Jatropha Genome Database

JcCB0103641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103641.10 + phase: 0 
         (165 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti...    92   1e-19
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti...    91   2e-19
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti...    80   6e-16
IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcripti...    61   3e-10
IMGA|Medtr7g083430.1 Transcription factor, K-box chr07_pseudomol...    59   1e-09
IMGA|Medtr5g049080.1 Transcription factor, K-box chr05_pseudomol...    56   8e-09
IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcripti...    56   1e-08
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti...    53   7e-08
IMGA|Medtr7g083450.1 Transcription factor, K-box chr07_pseudomol...    52   1e-07
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol...    48   3e-06
IMGA|Medtr2g010020.1 Transcription factor, K-box chr02_pseudomol...    47   3e-06
IMGA|Medtr5g033820.1 Transcription factor, MADS-box; Transcripti...    47   4e-06

>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr08_pseudomolecule_IMGAG_V3
           15487044-15481223 E EGN_Mt090430 20090702
          Length = 240

 Score = 91.7 bits (226), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 56/65 (86%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           +L  +  H+MGEDL S+SLKELQ+LEQQ+D+ALK IR+R+NQ MYESISELQKK+K +QE
Sbjct: 104 LLQRNYRHYMGEDLGSMSLKELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQE 163

Query: 83  QNNQL 87
           QNN L
Sbjct: 164 QNNML 168


>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           20888794-20881921 E EGN_Mt090430 20090702
          Length = 301

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 52/58 (89%)

Query: 30  HFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQL 87
           H+MGE+LDS+SLKELQ LEQQ+D+ LK+IR+RK Q MYE+ISELQKK+K +QEQNN L
Sbjct: 111 HYMGEELDSMSLKELQCLEQQLDTGLKNIRTRKTQVMYEAISELQKKEKGIQEQNNML 168


>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3615380-3622271 E EGN_Mt090430 20090702
          Length = 256

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 53/65 (81%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           VL  +  +F+G DLD LS+KELQ+LEQQ+D++LK IR+RKNQ M +SISEL K+ + LQE
Sbjct: 102 VLERNLRNFVGNDLDPLSVKELQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRARTLQE 161

Query: 83  QNNQL 87
           QNN+L
Sbjct: 162 QNNKL 166


>IMGA|Medtr4g147260.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           36883844-36877638 E EGN_Mt090430 20090702
          Length = 241

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 45/65 (69%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
            L  S+ + MGEDL  LS KEL++LE+Q+DS+LK IRS + Q M + +S+LQ+K+  L E
Sbjct: 105 ALQRSQRNLMGEDLGPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSE 164

Query: 83  QNNQL 87
            N  L
Sbjct: 165 ANRSL 169


>IMGA|Medtr7g083430.1 Transcription factor, K-box
           chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H
           EGN_Mt090430 20090702
          Length = 211

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 43/64 (67%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  S+   +GEDL  L++KELQNLE+Q++ AL   R RK Q M E + EL++K++ L + 
Sbjct: 47  LQKSQRQLLGEDLGPLNMKELQNLEKQLEGALAQARQRKTQIMVEQMEELKRKERHLGDI 106

Query: 84  NNQL 87
           N QL
Sbjct: 107 NKQL 110


>IMGA|Medtr5g049080.1 Transcription factor, K-box
          chr05_pseudomolecule_IMGAG_V3 20901480-20897129 H
          EGN_Mt090430 20090702
          Length = 128

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 45/63 (71%)

Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           L  ++ + +GE+L+ L + EL+ +E+Q+DS+LK IRS K Q M + +++LQKK++ L E
Sbjct: 17 ALQQTQRNILGEELEQLDINELEQIERQVDSSLKTIRSNKTQHMLDQLTDLQKKEEMLLE 76

Query: 83 QNN 85
           NN
Sbjct: 77 TNN 79


>IMGA|Medtr3g104190.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr03_pseudomolecule_IMGAG_V3
           25812647-25808917 E EGN_Mt090430 20090702
          Length = 246

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  ++ + MGEDL  LS K+L+ LE+Q+DS+LK IRS + Q M + + +LQ+K+  L E 
Sbjct: 108 LQRTQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEA 167

Query: 84  NNQL 87
           N  L
Sbjct: 168 NRAL 171


>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3593718-3599199 E EGN_Mt090430 20090702
          Length = 245

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 43/64 (67%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  ++ + +GEDL  LS K+L+ LE+Q+DS+LK +RS K Q M + +++LQ K+  L E 
Sbjct: 104 LQRAQRNLLGEDLGPLSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEA 163

Query: 84  NNQL 87
           N  L
Sbjct: 164 NRSL 167


>IMGA|Medtr7g083450.1 Transcription factor, K-box
          chr07_pseudomolecule_IMGAG_V3 17811872-17810220 F
          EGN_Mt090430 20090702
          Length = 115

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 42/65 (64%)

Query: 23 VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
          +L  SK   MGE L S SL ELQ +EQQ++ ++  +R+RKNQ     I +L++K+K L  
Sbjct: 6  LLEASKRKLMGEGLGSCSLDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVA 65

Query: 83 QNNQL 87
          +N +L
Sbjct: 66 ENARL 70


>IMGA|Medtr5g075960.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  S    MGE+L  L++KELQ LE Q++ +L+ +R +K Q   + I EL +K   + ++
Sbjct: 47  LQESHRQIMGEELSGLTVKELQGLENQLEISLRGVRMKKEQLFMDEIQELNRKGDIIHQE 106

Query: 84  NNQL 87
           N +L
Sbjct: 107 NVEL 110


>IMGA|Medtr2g010020.1 Transcription factor, K-box
          chr02_pseudomolecule_IMGAG_V3 2311955-2312917 H
          EGN_Mt090430 20090702
          Length = 121

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 24 LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
          L  S    MGE L  L +KELQNLE Q++ +LK +R +K+  +   I EL +K   + ++
Sbjct: 36 LQESHRQLMGEGLSGLGIKELQNLENQLEISLKGVRMKKDHILTNEIKELHQKGNLVHQE 95

Query: 84 NNQL 87
          N +L
Sbjct: 96 NVEL 99


>IMGA|Medtr5g033820.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           13797730-13788961 E EGN_Mt090430 20090702
          Length = 227

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query: 33  GEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQL 87
           GEDL  LSL+ELQ LE+ ++  L  +   K +++   I+ELQ K + L E+NN+L
Sbjct: 113 GEDLQGLSLEELQQLEKSLEIGLGRVIETKGEKIMMEINELQTKGRQLMEENNRL 167