Jatropha Genome Database
- JcCB0101961.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0101961.10 - phase: 0 /partial
(395 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g025180.1 Homeodomain-like; chr01_pseudomolecule_IMGA... 91 1e-18
IMGA|Medtr2g104300.1 Homeodomain-related; chr02_pseudomolecule_I... 69 4e-12
IMGA|Medtr3g068960.1 Homeodomain-related; chr03_pseudomolecule_I... 62 5e-10
IMGA|Medtr3g068970.1 Homeodomain-related; chr03_pseudomolecule_I... 62 7e-10
IMGA|Medtr5g071810.1 Homeodomain-related; chr05_pseudomolecule_I... 57 2e-08
IMGA|Medtr5g095190.1 Homeodomain-related; chr05_pseudomolecule_I... 53 3e-07
IMGA|Medtr5g095130.1 Homeodomain-related; chr05_pseudomolecule_I... 53 3e-07
IMGA|Medtr5g095740.1 Homeodomain-related; chr05_pseudomolecule_I... 53 3e-07
IMGA|Medtr1g100140.1 Homeodomain-like; chr01_pseudomolecule_IMGA... 49 3e-06
>IMGA|Medtr1g025180.1 Homeodomain-like;
chr01_pseudomolecule_IMGAG_V3 6192054-6195291 E
EGN_Mt090430 20090702
Length = 444
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 42/239 (17%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCLQVLNGSQESQDMGTLQSTDTHGSNLI 60
LPGRTDNEIKN+WNTR K+ RA LPIYP ++ + L +QE+ DM T +++
Sbjct: 141 LPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSECL-LNQENADMLTNEAS-------- 191
Query: 61 QNDHFE--IPEVEFKNLELNRGLLSYSPTVLDISQSSMLKQGVSPSHSNNFMFPAMHPAK 118
Q+D E +PEV FK+ +L +L P D + +L + P+K
Sbjct: 192 QHDEAENKVPEVIFKDYKLRPDIL---PPCFDKLLAGLL----------------LRPSK 232
Query: 119 RLRESETIFPTLDCSVSSGLPVFIQSTDHFSEKIADSFGVSSRCVPHT----NTYGQPSL 174
R +S+ + S ++ P + S PH+ N Y P
Sbjct: 233 RPWKSDMNLYSY--SNNAAAPAAFDQLRKYPMPSPSSPPWEDINEPHSYNQFNEYDNP-- 288
Query: 175 GVLSGIHALLNDNSSSSEPFCGLMKLELPSLQYSETQQDSWGMPASPLPSLESVDTLIQ 233
+ GIH + +SS EP G MK E PSLQYS+TQ S+ +P + ++SV T ++
Sbjct: 289 --MVGIH--MAPKTSSFEPIYGFMKTEPPSLQYSQTQHRSYMIPYPQVEPVQSVPTSLE 343
>IMGA|Medtr2g104300.1 Homeodomain-related;
chr02_pseudomolecule_IMGAG_V3 24535716-24532678 H
EGN_Mt090430 20090702
Length = 459
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCLQVL 37
LPGRTDNEIKN+WNTR+KR QRAGLP+YPPE+ + +
Sbjct: 113 LPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEIQAEAI 149
>IMGA|Medtr3g068960.1 Homeodomain-related;
chr03_pseudomolecule_IMGAG_V3 16390027-16386600 E
EGN_Mt090430 20090702
Length = 555
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 27/31 (87%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPE 31
LPGRTDNEIKNYWNTRIKR QR GLP+Y E
Sbjct: 125 LPGRTDNEIKNYWNTRIKRRQRQGLPLYSDE 155
>IMGA|Medtr3g068970.1 Homeodomain-related;
chr03_pseudomolecule_IMGAG_V3 16397878-16395069 E
EGN_Mt090430 20090702
Length = 530
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/31 (83%), Positives = 27/31 (87%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPE 31
LPGRTDNEIKNYWNTRIKR QR GLP+Y E
Sbjct: 124 LPGRTDNEIKNYWNTRIKRRQRQGLPLYSDE 154
>IMGA|Medtr5g071810.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 25502639-25501506 H
EGN_Mt090430 20090702
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 20/88 (22%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVCL-QVLNGSQESQDMGTLQSTDTHGSNL 59
LPGR+DN+IKN+WN R ++L+R GL +P + L LN SQ+ +D
Sbjct: 94 LPGRSDNDIKNFWNARKRKLERRGLSPFPDNMELDDELNSSQQIEDS------------- 140
Query: 60 IQNDHFEIPEVEFKNL-----ELNRGLL 82
Q D F IP+++F+ E+N LL
Sbjct: 141 -QEDEFHIPQLKFRKYPSIFDEINEKLL 167
>IMGA|Medtr5g095190.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 37713695-37712696 H
EGN_Mt090430 20090702
Length = 266
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 20/88 (22%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVC-LQVLNGSQESQDMGTLQSTDTHGSNL 59
LPGR+DN+IKN+WN R ++L++ GL +P + LN SQ+ +D
Sbjct: 97 LPGRSDNDIKNFWNARKRKLEKLGLSPFPDNMEPDHKLNSSQQVEDS------------- 143
Query: 60 IQNDHFEIPEVEFKNL-----ELNRGLL 82
Q D F IP+++F+ E+N LL
Sbjct: 144 -QEDEFNIPQLKFRKYPSIFDEINEKLL 170
>IMGA|Medtr5g095130.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 37703600-37704599 H
EGN_Mt090430 20090702
Length = 266
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 20/88 (22%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVC-LQVLNGSQESQDMGTLQSTDTHGSNL 59
LPGR+DN+IKN+WN R ++L++ GL +P + LN SQ+ +D
Sbjct: 97 LPGRSDNDIKNFWNARKRKLEKLGLSPFPDNMEPDHKLNSSQQVEDS------------- 143
Query: 60 IQNDHFEIPEVEFKNL-----ELNRGLL 82
Q D F IP+++F+ E+N LL
Sbjct: 144 -QEDEFNIPQLKFRKYPSIFDEINEKLL 170
>IMGA|Medtr5g095740.1 Homeodomain-related;
chr05_pseudomolecule_IMGAG_V3 37951735-37952762 H
EGN_Mt090430 20090702
Length = 275
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 20/88 (22%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPPEVC-LQVLNGSQESQDMGTLQSTDTHGSNL 59
LPGR+DN+IKN+WN R ++L++ GL +P + LN SQ+ +D
Sbjct: 97 LPGRSDNDIKNFWNARKRKLEKLGLSPFPDNMEPDHKLNSSQQVEDS------------- 143
Query: 60 IQNDHFEIPEVEFKNL-----ELNRGLL 82
Q D F IP+++F+ E+N LL
Sbjct: 144 -QEDEFNIPQLKFRKYPSIFDEINEKLL 170
>IMGA|Medtr1g100140.1 Homeodomain-like;
chr01_pseudomolecule_IMGAG_V3 20682679-20680237 E
EGN_Mt090430 20090702
Length = 409
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIYPP--------------EVCLQVLNGSQESQDM 46
LPGR NEI NY N R K+ RA LP+Y E CL L+ ++
Sbjct: 234 LPGRRGNEIDNYHNIRTKKRARASLPLYDQIINLCDFELNDINGETCLDGLSNQHQAHVS 293
Query: 47 GTLQSTDTHGSNLIQ 61
+ +DTHGSN Q
Sbjct: 294 QQVHKSDTHGSNFEQ 308
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 LPGRTDNEIKNYWNTRIKRLQRAGLPIY 28
LPGRTDNEIKN+WN R ++ + GLP+Y
Sbjct: 96 LPGRTDNEIKNFWNIRTRKRTKLGLPLY 123