Jatropha Genome Database

JcCB0099081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099081.10 + phase: 0 /partial
         (158 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g145580.1 Actin-binding FH2; C2 calcium/lipid-binding...   169   5e-43
IMGA|Medtr5g026810.1 Actin-binding FH2 chr05_pseudomolecule_IMGA...   162   5e-41
IMGA|Medtr1g016730.1 Actin-binding FH2; C2 calcium/lipid-binding...    91   3e-19
IMGA|Medtr1g016720.1 Formin-like protein 6, putative chr01_pseud...    76   5e-15

>IMGA|Medtr8g145580.1 Actin-binding FH2; C2 calcium/lipid-binding
            region, CaLB; chr08_pseudomolecule_IMGAG_V3
            35409574-35425027 E EGN_Mt090430 20090702
          Length = 1180

 Score =  169 bits (429), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 95/124 (76%)

Query: 1    VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
            VL  K P +LDF  DL +LEPA KIQLK LAEEMQA+ KGLEKV QEL+ SE DGP+SE 
Sbjct: 1020 VLDDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAVNKGLEKVVQELSTSENDGPISET 1079

Query: 61   FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
            FRK LK F+  AE EV ++ +LYS VG+N DAL LYFGEDP+RC FEQV  TLLNF R+F
Sbjct: 1080 FRKKLKGFLCSAEAEVRTLASLYSGVGKNVDALILYFGEDPSRCQFEQVVTTLLNFTRMF 1139

Query: 121  RKAH 124
             KAH
Sbjct: 1140 NKAH 1143


>IMGA|Medtr5g026810.1 Actin-binding FH2
           chr05_pseudomolecule_IMGAG_V3 10855138-10852228 E
           EGN_Mt090430 20090702
          Length = 284

 Score =  162 bits (411), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 96/124 (77%)

Query: 1   VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
           +LA K P L+DF  DLV LE A+KIQLK+LAEEMQA+ KGLEKV+QEL ASE DG +S  
Sbjct: 126 LLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGSISSG 185

Query: 61  FRKTLKEFISVAETEVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFVRLF 120
           FRK LK F+  AE +V S+ +LY+ VGRNAD+L+ YFGEDPARCPFEQVT  L+ FV+ F
Sbjct: 186 FRKVLKNFLDFAEADVRSLISLYADVGRNADSLSKYFGEDPARCPFEQVTQILVVFVKTF 245

Query: 121 RKAH 124
            K+ 
Sbjct: 246 NKSR 249


>IMGA|Medtr1g016730.1 Actin-binding FH2; C2 calcium/lipid-binding
            region, CaLB; chr01_pseudomolecule_IMGAG_V3
            3303853-3295156 H EGN_Mt090430 20090702
          Length = 1641

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 51/61 (83%)

Query: 1    VLAAKSPTLLDFHLDLVSLEPATKIQLKSLAEEMQAIIKGLEKVKQELAASEKDGPVSEV 60
            VLA K P LLDF  DLV+LE ATKIQLK LAEEMQAI KGLEKV QEL+ASE DGPVSEV
Sbjct: 1564 VLAEKLPELLDFSKDLVNLEGATKIQLKYLAEEMQAISKGLEKVIQELSASENDGPVSEV 1623

Query: 61   F 61
            F
Sbjct: 1624 F 1624


>IMGA|Medtr1g016720.1 Formin-like protein 6, putative
           chr01_pseudomolecule_IMGAG_V3 3295154-3294211 H
           EGN_Mt090430 20090702
          Length = 86

 Score = 76.3 bits (186), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 34/38 (89%)

Query: 87  GRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAH 124
           GRNADALA YFGEDP RCPFEQV ATL+NFVR+F +AH
Sbjct: 4   GRNADALASYFGEDPQRCPFEQVVATLMNFVRMFIRAH 41