Jatropha Genome Database

JcCB0103361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103361.10 - phase: 0 
         (468 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g039530.1 Citrate transporter chr08_pseudomolecule_IM...   516   e-146

>IMGA|Medtr8g039530.1 Citrate transporter
           chr08_pseudomolecule_IMGAG_V3 8311322-8307970 E
           EGN_Mt090430 20090702
          Length = 544

 Score =  516 bits (1328), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/542 (52%), Positives = 349/542 (64%), Gaps = 74/542 (13%)

Query: 1   MAATVKMILGSFAFAIFWVLAVFPAIPILPIGRTAGSLLAAVLMVIFQVITPTEAYSSID 60
           +A   K++LGS AFAIFW+LAVFPA+P LPIGRTAGSLL A+LMVIF+VI+P EAY++ID
Sbjct: 3   LAPIPKVVLGSIAFAIFWILAVFPAVPFLPIGRTAGSLLGAMLMVIFRVISPDEAYAAID 62

Query: 61  ISILALLFGTMVVSVYLERADAFKYLGKLLSWKSLGAKDLIFRVCLVSAITSAFFTNDTS 120
           + IL LLFGTMVVSVYLERAD FKY+GKLLSWKS G KDL+ R+CL+SA++SAFFTNDTS
Sbjct: 63  LPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSKGPKDLLCRICLISALSSAFFTNDTS 122

Query: 121 CIVLTQMVLKIARQRNLPPHPFLLXXXXXXXXXXXXTPIGNPQNLIIALNGDISFWPFLG 180
           C+VLT+ VLKIA+Q NLPP PFLL            TPIGNPQNL+IA+   ISF  FL 
Sbjct: 123 CVVLTEFVLKIAKQHNLPPQPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGEFLL 182

Query: 181 GIFPAAVVXXXXXXXXXXCMYWKQLSSQKXXXXXXXXXXXXXXXXYHR------------ 228
           GI PA ++           MYWK LS  K                 H+            
Sbjct: 183 GIVPAMLIGVVVNALILIAMYWKLLSVHKDIEDPTAEVAAEEEVNSHKFSPATMSHYSSA 242

Query: 229 LNCQEICLGL----DMQSSPYVL--ENLAALSNGVLER-----------SSAASK----- 266
           LN QE+   L     +Q+SP V    N    S+G ++R           +S ASK     
Sbjct: 243 LNSQELNGYLVEPCSIQNSPQVHNPRNRLISSDGEIDRFHVGSTTDSARNSTASKEGTNN 302

Query: 267 ----------------------------------------WKALIWKSCVYLVTIGMLIA 286
                                                   WK  +WKSCVY++T+GMLIA
Sbjct: 303 DLASQTKEETSPTKTVVEVDRTTEGHDLISSEGKEYLSAEWKRRLWKSCVYMITLGMLIA 362

Query: 287 LLMGVNISWTALTAALSLMVLDFKDAQPCLEKVSYSLLVFFCGLFMTITGFEKTGIPSYL 346
           +L+G+N+SWTA++AAL+L+VLDFKDA P LEKVSYSLL+FFCG+F+T+ GF KTGIPS L
Sbjct: 363 MLLGLNLSWTAISAALALIVLDFKDAGPPLEKVSYSLLIFFCGMFITVNGFNKTGIPSAL 422

Query: 347 WEFLEPYAHIDHASGITVLAXXXXXXXXXXXXVTTVLLLGGRVAASAASISPTYVKKAWL 406
           WE +EPY+ +D +SGI +L+            V TVLLLG RVAASAA+IS    K+AWL
Sbjct: 423 WEMMEPYSRVDRSSGIAILSLVILVLSNLASNVPTVLLLGARVAASAAAISQEDQKRAWL 482

Query: 407 VLAWVSTASGNFTLVGSAANMIVCEQARNAPNFGCNLSFFGHLKFGLPSTILVTAIGLTL 466
           +LAWVST +GN +L+GSAAN+IVCEQAR APN    L+F+ HLKFGLPSTI+VTAIGLTL
Sbjct: 483 ILAWVSTTAGNLSLLGSAANLIVCEQARRAPNLSYTLTFWSHLKFGLPSTIIVTAIGLTL 542

Query: 467 IH 468
           I 
Sbjct: 543 IR 544