Jatropha Genome Database

JcCB0103441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103441.10 - phase: 0 
         (274 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g102020.1 Thioredoxin-like fold chr08_pseudomolecule_...   365   e-101
IMGA|Medtr7g120730.1 Thioredoxin-like fold chr07_pseudomolecule_...    84   7e-17
IMGA|Medtr7g120730.2 Thioredoxin-like fold chr07_pseudomolecule_...    83   1e-16
IMGA|Medtr7g120730.3 Thioredoxin-like fold chr07_pseudomolecule_...    50   1e-06

>IMGA|Medtr8g102020.1 Thioredoxin-like fold
           chr08_pseudomolecule_IMGAG_V3 22256169-22261365 F
           EGN_Mt090430 20090702
          Length = 251

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/258 (69%), Positives = 206/258 (79%), Gaps = 21/258 (8%)

Query: 20  FPFLK--TPKFPSQYPSHPTVYSPKSTNASTLTTAFNTTKSRLVL--RASASDFGSYIGE 75
           FPF    TP     YPS    Y+PKS   +T  ++F  T+++ +L  RA  S++   + E
Sbjct: 10  FPFHPSITPPNSHTYPSSTVHYTPKS---NTFNSSFIATRNKRLLSSRALNSEYSPTVAE 66

Query: 76  SLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKSKFESAGV 135
           +LGDV+IFTAAGE V+ KDLWDQ +GIAVVALLRHFGCPCCWELAS LKESKS+F++AGV
Sbjct: 67  NLGDVSIFTAAGESVLFKDLWDQEQGIAVVALLRHFGCPCCWELASTLKESKSRFDAAGV 126

Query: 136 KLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPASVLICTW 195
           KLIA+GVGAPNKARILA+RLPFPMDCLYADPDRKAY+   LYYGFGRTFFNPAS      
Sbjct: 127 KLIAVGVGAPNKARILAERLPFPMDCLYADPDRKAYNFFDLYYGFGRTFFNPAS------ 180

Query: 196 HATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFKGKQLLYARKDEGT 255
                   A V SRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVF+GK+LLYARKDEGT
Sbjct: 181 --------ASVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELLYARKDEGT 232

Query: 256 GDHAPLDDVFNICCKVPI 273
           GDHAPLDDVF++CCKVP+
Sbjct: 233 GDHAPLDDVFDVCCKVPV 250


>IMGA|Medtr7g120730.1 Thioredoxin-like fold
           chr07_pseudomolecule_IMGAG_V3 28254124-28257044 E
           EGN_Mt090430 20090702
          Length = 248

 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 20/203 (9%)

Query: 69  FGSYIGESLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASVLKESKS 128
            G     SL  V +F   G  + I DLW   +  AVVA  RHFGC  C + A  L   K 
Sbjct: 63  LGDDTSSSLELVKVFDLEGNGIPISDLWKDRK--AVVAFARHFGCVLCRKRADYLASKKD 120

Query: 129 KFESAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGRTFFNPA 188
             +++GV L+ IG G  ++A+  A++  F  + +YADP + +Y+ L    G   TF   A
Sbjct: 121 IMDASGVALVLIGPGNIDQAKAFAEQTKFKGE-IYADPAQSSYEALKFVSGVLTTFTPKA 179

Query: 189 SVLICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFK-GK-QL 246
            + I   +     +  K+    D + +               G  QQGG+ V   GK  +
Sbjct: 180 GLKIIELYMEGYRQDWKLSFEKDTVSR---------------GGWQQGGIIVAGPGKGNI 224

Query: 247 LYARKDEGTGDHAPLDDVFNICC 269
            Y  KD+  GD   ++D+   CC
Sbjct: 225 SYIHKDKEAGDDPEIEDILKACC 247


>IMGA|Medtr7g120730.2 Thioredoxin-like fold
           chr07_pseudomolecule_IMGAG_V3 28254124-28257044 E
           EGN_Mt090430 20090702
          Length = 229

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 20/209 (9%)

Query: 63  RASASDFGSYIGESLGDVTIFTAAGEPVMIKDLWDQNEGIAVVALLRHFGCPCCWELASV 122
           R  +   G     SL  V +F   G  + I DLW   +  AVVA  RHFGC  C + A  
Sbjct: 38  RVKSPVLGDDTSSSLELVKVFDLEGNGIPISDLWKDRK--AVVAFARHFGCVLCRKRADY 95

Query: 123 LKESKSKFESAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYYGFGR 182
           L   K   +++GV L+ IG G  ++A+  A++  F  + +YADP + +Y+ L    G   
Sbjct: 96  LASKKDIMDASGVALVLIGPGNIDQAKAFAEQTKFKGE-IYADPAQSSYEALKFVSGVLT 154

Query: 183 TFFNPASVLICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFK 242
           TF   A + I   +     +  K+    D + +               G  QQGG+ V  
Sbjct: 155 TFTPKAGLKIIELYMEGYRQDWKLSFEKDTVSR---------------GGWQQGGIIVAG 199

Query: 243 -GK-QLLYARKDEGTGDHAPLDDVFNICC 269
            GK  + Y  KD+  GD   ++D+   CC
Sbjct: 200 PGKGNISYIHKDKEAGDDPEIEDILKACC 228


>IMGA|Medtr7g120730.3 Thioredoxin-like fold
           chr07_pseudomolecule_IMGAG_V3 28254124-28257044 E
           EGN_Mt090430 20090702
          Length = 161

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 18/153 (11%)

Query: 119 LASVLKESKSKFESAGVKLIAIGVGAPNKARILADRLPFPMDCLYADPDRKAYDVLGLYY 178
           L  +L   +   +++GV L+ IG G  ++A+  A++  F  + +YADP + +Y+ L    
Sbjct: 24  LVLILLYQQDIMDASGVALVLIGPGNIDQAKAFAEQTKFKGE-IYADPAQSSYEALKFVS 82

Query: 179 GFGRTFFNPASVLICTWHATTCLEQAKVFSRFDALQKAVKNYTIEATPDDRSGVLQQGGM 238
           G   TF   A + I   +     +  K+    D + +               G  QQGG+
Sbjct: 83  GVLTTFTPKAGLKIIELYMEGYRQDWKLSFEKDTVSR---------------GGWQQGGI 127

Query: 239 FVFK-GK-QLLYARKDEGTGDHAPLDDVFNICC 269
            V   GK  + Y  KD+  GD   ++D+   CC
Sbjct: 128 IVAGPGKGNISYIHKDKEAGDDPEIEDILKACC 160