKAKRTYRYIIYKIEEKQKQVVVDKVGDPANGYDDFTANLPA 62

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFDFVT ENCQKS+IFFIAW P  SR+R+KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 63  DECRYAVYDFDFVTEENCQKSRIFFIAWCPDISRVRSKMIYASSKDRFKRELDGIQVELQ 122

Query: 130 ATDPTEMDLEVIRERAN 146
           ATDPTEMDL+V + R N
Sbjct: 123 ATDPTEMDLDVFKSRVN 139


>IMGA|Medtr5g010560.1 Actin-binding, cofilin/tropomyosin type
           chr05_pseudomolecule_IMGAG_V3 2666975-2668771 E
           EGN_Mt090430 20090702
          Length = 137

 Score =  177 bits (449), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 2/136 (1%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     F EL+ K+ +R++VF+I+           GGP E+Y+DF ASLP 
Sbjct: 3   NAASGMAVDDECKLKFQELKAKRSYRFIVFKIEQQQVVIDK--IGGPTETYDDFQASLPA 60

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFDF T+ENCQKSKI+FIAWSP  SR+R KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 61  DECRYAVYDFDFTTAENCQKSKIYFIAWSPEVSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 130 ATDPTEMDLEVIRERA 145
           ATDP+EM L++++ RA
Sbjct: 121 ATDPSEMSLDIVKGRA 136


>IMGA|Medtr4g149600.1 Actin-binding, cofilin/tropomyosin type
           chr04_pseudomolecule_IMGAG_V3 37225693-37226741 E
           EGN_Mt090430 20090702
          Length = 137

 Score =  172 bits (437), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 103/136 (75%), Gaps = 2/136 (1%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     F EL+ K+ +R++VF+I+           G P++SY+DF AS P 
Sbjct: 3   NAASGMAVHDDCKLRFQELKSKRSYRFIVFKIEEQQVVVEK--LGEPSDSYDDFMASFPA 60

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFDF T+ENCQKSKI+F+AWSP TSR+R KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 61  DECRYAVYDFDFTTNENCQKSKIYFVAWSPDTSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 130 ATDPTEMDLEVIRERA 145
           ATDP+EM L++++ RA
Sbjct: 121 ATDPSEMSLDIVKARA 136


>IMGA|Medtr2g034250.1 Actin-binding, cofilin/tropomyosin type
           chr02_pseudomolecule_IMGAG_V3 9519232-9521565 F
           EGN_Mt090430 20090702
          Length = 139

 Score =  172 bits (435), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 101/137 (73%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     F+EL+ K+ HR++V++I+           G PA+ YEDF A LP 
Sbjct: 3   NAASGMAVHDDCKLKFMELKAKRTHRFIVYKIEEKQKQVIVEKLGEPAQGYEDFTACLPA 62

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDF+++T EN  KS+IFFI WSP T+R+R+KM+YA++K+RF+RELDGI  E+Q
Sbjct: 63  DECRYAVYDFEYLTEENVPKSRIFFIGWSPDTARVRSKMIYASTKERFKRELDGIQIELQ 122

Query: 130 ATDPTEMDLEVIRERAN 146
           ATDPTEM L+V + RAN
Sbjct: 123 ATDPTEMGLDVFKSRAN 139


>IMGA|Medtr1g127180.1 Actin-binding, cofilin/tropomyosin type
           chr01_pseudomolecule_IMGAG_V3 28558276-28560020 E
           EGN_Mt090430 20090702
          Length = 137

 Score =  169 bits (427), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 2/136 (1%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     FLEL+ K+ +R++VF+I+           GG  E+Y+DF+A LP 
Sbjct: 3   NAASGMAVNDECKLKFLELKAKRNYRFIVFKIENQEVVLEK--LGGKEETYDDFSACLPA 60

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAV+DFDF T+ENC KSKIFFIAWSP  S++R KM+YA++KDRF+RELDGI  E+Q
Sbjct: 61  DECRYAVFDFDFTTAENCMKSKIFFIAWSPDISKVRHKMVYASTKDRFKRELDGIQVELQ 120

Query: 130 ATDPTEMDLEVIRERA 145
           ATDP+EM  ++I+ RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136


>IMGA|Medtr4g136720.1 Actin-binding, cofilin/tropomyosin type
           chr04_pseudomolecule_IMGAG_V3 33475062-33473096 F
           EGN_Mt090430 20090702
          Length = 139

 Score =  166 bits (420), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 101/137 (73%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     F+EL+ K+ HR+++++I+           G P + YE+FAA LP 
Sbjct: 3   NAASGMAVHDDCKLRFMELKAKRTHRFIIYKIEEKQKQVIVEKLGEPVQGYEEFAACLPA 62

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAV+D++F+T  N  KS+IFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 63  DECRYAVFDYEFMTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQ 122

Query: 130 ATDPTEMDLEVIRERAN 146
           ATDPTE+ L+V + RA+
Sbjct: 123 ATDPTEIGLDVFKSRAS 139


>IMGA|Medtr4g149850.1 Actin-binding, cofilin/tropomyosin type
           chr04_pseudomolecule_IMGAG_V3 37309050-37310116 E
           EGN_Mt090430 20090702
          Length = 121

 Score =  159 bits (403), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 97/136 (71%), Gaps = 18/136 (13%)

Query: 10  NATSGMGVADHSINTFLELQRKKVHRYVVFRIDXXXXXXXXXXTGGPAESYEDFAASLPE 69
           NA SGM V D     F EL+ K+ +R++                  P++SY+DF AS P 
Sbjct: 3   NAASGMAVHDDCKLRFQELKSKRSYRFI------------------PSDSYDDFMASFPA 44

Query: 70  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 129
           ++CRYAVYDFDF T+ENCQKSKI+F+AWSP TSR+R KM+YA+SKDRF+RELDGI  E+Q
Sbjct: 45  DECRYAVYDFDFTTNENCQKSKIYFVAWSPDTSRVRMKMVYASSKDRFKRELDGIQVELQ 104

Query: 130 ATDPTEMDLEVIRERA 145
           ATDP+EM L++++ RA
Sbjct: 105 ATDPSEMSLDIVKARA 120