Jatropha Genome Database

JcCB0103411.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103411.10 + phase: 0 /partial
         (323 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g080310.1 Aminotransferase, class I and II; chr05_pse...   116   2e-26
IMGA|Medtr5g080310.2 Aminotransferase, class I and II; chr05_pse...   108   5e-24
IMGA|Medtr1g024020.1 Aminotransferase, class I and II; chr01_pse...   100   8e-22
IMGA|Medtr3g009380.1 Aminotransferase, class I and II; chr03_pse...    85   4e-17

>IMGA|Medtr5g080310.1 Aminotransferase, class I and II;
           chr05_pseudomolecule_IMGAG_V3 30042155-30035289 F
           EGN_Mt090430 20090702
          Length = 479

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 10/229 (4%)

Query: 98  NVKRCLNLGSYNYLGFAAADEY---CTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKC 154
           N K  +N  S NYLG     +    CT     +L+KY   +C  R   GT  +H + E  
Sbjct: 107 NGKEVINFASANYLGLIGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEAR 162

Query: 155 VADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVFQH 214
           +A F+G P +I++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+H
Sbjct: 163 IAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKH 222

Query: 215 NTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTY 274
           N    LEE L +  +  +   H    +  ++VE +Y   G++  L +II + +KY+    
Sbjct: 223 NDMDSLEETLEKLTSKYK---HTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRIL 279

Query: 275 LDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGS 323
           LDE++S G +G SGRG+ E  GV    +D++      +  + GG+  GS
Sbjct: 280 LDESNSFGVLGSSGRGLTEHYGVPVEKLDLITAAMGHALATEGGFCTGS 328


>IMGA|Medtr5g080310.2 Aminotransferase, class I and II;
           chr05_pseudomolecule_IMGAG_V3 30042437-30035289 F
           EGN_Mt090430 20090702
          Length = 343

 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 98  NVKRCLNLGSYNYLGFAAADEY---CTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKC 154
           N K  +N  S NYLG     +    CT     +L+KY   +C  R   GT  +H + E  
Sbjct: 107 NGKEVINFASANYLGLIGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEAR 162

Query: 155 VADFVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVFQH 214
           +A F+G P +I++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+H
Sbjct: 163 IAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKH 222

Query: 215 NTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTY 274
           N    LEE L +  +  +   H    +  ++VE +Y   G++  L +II + +KY+    
Sbjct: 223 NDMDSLEETLEKLTSKYK---HTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRIL 279

Query: 275 LDEAHSIGAVGKSGRGVCELLGVDTADVDIMMG 307
           LDE++S G +G SGRG+ E  GV     ++ +G
Sbjct: 280 LDESNSFGVLGSSGRGLTEHYGVPVCTENLRLG 312


>IMGA|Medtr1g024020.1 Aminotransferase, class I and II;
           chr01_pseudomolecule_IMGAG_V3 5525553-5529190 E
           EGN_Mt090430 20090702
          Length = 304

 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 4/200 (2%)

Query: 98  NVKRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVAD 157
           N K  +N  S NYLG     +        +L+KY   +C  R   GT  +H + E  ++ 
Sbjct: 107 NGKEVVNFASANYLGLIGHQKLLD-SCSSALEKYGVGSCGPRGFYGTIDVHLDCEGRISK 165

Query: 158 FVGKPAAIVFGMGYVTNSAILPVLIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTP 217
           F+G P +I++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN  
Sbjct: 166 FLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNNM 225

Query: 218 SHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDE 277
             L E L E I     RT +  ++ IVI E +Y   G++  L EII + +KY     LDE
Sbjct: 226 DSLRETL-ENITSIYKRT-KNLRRYIVI-EALYQNSGQIAPLDEIIKLKEKYCFRILLDE 282

Query: 278 AHSIGAVGKSGRGVCELLGV 297
           ++S G +G SGRG+ E  GV
Sbjct: 283 SNSFGVLGSSGRGLTEHYGV 302


>IMGA|Medtr3g009380.1 Aminotransferase, class I and II;
           chr03_pseudomolecule_IMGAG_V3 1348998-1344040 H
           EGN_Mt090430 20090702
          Length = 408

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 47/248 (18%)

Query: 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSPSTCSSRVDAGTTALHNELEKCVADFVGKP 162
           L L S+  +G AAA         ++ +++      S +  G T  H +LE  +AD   K 
Sbjct: 37  LGLSSHPTIGKAAA---------KAAQEHGMGPRGSALICGYTNYHRQLESSLADLKKKE 87

Query: 163 A---------AIVFGMGYVTNSAILPVLIGKGGL--------------IISDSLNHNSIV 199
           +          ++   G+  N A++  +   G L              + SD+LNH SI+
Sbjct: 88  SIWGKVMFKDCLLCPTGFAANMALMTAIGSIGSLLAGNSIPSDDEKIAVFSDALNHASII 147

Query: 200 NG----ARGSGATIRVFQHNTPSHLEEVLREQIADGQPRTHRPWKKIIVIVEGIYSMEGE 255
           +G     R  G  + V++H   SHL  +L          +H   K+ IVI + ++SM+G+
Sbjct: 148 DGIRLAERRKGVKLYVYRHCDMSHLHTLL----------SHCSMKRKIVITDSLFSMDGD 197

Query: 256 LCKLPEIIAICKKYKAYTYLDEAHSIGAVGKSGRGVCELLGVDTADVDIMMGTFTKSFGS 315
              + E+  + KK+     +D+AH     GK+G GV E    +  DVDI +GT +K+ G 
Sbjct: 198 FAPMVELAELRKKHGFLLVIDDAHGTFVCGKNGGGVAEEFNCEK-DVDICIGTLSKAAGC 256

Query: 316 CGGYIAGS 323
            GG+IA S
Sbjct: 257 HGGFIACS 264