Jatropha Genome Database
- JcCB0100701.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0100701.10 - phase: 0
(240 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g137730.1 UDP-glucose 4-epimerase chr04_pseudomolecul... 350 3e-97
IMGA|Medtr5g009210.1 UDP-glucose 4-epimerase chr05_pseudomolecul... 134 3e-32
IMGA|Medtr4g137730.2 UDP-glucose 4-epimerase chr04_pseudomolecul... 131 3e-31
IMGA|Medtr5g009200.1 UDP-glucose 4-epimerase chr05_pseudomolecul... 127 4e-30
IMGA|Medtr5g009200.2 UDP-glucose 4-epimerase chr05_pseudomolecul... 74 7e-14
IMGA|Medtr1g010610.1 NAD-dependent epimerase/dehydratase chr01_p... 70 9e-13
IMGA|Medtr5g012090.1 NAD-dependent epimerase/dehydratase chr05_p... 65 2e-11
IMGA|Medtr4g025510.1 NAD-dependent epimerase/dehydratase; TonB b... 64 7e-11
IMGA|Medtr3g105090.1 NAD-dependent epimerase/dehydratase; TonB b... 62 2e-10
IMGA|Medtr7g081170.1 NAD-dependent epimerase/dehydratase chr07_p... 48 3e-06
IMGA|Medtr7g081180.1 NAD-dependent epimerase/dehydratase chr07_p... 47 7e-06
IMGA|Medtr7g081140.1 NAD-dependent epimerase/dehydratase chr07_p... 47 7e-06
>IMGA|Medtr4g137730.1 UDP-glucose 4-epimerase
chr04_pseudomolecule_IMGAG_V3 33993450-33997060 E
EGN_Mt090430 20090702
Length = 397
Score = 350 bits (899), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 171/230 (74%), Positives = 193/230 (83%), Gaps = 11/230 (4%)
Query: 19 LGGLDYADPKRKGNIVGKIFLAAALTALCIIMLKQSPTFNTRSLFSVHEEGVTHVLVTGG 78
+G ++YADPK+KGN VGKIFLAAALT+LCIIM+K+SP+ + S F+ HE GVTHVLVTGG
Sbjct: 1 MGSMEYADPKKKGNFVGKIFLAAALTSLCIIMIKRSPSLKSPSPFAFHEPGVTHVLVTGG 60
Query: 79 AGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLGDAKAVN 138
AGYIGSHAA RLLKD YRVTIVDNLSRGNLGAV+VLQ+LFPEPGRLQFIYADLGD K+VN
Sbjct: 61 AGYIGSHAAFRLLKDNYRVTIVDNLSRGNLGAVRVLQDLFPEPGRLQFIYADLGDKKSVN 120
Query: 139 KIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCA 198
KIF EN FDAVMHFAAVAYVGEST+DPLKYYHNITSNTL+VLESMA HDVKTLIYSSTCA
Sbjct: 121 KIFLENKFDAVMHFAAVAYVGESTVDPLKYYHNITSNTLLVLESMAKHDVKTLIYSSTCA 180
Query: 199 TYGEPEKMPITEDTPQV-----------IAEILRVYVNQFDLCVCLIKIF 237
TYGEPEKMPITE TPQV +I+ + D+ V +++ F
Sbjct: 181 TYGEPEKMPITEVTPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 230
>IMGA|Medtr5g009210.1 UDP-glucose 4-epimerase
chr05_pseudomolecule_IMGAG_V3 1959897-1955975 F
EGN_Mt090430 20090702
Length = 392
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 93/142 (65%), Gaps = 1/142 (0%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGR-LQFIYADL 131
VLVTGGAGYIGSH L+LL G++ IVDNL + AV+ ++EL E G+ L F DL
Sbjct: 49 VLVTGGAGYIGSHTVLQLLLGGFKTVIVDNLDNSSEVAVRRVKELAAEFGKNLNFHKVDL 108
Query: 132 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTL 191
D A+ +IFS FDAV+HFA + VGES PL YY+N T+ +LE MAAH K L
Sbjct: 109 RDKAALEQIFSSTKFDAVIHFAGMKAVGESVQKPLLYYNNNLIGTITLLEVMAAHGCKKL 168
Query: 192 IYSSTCATYGEPEKMPITEDTP 213
++SS+ YG P+++P TE+ P
Sbjct: 169 VFSSSATVYGWPKEVPCTEEFP 190
>IMGA|Medtr4g137730.2 UDP-glucose 4-epimerase
chr04_pseudomolecule_IMGAG_V3 33992473-33997060 E
EGN_Mt090430 20090702
Length = 266
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 75/99 (75%), Gaps = 11/99 (11%)
Query: 150 MHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCATYGEPEKMPIT 209
MHFAAVAYVGEST+DPLKYYHNITSNTL+VLESMA HDVKTLIYSSTCATYGEPEKMPIT
Sbjct: 1 MHFAAVAYVGESTVDPLKYYHNITSNTLLVLESMAKHDVKTLIYSSTCATYGEPEKMPIT 60
Query: 210 EDTPQV-----------IAEILRVYVNQFDLCVCLIKIF 237
E TPQV +I+ + D+ V +++ F
Sbjct: 61 EVTPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYF 99
>IMGA|Medtr5g009200.1 UDP-glucose 4-epimerase
chr05_pseudomolecule_IMGAG_V3 1955431-1951450 E
EGN_Mt090430 20090702
Length = 349
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGR-LQFIYADL 131
VLVTGGAGYIGSH L+LL G++ +VDNL + A+ ++EL E G L F DL
Sbjct: 6 VLVTGGAGYIGSHTVLQLLLGGFKSIVVDNLDNSSEVAIHRVKELAGEFGNNLSFHKVDL 65
Query: 132 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTL 191
D A+ +IF FDAV+HFA + VGES PL YY+N T+ +LE MAAH K L
Sbjct: 66 RDRAALEQIFGSTTFDAVIHFAGLKAVGESAQKPLLYYNNNLIGTITLLEVMAAHGCKKL 125
Query: 192 IYSSTCATYGEPEKMPITEDTP 213
++SS+ YG P+++P TE+ P
Sbjct: 126 VFSSSATVYGWPKEVPCTEEFP 147
>IMGA|Medtr5g009200.2 UDP-glucose 4-epimerase
chr05_pseudomolecule_IMGAG_V3 1955431-1951450 E
EGN_Mt090430 20090702
Length = 286
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 146 FDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHDVKTLIYSSTCATYGEPEK 205
FDAV+HFA + VGES PL YY+N T+ +LE MAAH K L++SS+ YG P++
Sbjct: 17 FDAVIHFAGLKAVGESAQKPLLYYNNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKE 76
Query: 206 MPITEDTP 213
+P TE+ P
Sbjct: 77 VPCTEEFP 84
>IMGA|Medtr1g010610.1 NAD-dependent epimerase/dehydratase
chr01_pseudomolecule_IMGAG_V3 1813470-1815842 E
EGN_Mt090430 20090702
Length = 655
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 72 HVLVTGGAGYIGSHAALRLLKD--GYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYA 129
++L+TG AG+I SH R++ Y++ +D L K LQ P + +FI
Sbjct: 6 NILITGAAGFIASHVTTRIINKYPSYKIVALDKLDY--CSTFKNLQSCTSSP-KFKFIKG 62
Query: 130 DLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAHD-V 188
D+ VN + E D +MHFAA +V S + +++ +N T V+LE+ A + V
Sbjct: 63 DIASVDIVNHVLIEEEIDTIMHFAAQTHVDNSFGNSMEFTYNNIYGTHVLLEACRATNCV 122
Query: 189 KTLIYSSTCATYGEPE 204
K I+ ST YGE +
Sbjct: 123 KRFIHVSTDEVYGETD 138
>IMGA|Medtr5g012090.1 NAD-dependent epimerase/dehydratase
chr05_pseudomolecule_IMGAG_V3 3397353-3393321 E
EGN_Mt090430 20090702
Length = 430
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSR-GNLGAVKVLQELFPEPGRLQFIYADL 131
VLVTG +G++G H +L L + G V +DN +R ++ + ++ G + + D+
Sbjct: 92 VLVTGASGFVGMHVSLALKRRGDGVLGIDNFNRYYDINLKRTRAKVLSRAG-VFVVEGDI 150
Query: 132 GDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHDVKT 190
D + K+F AF VMH AA A V + +P Y H+ + + +LE S +A+
Sbjct: 151 NDVHLLRKLFDVVAFTHVMHLAAQAGVRYAMRNPNSYVHSNIAGFVNLLEVSKSANPQPA 210
Query: 191 LIYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQFDLCVCLIKIFL 238
++Y+S+ + YG K P +E D P + E Y + + L V ++ F
Sbjct: 211 IVYASSSSVYGLNSKTPFSEKDRTDQPASLYAATKKAGEEFAHTYNHIYGLSVTGLRFFT 270
Query: 239 WY 240
Y
Sbjct: 271 VY 272
>IMGA|Medtr4g025510.1 NAD-dependent epimerase/dehydratase; TonB box,
N-terminal chr04_pseudomolecule_IMGAG_V3 6096714-6094645
E EGN_Mt090430 20090702
Length = 440
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 13/194 (6%)
Query: 60 RSLFSVHEEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFP 119
RS V VLVTG AG++G+H + L + G V +DN + ++K ++
Sbjct: 90 RSSARVRSRNGFSVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQALL 149
Query: 120 EPGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVV 179
E + + D+ DA + K+F F VMH AA A V + +P Y H+ + + +
Sbjct: 150 ERTGVFIVEGDINDAALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNL 209
Query: 180 LE-SMAAHDVKTLIYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQ 226
LE + + +++++S+ + YG K+P +E D P + EI Y +
Sbjct: 210 LEVCKSVNPQPSIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHI 269
Query: 227 FDLCVCLIKIFLWY 240
+ L + ++ F Y
Sbjct: 270 YGLSLTGLRFFTVY 283
>IMGA|Medtr3g105090.1 NAD-dependent epimerase/dehydratase; TonB box,
N-terminal chr03_pseudomolecule_IMGAG_V3
26213261-26214788 F EGN_Mt090430 20090702
Length = 447
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 73 VLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQFIYADLG 132
VLVTG AG++GSH +L L K G V +DN + ++K ++ ++ + DL
Sbjct: 101 VLVTGAAGFVGSHCSLALKKRGDGVIGLDNFNSYYDPSLKRARQALLTQHQIFIVEGDLN 160
Query: 133 DAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLE-SMAAHDVKTL 191
DA + K+F ++H AA A V + +P Y + + + +LE S AA+ +
Sbjct: 161 DAPLLTKLFDVVPITHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKAANPQPAI 220
Query: 192 IYSSTCATYGEPEKMPITE----DTPQVI--------AEILRVYVNQFDLCVCLIKIFLW 239
+++S+ + YG + P +E D P + EI Y + + L + ++ F
Sbjct: 221 VWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 280
Query: 240 Y 240
Y
Sbjct: 281 Y 281
>IMGA|Medtr7g081170.1 NAD-dependent epimerase/dehydratase
chr07_pseudomolecule_IMGAG_V3 17510976-17513829 E
EGN_Mt090430 20090702
Length = 329
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQF 126
E+G V VTGG G+IGS RLL+DGY V + G V L +L +LQ
Sbjct: 2 EKGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRSNPGQKKDVSFLTDLPNASQKLQI 61
Query: 127 IYADLGDAKAVN 138
ADL + ++ N
Sbjct: 62 FNADLSNPESFN 73
>IMGA|Medtr7g081180.1 NAD-dependent epimerase/dehydratase
chr07_pseudomolecule_IMGAG_V3 17518595-17523367 E
EGN_Mt090430 20090702
Length = 329
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 34/72 (47%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQF 126
EEG V VTGG G+IGS RLL+DGY V G V L L +L
Sbjct: 2 EEGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRADPGQNKDVSFLTNLPNATQKLNI 61
Query: 127 IYADLGDAKAVN 138
ADL + K+ N
Sbjct: 62 FNADLSNPKSFN 73
>IMGA|Medtr7g081140.1 NAD-dependent epimerase/dehydratase
chr07_pseudomolecule_IMGAG_V3 17485216-17488382 E
EGN_Mt090430 20090702
Length = 328
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Query: 67 EEGVTHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPEPGRLQF 126
EEG V VTGG G+IGS RLL+DGY V + G V L L LQ
Sbjct: 2 EEGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRSNPGQKKDVSYLTNLPNASQNLQI 61
Query: 127 IYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAH 186
ADL + ++ + + H A E+ + + I ++ +
Sbjct: 62 FNADLCNPESFDAAIE--GCIGIFHTATPIDFEENEREEIVTKRTIDGALGILKACKNSK 119
Query: 187 DVKTLIY-SSTCATYGEPEKMPITEDTPQVIAEILR 221
VK +IY SS A Y + ++ + +++ ILR
Sbjct: 120 TVKRVIYTSSASAVYMQDKEEDVMDESYWSDVNILR 155