Jatropha Genome Database

JcCB0104191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0104191.10 + phase: 0 /partial
         (176 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g137720.1 TENA/THI-4 protein chr08_pseudomolecule_IMG...   264   1e-71
IMGA|Medtr8g137720.2 TENA/THI-4 protein chr08_pseudomolecule_IMG...   203   4e-53
IMGA|Medtr8g137720.3 TENA/THI-4 protein chr08_pseudomolecule_IMG...   115   1e-26

>IMGA|Medtr8g137720.1 TENA/THI-4 protein
           chr08_pseudomolecule_IMGAG_V3 33048935-33050219 E
           EGN_Mt090430 20090702
          Length = 231

 Score =  264 bits (675), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 145/175 (82%), Gaps = 1/175 (0%)

Query: 1   QDYIFVREFVPFVASVLLKACKNSEDGNDMEVILGGLASLNDEIAWFKSEASKWDVSLSN 60
           QDY+FVR FVPFVASVL+KACK S+D +D+EVILGG+ASL DEI WFK EA+KW +S S+
Sbjct: 56  QDYLFVRAFVPFVASVLIKACKESDDSDDVEVILGGMASLKDEILWFKREANKWGISFSD 115

Query: 61  TVVHKANQTYCRFLESLMSREVEYALALTALWAIEATYQESFAHCLEDGSKTPPELQETC 120
            V  KAN  YCR LESLMS +V+Y + LTA WAIE  YQESFAHC+E+GSKTPPEL+ETC
Sbjct: 116 VVPQKANINYCRLLESLMSPDVDYTVTLTAFWAIEVVYQESFAHCIEEGSKTPPELKETC 175

Query: 121 RRWGNEGFGEYCRSLKKIANRYLEKASADVIAKAEVTLLHVLEHEVEFWNMSHRG 175
            RWGNEGFG+YC+SL+KI N+ L+KAS D + KAEV LL ++EHEV FWNMS RG
Sbjct: 176 ERWGNEGFGQYCQSLQKILNQRLQKASDDELKKAEVMLLSIIEHEVHFWNMS-RG 229


>IMGA|Medtr8g137720.2 TENA/THI-4 protein
           chr08_pseudomolecule_IMGAG_V3 33048935-33050219 E
           EGN_Mt090430 20090702
          Length = 140

 Score =  203 bits (516), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 94/140 (67%), Positives = 112/140 (80%), Gaps = 1/140 (0%)

Query: 37  LASLNDEIAWFKSEASKWDVSLSNTVVHKANQTYCRFLESLMSREVEYALALTALWAIEA 96
           +ASL DEI WFK EA+KW +S S+ V  KAN  YCR LESLMS +V+Y + LTA WAIE 
Sbjct: 1   MASLKDEILWFKREANKWGISFSDVVPQKANINYCRLLESLMSPDVDYTVTLTAFWAIEV 60

Query: 97  TYQESFAHCLEDGSKTPPELQETCRRWGNEGFGEYCRSLKKIANRYLEKASADVIAKAEV 156
            YQESFAHC+E+GSKTPPEL+ETC RWGNEGFG+YC+SL+KI N+ L+KAS D + KAEV
Sbjct: 61  VYQESFAHCIEEGSKTPPELKETCERWGNEGFGQYCQSLQKILNQRLQKASDDELKKAEV 120

Query: 157 TLLHVLEHEVEFWNMSHRGT 176
            LL ++EHEV FWNMS RG 
Sbjct: 121 MLLSIIEHEVHFWNMS-RGN 139


>IMGA|Medtr8g137720.3 TENA/THI-4 protein
           chr08_pseudomolecule_IMGAG_V3 33048838-33050219 E
           EGN_Mt090430 20090702
          Length = 137

 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 62/79 (78%)

Query: 1   QDYIFVREFVPFVASVLLKACKNSEDGNDMEVILGGLASLNDEIAWFKSEASKWDVSLSN 60
           QDY+FVR FVPFVASVL+KACK S+D +D+EVILGG+ASL DEI WFK EA+KW +S S+
Sbjct: 56  QDYLFVRAFVPFVASVLIKACKESDDSDDVEVILGGMASLKDEILWFKREANKWGISFSD 115

Query: 61  TVVHKANQTYCRFLESLMS 79
            V  KAN  YCR+   L S
Sbjct: 116 VVPQKANINYCRYFYKLFS 134