Jatropha Genome Database
- JcCB0098751.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0098751.10 + phase: 1 /TE
(1323 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 351 1e-96
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 351 1e-96
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 320 2e-87
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 319 5e-87
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 296 5e-80
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 264 2e-70
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 194 2e-49
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 189 7e-48
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 189 7e-48
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 182 1e-45
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 166 1e-40
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 160 5e-39
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 159 6e-39
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 157 2e-38
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 142 9e-34
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 141 2e-33
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 139 1e-32
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 121 2e-27
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 118 2e-26
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 113 5e-25
IMGA|Medtr6g069750.1 Reverse transcriptase, putative chr06_pseud... 94 5e-19
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 93 1e-18
IMGA|Medtr6g077130.1 Zinc finger, CCHC-type chr06_pseudomolecule... 92 2e-18
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 88 2e-17
IMGA|Medtr8g128700.1 Integrase, catalytic region chr08_pseudomol... 88 3e-17
IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin, se... 83 7e-16
IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin, se... 83 7e-16
IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA po... 81 4e-15
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 80 7e-15
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 79 1e-14
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 72 3e-12
IMGA|Medtr3g044280.1 hypothetical retrotransposon, related chr03... 71 3e-12
IMGA|Medtr5g082230.1 hypothetical retrotransposon, related chr05... 71 3e-12
IMGA|Medtr4g104320.1 hypothetical protein chr04_pseudomolecule_I... 70 8e-12
IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA po... 65 2e-10
IMGA|Medtr3g097830.1 hypothetical protein chr03_pseudomolecule_I... 65 3e-10
IMGA|Medtr8g012170.1 polyprotein, putative chr08_pseudomolecule_... 64 7e-10
IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative chr... 62 2e-09
IMGA|Medtr3g044010.1 hypothetical protein chr03_pseudomolecule_I... 61 3e-09
IMGA|Medtr1g076760.1 hypothetical protein chr01_pseudomolecule_I... 61 4e-09
IMGA|Medtr4g019480.1 Integrase, catalytic region chr04_pseudomol... 59 1e-08
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 57 6e-08
IMGA|Medtr8g081950.1 lectin receptor kinase, related chr08_pseud... 56 1e-07
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 56 1e-07
IMGA|Medtr3g097840.1 hypothetical protein chr03_pseudomolecule_I... 54 7e-07
IMGA|Medtr5g089840.1 copia LTR rider, related chr05_pseudomolecu... 53 1e-06
IMGA|Medtr1g102740.1 gag-pol polyprotein, related chr01_pseudomo... 52 2e-06
IMGA|Medtr8g096240.1 hypothetical protein chr08_pseudomolecule_I... 52 3e-06
IMGA|Medtr6g086660.1 gag-pol polyprotein, related chr06_pseudomo... 51 3e-06
IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein, chr0... 50 9e-06
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 351 bits (901), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 261/895 (29%), Positives = 412/895 (46%), Gaps = 117/895 (13%)
Query: 289 WIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSVGCTLTLKNV 348
W +DSGA+ H V +F ++ + + + N + V G I +++V
Sbjct: 381 WFLDSGANEHIVSSTHWFTSFHKINPKPVNLPNGTSVLVEYAGTIHFTPH----FYIEDV 436
Query: 349 RHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLTKGSLVVARGKLCCSLY---KTHTIICA 405
+ P LNL+S+ K+C SL+ H C
Sbjct: 437 LYSPSFTLNLISI----------------------------FKVCSSLHCYASFHDKKCF 468
Query: 406 GQ-LNTVADDASPNLWHRRLAHVSERGLNMLAKKSLIP-LAKGKTNPCDYCLFGKQHRVS 463
Q L++ L HVS + LN ++ L P L CD C F KQ ++S
Sbjct: 469 LQDLHSQKMIGLGEQVRGLLGHVSNKRLNHMSH--LYPTLTVDNHATCDICQFAKQKKLS 526
Query: 464 FLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHF 523
F S +K EL+H D+ GP+ V S+ RYFLT +DD+S WI LL++K +V +H
Sbjct: 527 FPTSVSVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVSQHV 586
Query: 524 QQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMN 583
+ F ++ + + K +R+DNG E++ F Y S+ GI H K+ TPQ NG ER +
Sbjct: 587 KNFINLIHTQYHITPKVVRSDNGPEFLLNSF--YASK-GIVHHKSCVETPQQNGRVERKH 643
Query: 584 RTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLR 643
+ I+ R++L + LP +W A+ A+++IN + S L P ++ G +
Sbjct: 644 QHILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTFK 703
Query: 644 VFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHE--- 700
VFG + + R KL ++ F+ Y GY L D FHE
Sbjct: 704 VFGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEHIL 763
Query: 701 ----NEIVVDTTCEESTSDGVIDITPGSIPTDDATGGGMPESEREEXEPVIGDEETIVDD 756
N + TT + +SD P +P +P + P DD
Sbjct: 764 PYPTNPSTITTTWDYFSSDSCSASNP--LPKSSTISPIIPPPFIDVDTPP-------SDD 814
Query: 757 NSDTEGVELGEPENPITPXGVEPQLRRSTRECQPS----------------ARYRSSDYI 800
N + P+ P+ +R+S+R QP +Y S Y+
Sbjct: 815 NHSVSPI----PQPPV--------IRKSSRITQPPTHLQDYVCSVSDDTSFVQYPISHYL 862
Query: 801 L--------------ISDEGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTYEPVKLP 846
+ EP ++ + DCW++AMQ E+++L+ T++ V LP
Sbjct: 863 SYNNLSSSHCAFALSLDSHTEPTTYAEA---SKFDCWKQAMQVELSALENTGTWKLVDLP 919
Query: 847 KGKRTLKNKWVYKLKKD-DGNLVRYKARLVVKGFTQKKGIDFDEIFSPVVKMSSIRVVLG 905
+ + +W+YK+K DG++ RYKARLV KG+ Q +G+D+ + +SPV K++++R ++
Sbjct: 920 PNVKPIVCRWIYKIKHHADGSIERYKARLVAKGYNQIEGLDYFDTYSPVAKLTTVRTIIA 979
Query: 906 LVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGKEDMVCRLKKSLYGLKQAPRQ 965
L N + QLDV AFLHGDL+E++YM P+G K + VC+L KSLYGLKQA R+
Sbjct: 980 LAYMNNWHIHQLDVNNAFLHGDLQEDVYMIVPQGI-TPSKSNQVCKLIKSLYGLKQASRK 1038
Query: 966 WYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYVDDMLIVGPDAHMISKLKSDL 1025
WY+ S +V+ Y ++ +D ++++K + F LL+YVDD++I G +K+ L
Sbjct: 1039 WYEKLTSLLVHHHYLQSTSDHSLFIKK-TYTSFTALLVYVDDVIITGTSLSEFQDIKAIL 1097
Query: 1026 SKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIERVLERFNMKNAKSVSTPLAAHF 1085
A ++KDLG + L +E+ + L Q KY +L AK STP
Sbjct: 1098 HSALEIKDLGQLKYFLGLEVAHSSQGIS--LCQRKYCLDLLTDIGFLAAKPASTPSDPSC 1155
Query: 1086 KLSKKSYPSTEKEKGDMSNVP-YSSAIRSLMYAMVCTKPAIAHAVGVVSRFLSNP 1139
KL P S++P Y I L+Y + T+P I A +S+FL++P
Sbjct: 1156 KLHADGGPP-------FSDIPSYRRLIGRLIY-LTNTRPYITFATQQLSQFLNSP 1202
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 265/909 (29%), Positives = 413/909 (45%), Gaps = 104/909 (11%)
Query: 258 NTSATVSGVDGEVTLVTHDADYCHVGDANTEWIVDSGASYHCVPKREYFFTYKAGDFGTI 317
N T V ++ HD + + W++DSGA+ H +F + +
Sbjct: 354 NHVQTTPFVSNNISASPHDTE--GISSKPYYWLLDSGANEHICSNLSFFTSLHRIKPVRV 411
Query: 318 KMGNNSVSQVVGIGDICIKTSVGCTLTLKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGN 377
+ N + V G++ T +++ I L+ V G + +T +
Sbjct: 412 NLPNKTSIIVHFAGNVVFTPQFYLTNDQTSLKMIG------LAKQV---AGLYRYTPPSD 462
Query: 378 WKLTKGSLVVARGKLCCSLYKTHTIICAGQLNTVADDASPNLWHRRLAHVSERGLNMLAK 437
+ T SL+ + K C + I N + A LWH RL H+S + M+
Sbjct: 463 FSST--SLMHSPNKSC-----NFSSISCNSNNCIPVAA---LWHFRLGHLSNQ--RMIKM 510
Query: 438 KSLIP-LAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRY 496
L P + + CD C F KQ + F S EL+H D+ GP+ + S+ G RY
Sbjct: 511 SHLYPSIVHNNRDVCDICHFSKQKHLPFSSSLSHASTNFELLHFDIWGPISISSVHGHRY 570
Query: 497 FLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRD 556
FLT +DD SR WI LL++K +V H + F M+ + V K +R+DNG E++ D
Sbjct: 571 FLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFL---LND 627
Query: 557 YCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLIN 616
+ S HGI H+K+ TPQ NG ER ++ I+ R++L + LP FW A+ AV+LIN
Sbjct: 628 FYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAVFLIN 687
Query: 617 XLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQ--RLKLDDKSIPCTFVCYG 674
+P+ L P V F +P Q + KL ++ F+ Y
Sbjct: 688 RVPTHVLHNQSPYHV-----------------LFHKLPDIQLFKSKLQPRARKSLFLGYK 730
Query: 675 DEEFGYRLWDPXXXXXXXXXXXXFHEN---------------EIVVDTTCEESTSDGVID 719
GY L+D FHEN + +T E S S
Sbjct: 731 SGYKGYHLFDLSTREIFVSRHVIFHENILPYTFTTSSTTPSWDYFSPSTTETSHSPNNTP 790
Query: 720 ITP-GSIP-----TDDATGGGMP-ESEREEXEPVIGDEETIVDDNSDTEGVELGEPENPI 772
TP S+P + +P S R + P + NS T + N +
Sbjct: 791 STPSASLPHTQSSSPSVPVSHLPRHSTRNKISPSYLQDYVCNSINSTTYPISHYLSHNKL 850
Query: 773 TPXGVEPQLRRSTRECQPSARYRSSDYILISDEGEPESFQDVQSCKDRDCWRKAMQEEMN 832
+ + SS + + EP+++ + +CW+KAMQ E+
Sbjct: 851 -------------------SSHHSSYVLSLHTHNEPKTYAEA---NKHECWQKAMQVELQ 888
Query: 833 SLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD-DGNLVRYKARLVVKGFTQKKGIDFDEIF 891
+L++ T+ V LP + + +WV+K+K+ DG++ RYKARLV KG+TQ +G+D+ + F
Sbjct: 889 ALEQTGTWNFVDLPPNVKPIGCRWVFKIKRHADGSIERYKARLVAKGYTQVEGLDYFDTF 948
Query: 892 SPVVKMSSIRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGKEDMVCR 951
SPV K++++R+++ L + + L QLDV AFLHGDL+E +YM P G K + VC+
Sbjct: 949 SPVAKLTTVRLIIALASINHWHLHQLDVNNAFLHGDLQENVYMTLPPGISAK-HSNTVCK 1007
Query: 952 LKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYVDDMLIV 1011
L KSLYGLKQA R+WY S ++ Y + +D ++ +K + + ILL+YVDD+++
Sbjct: 1008 LNKSLYGLKQASRKWYDKLTSILLKHQYTQAHSDHSLFTKK-TGTSYTILLVYVDDIILA 1066
Query: 1012 GPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIERVLERFNM 1071
G +KS L F +KDLG + L +E+ + L Q+KY +L
Sbjct: 1067 GDSLEEFQYIKSILDTLFKIKDLGQLKFFLGLEVAHSQLGIS--LCQKKYCLDLLADSGT 1124
Query: 1072 KNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVP-YSSAIRSLMYAMVCTKPAIAHAVG 1130
+K STP KL K E ++P Y I L+Y + T+P I +
Sbjct: 1125 IGSKPASTPSDPSLKLHKDGALPYE-------DIPSYRRLIGRLLY-LNTTRPDITYITQ 1176
Query: 1131 VVSRFLSNP 1139
+S+FLS P
Sbjct: 1177 QLSQFLSAP 1185
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 222/738 (30%), Positives = 335/738 (45%), Gaps = 138/738 (18%)
Query: 457 GKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTK 516
+Q R+ F + EL+H D+ GP + + +YF+T +DDFS+ TW LL K
Sbjct: 2 ARQSRLPFPPKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSCK 61
Query: 517 DQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHN 576
F + F MVE + +K +R+DNG E+ S E + GI H+K+ P TPQ N
Sbjct: 62 SNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQN 121
Query: 577 GVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRN 636
GV ER ++ I+E R++L + LP +W E
Sbjct: 122 GVVERKHKFILETARALLFQSKLPVKYWSEF----------------------------- 152
Query: 637 ISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXX 696
R K D K+IP FV Y GY++ +
Sbjct: 153 --------------------HRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRDV 192
Query: 697 XFHENEIVVDTTCEESTSDGVIDITPGSIPTDDATGGGMP-ESEREEXEPVIGDEETIVD 755
FHE I P ++ D P P D++
Sbjct: 193 IFHET------------------IFPFAMSKDPTHFPKFPFHCVSLHDYPTSYDDQDYSS 234
Query: 756 DNSDTEGVELGEPENPITPXGVEP-------QLRRSTR---------------------- 786
+ T + PEN +P + P QLRRS R
Sbjct: 235 KETTTSPTHIT-PENSTSPTHITPENSTSIPQLRRSQRLHKTPTYLTDYVHNVPSSTVSN 293
Query: 787 --ECQPSA------------------RYRSSDYIL-ISDEGEPESFQDVQSCKDRDCWRK 825
QP + + S +I+ IS + EP S+++ W+K
Sbjct: 294 SQPPQPHSLPLNALFTLKHYVSPDVFSFDSQSFIMNISHDCEPNSYEEASM---DPAWQK 350
Query: 826 AMQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLK-KDDGNLVRYKARLVVKGFTQKKG 884
AM +E +L N+T+ LPK K+++ +WVYK+K K DG++ RYKARLVVKG+TQ G
Sbjct: 351 AMTQEFLALHDNNTWTLTNLPKDKKSVGCRWVYKVKHKADGSVERYKARLVVKGYTQHHG 410
Query: 885 IDFDEIFSPVVKMSSIRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKG 944
ID+ E FSPVVKM+++R ++ A + QLDV AFLHGDL EE+YM+ P G
Sbjct: 411 IDYTETFSPVVKMTTVRTLIVAAAKKQWNIHQLDVNNAFLHGDLHEEVYMDIPPGLATPH 470
Query: 945 KEDMVCRLKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLY 1004
K D+VC+L KSLYGLKQA RQWY+ + +GY+ + D ++ +K + L +Y
Sbjct: 471 K-DLVCKLNKSLYGLKQASRQWYEKLTEALHTRGYEHSPHDYSLFYKK-RGASNVFLGVY 528
Query: 1005 VDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIER 1064
VDD+L+ G D + I +LK L F +KDLG L +E++ K + +SQ K++
Sbjct: 529 VDDILLTGTDTNEIDELKRFLDNQFKIKDLGRLHYFLGLEVL--YKDDGILVSQRKFVLD 586
Query: 1065 VLERFNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVP--YSSAIRSLMYAMVCTK 1122
+L+ FN + +S+PL + KL +G + + P Y I L + + T+
Sbjct: 587 LLKEFNCDHMAPLSSPLDPNIKL--------RSHEGKVLDDPTYYRKLIGKLNF-LTHTR 637
Query: 1123 PAIAHAVGVVSRFLSNPR 1140
+A+ V ++S+++ +PR
Sbjct: 638 LDLAYGVQLLSQYMQDPR 655
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 319 bits (818), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 256/902 (28%), Positives = 395/902 (43%), Gaps = 124/902 (13%)
Query: 289 WIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSVGCTLTLKNV 348
W++DSGA+ H +F ++ + + N ++ V G + S L +V
Sbjct: 387 WLIDSGANEHICCDITFFSSFYRIKPVNVSLPNGTIVLVHYAGTV----SFNSKFYLNHV 442
Query: 349 RHIPDLRLNLLSVSVLDKE--GYHHHTGGGNWKLTKGSL-VVARGKLCCSLYKTH----- 400
+ P+ LNL+SV+ L + + H + + SL ++ K LYK +
Sbjct: 443 LYSPNFLLNLISVAKLCESLTCFFHFSLDKCLIQDQQSLKMIGLAKQMDGLYKFYPSSSS 502
Query: 401 -------------TIICAGQLNTVADDA-SPNLWHRRLAHVSERGLNMLAKKSLIPLAKG 446
++ N + S LWH RL H+S++ L L+ L P K
Sbjct: 503 CNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQRLQTLSL--LYPSIKI 560
Query: 447 KTNP-CDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFS 505
CD C F K + F +D S
Sbjct: 561 DNKAICDLCHFAKHKHLPFTS-----------------------------------NDHS 585
Query: 506 RKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRH 565
R WI LL+TK +V H + F M++ K +RTDNG E++ S HGI H
Sbjct: 586 RFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFMLSTLY---SSHGIIH 642
Query: 566 EKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDF 625
+K+ TPQ NG ER ++ I+ R++L + LP +W A+ AV+LIN +P+ L+
Sbjct: 643 QKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLINRVPTPTLNN 702
Query: 626 DIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDP 685
P V + S +VFG + + KL ++ F+ Y G+ L+D
Sbjct: 703 QSPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQSGYKGFTLYDL 762
Query: 686 XXXXXXXXXXXXFHENEIVVDTTCEESTSDGVIDITPGSIPTDDATGGGMPESEREEXEP 745
FHEN + T ++ D PT A P P
Sbjct: 763 HSREIFISRHVTFHENFLPYPHTSSSTSPDW--QYFSYFHPTPVAPNLPSP--------P 812
Query: 746 VIGDEETIVDDNSDTEGVELGEPENPITPXGVEPQLRRSTRECQPSARYR---------- 795
+I D I D+ + P PI P R STR + +
Sbjct: 813 IIDD--IIAPDHPSPDPTPPTSPILPIVP-------RHSTRNVTAPSYLQDYICNNIHAF 863
Query: 796 ---------------SSDYILISDEGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTY 840
S + ++S +PE ++ K DCW+ AMQ E+ +L+K T+
Sbjct: 864 TYPITHSLSHHHLSNSRSFFVMSLHTQPEPKSYAEASK-LDCWKHAMQVELQALEKTGTW 922
Query: 841 EPVKLPKGKRTLKNKWVYKLK-KDDGNLVRYKARLVVKGFTQKKGIDFDEIFSPVVKMSS 899
+ V LP + + +W+YK+K DG + RYKARLV KG+ Q +G+D+ + +SPV K+++
Sbjct: 923 KLVDLPPNVKPIGCRWIYKVKFHADGTVERYKARLVAKGYNQIEGLDYLDTYSPVAKLTT 982
Query: 900 IRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGKEDMVCRLKKSLYGL 959
+R+V+ L + N L QLDV AFLHGDL+E++YM P G K K + VC+L KSLYGL
Sbjct: 983 VRLVIALSSINNWHLHQLDVNNAFLHGDLQEDVYMMVPPGIK-SSKLNQVCKLTKSLYGL 1041
Query: 960 KQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYVDDMLIVGPDAHMIS 1019
KQA R+WY+ S + +Q Y + +D ++V+K S F +LL+YVDD+++ G S
Sbjct: 1042 KQASRKWYEKLTSVLFDQHYTQATSDYSLFVKKTSTS-FTVLLVYVDDIILAGNSISEFS 1100
Query: 1020 KLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIERVLERFNMKNAKSVST 1079
+KS L F +KDLG + L +E+ + L Q KY +L +K +ST
Sbjct: 1101 HIKSILDSLFKIKDLGQLKYFLGIEVAHSKLGIS--LCQRKYCLDLLADIGSLGSKPIST 1158
Query: 1080 PLAAHFKLSKKSYPSTEKEKGDMSNVPYSSAIRSLMYAMVCTKPAIAHAVGVVSRFLSNP 1139
P + KL S +VP + + + T+P I +S+FLS P
Sbjct: 1159 PSDSSIKLHLDS-------SSPFEDVPACRRLVGRLLYLNNTRPDITFITQQLSQFLSQP 1211
Query: 1140 RR 1141
+
Sbjct: 1212 TQ 1213
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 223/689 (32%), Positives = 333/689 (48%), Gaps = 82/689 (11%)
Query: 485 PMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTD 544
PM+V L +D+ S KT I + ++K+ A + K +R D
Sbjct: 417 PMQV---------LYLMDNLSLKT-IGFAKQMKGLYKYIPP--AATSALFQITSKTIRID 464
Query: 545 NGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFW 604
NG E++ +D+ + HGI H K+ TPQ NG ER ++ I+ VR++L + LP FW
Sbjct: 465 NGPEFM---LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSKLPPTFW 521
Query: 605 GEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDK 664
AV AV+LIN + + L P V + S +VFG + + R KL +
Sbjct: 522 SYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHRTKLQSR 581
Query: 665 SIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHENEIVVDTTCEESTSDGVIDITPGS 724
+ F+ Y GY L+D FHE + +T+D + P S
Sbjct: 582 ARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHETILPYHKNPSSTTADW--NYYPSS 639
Query: 725 IPTDDATGGGMPESEREEXEPVIGDE---ETIVDDNSDTEGVELGEPENPITPXGVEPQL 781
+S + P + + ++DD + V P P V P
Sbjct: 640 ------------QSYSHDQSPNVNHQVHIPAVIDDILPSTHVLPPSPPYDSPPIHVSP-- 685
Query: 782 RRSTR-ECQP------------SARYRSSDYI------------LISDEGEPESFQDVQS 816
RRS R P S Y S YI + S + PE V++
Sbjct: 686 RRSNRVRTAPLHLQDYVCNSVHSTTYPLSHYINYNNISTNHASFISSLQTTPEPTTYVEA 745
Query: 817 CKDRDCWRKAMQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD-DGNLVRYKARLV 875
K DCW KAMQ E+ +L+K T++ V LP + + +W+YK+K + DG++ RYKARLV
Sbjct: 746 SK-HDCWNKAMQAELLALEKTGTWDIVDLPAYVKPIGCRWIYKVKHNADGSIERYKARLV 804
Query: 876 VKGFTQKKGIDFDEIFSPVVKMSSIRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYME 935
KG+TQ +G+D+ E +SPV K++++R+V+ L + N L QLDV AFLHG+L+E++YM
Sbjct: 805 AKGYTQIEGLDYFETYSPVAKLTTVRLVIALASIHNWHLHQLDVNNAFLHGELQEDVYMI 864
Query: 936 QPEGFKVKGKEDMVCRLKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSD 995
P G + K VC+LKKSLYGLKQA RQWY+ S ++ Q Y + +D ++++K SD
Sbjct: 865 LPPGINI-AKPHQVCKLKKSLYGLKQASRQWYEKLTSVLIQQHYIQASSDHSLFIKKSSD 923
Query: 996 GKFIILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLW 1055
F ILL+YVDD+++ G +KS L +F +KDLG + L +E+ + L+
Sbjct: 924 S-FTILLVYVDDIILAGTSLLEFQNIKSILDTSFKIKDLGQLKYFLGIEVAHSKLGISLY 982
Query: 1056 LSQEKYIERVLERFNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMS----NVP-YSSA 1110
Q KY +L +K +STP S PST K D S ++P Y
Sbjct: 983 --QRKYCLDLLHDSGHIGSKPISTP----------SDPST-KLHHDTSTPYDDIPAYRRL 1029
Query: 1111 IRSLMYAMVCTKPAIAHAVGVVSRFLSNP 1139
+ L+Y + T+P I +S+FLSNP
Sbjct: 1030 VGRLLY-LNNTRPDITFITQQLSQFLSNP 1057
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 267/556 (48%), Gaps = 60/556 (10%)
Query: 419 LWHRRLAHVSERGLNMLAKKSLIPLAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLELV 478
LWH RL H+S + L+ +++ + K CD C F + ++ F SS ++K +L+
Sbjct: 511 LWHFRLGHLSNQRLSTMSRLYPSIIVDNKA-ACDICHFARHKKLPFPHSSSHANSKFQLL 569
Query: 479 HSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVAL 538
H D+ GP+ + + G +YFLT +DD +R WI LL++K +V H + F A++E + +
Sbjct: 570 HFDIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITP 629
Query: 539 KCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMAN 598
K +RTDNG E++ D+ + GI H+++ TPQ NG ER ++ I+ R++L +
Sbjct: 630 KIIRTDNGSEFL---LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSK 686
Query: 599 LPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQR 658
LP FW A AV+LIN +P+ L P ++ + + +VFG + + R
Sbjct: 687 LPLSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHR 746
Query: 659 LKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHENEIVVDTTCEESTSDGVI 718
KL+ ++ F+ Y G L+D FHE + + + D
Sbjct: 747 TKLETRARKSVFLGYKSGFKGSVLYDLHTREIFISRHVVFHECVLPYKSNSSPQSHDWEY 806
Query: 719 DITPGSIPTDDATGGGM-PESEREEXEPVIGDEETIVDDNSDTEGVELGEPENPITPXGV 777
T S P D +G P S + P T D +
Sbjct: 807 -FTSFSTPLDLPSGTDTSPHSAITDIVPYTSPTPTSTSSIID-----------------I 848
Query: 778 EPQL--RRSTRECQPSARYRS------------------------------SDYIL-ISD 804
P L R S+R P + + S +IL +
Sbjct: 849 PPPLPTRHSSRNKTPPSYLKDFICANKSSASVNSLHSISNFVSYHNISNSHSHFILSLHA 908
Query: 805 EGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD- 863
EP+S+ + +CWR+AMQ E+ +L+ T++ + LP + + +W+YK+K
Sbjct: 909 HTEPKSYTEA---NKFECWRQAMQVELTALENTGTWKIIDLPSNAKPIGCRWIYKVKHHA 965
Query: 864 DGNLVRYKARLVVKGFTQKKGIDFDEIFSPVVKMSSIRVVLGLVANLNLELEQLDVKTAF 923
DG + RYKARLV KG+ Q +G+D+ + +SPV K ++IR+VL L + N L QLDV AF
Sbjct: 966 DGTIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRLVLALASLNNWHLHQLDVNNAF 1025
Query: 924 LHGDLEEEIYMEQPEG 939
LHGDL+E++YM+ P G
Sbjct: 1026 LHGDLQEDVYMDIPPG 1041
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 176/303 (58%), Gaps = 14/303 (4%)
Query: 827 MQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD-DGNLVRYKARLVVKGFTQKKGI 885
MQ E+ +L++ T++ V LP + + +W++K+K + DG++ RYKARLV KG+ Q +G+
Sbjct: 1 MQSEITALEQTGTWKIVDLPPAVKPIGCRWIFKIKHNVDGSIERYKARLVAKGYNQIEGL 60
Query: 886 DFDEIFSPVVKMSSIRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGK 945
D+ + +SPV K++++R ++ L + + L Q DV AFLHG+L+E++YM P G
Sbjct: 61 DYFDTYSPVAKLTTVRFIIALASINHWHLHQFDVNNAFLHGELQEDVYMIIPPGVP-HSH 119
Query: 946 EDMVCRLKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYV 1005
+D VC+L KSLYGL+QA +WY+ + +++ GYK+ +D +++ K + F ILL+YV
Sbjct: 120 QDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQAASDASLFI-KHTHSSFTILLVYV 178
Query: 1006 DDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIERV 1065
DD+++ G + +K L AF +KD+G + L +E+ + L Q KY +
Sbjct: 179 DDVILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSKSGIS--LCQRKYCLDL 236
Query: 1066 LERFNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVP-YSSAIRSLMYAMVCTKPA 1124
LE + +K ++TP KL S PS ++P Y I L+Y + T+P
Sbjct: 237 LEDSGLTGSKPMNTPSDPSIKLHNDSAPS-------FPDIPAYRRLIGRLLY-LNTTRPD 288
Query: 1125 IAH 1127
I +
Sbjct: 289 ITY 291
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 173/635 (27%), Positives = 269/635 (42%), Gaps = 106/635 (16%)
Query: 147 LLGSLPDSWDTL--VVSLSNSAP--NGVVTMSMVKXXXXXXXXXXXDVASTSSQALVTEN 202
L L DS+D + + L N P N + +M M D ++ +
Sbjct: 204 FLTGLNDSFDLVRSQILLMNPLPTINKIFSMVMQHERQFKISIPVED------STILVNS 257
Query: 203 RGRSKSRGPRHVKSGGRSKSREMRKCYHCGKEGHLKRNC-------------RLFKQDNA 249
G+S+ RG + G S S R C CG++GH C K +N+
Sbjct: 258 AGKSQGRG----RGNGNSNSNGKRSCSFCGRDGHTIDICYRKHGFPPNYGNKNFAKVNNS 313
Query: 250 DRRQENDR-------------NTSATVSGVDGE-----VTLV------------THDADY 279
Q +R NT + G+ E VTL+ +H ++
Sbjct: 314 SIEQNEEREDLDDSKSCKGNSNTEPSF-GITKEQYEQLVTLLQSQQASSSKVNLSHVTNH 372
Query: 280 CHVGDANTE----------WIVDSGASYHCVPKREYFFTYKAGDFGTIKM--GNNSVSQV 327
G T WIVDSGAS H ++F +Y IK+ GN ++++
Sbjct: 373 VTSGITRTSYTMNHSSFGTWIVDSGASDHICSSIKFFDSYAPIIPVHIKLPNGNMAIAKF 432
Query: 328 VGIGDICIKTSVGCTLTLKNVRHIPDLRLNLLSVSVL------------------DKEGY 369
G + S G L +NV ++ + +LNLLSV L DK
Sbjct: 433 SGT----VNFSPG--LIARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNL 486
Query: 370 HHHTGGGNWKLTKGSLVVARGKLCCSLYKTHTIICAGQLNTVADDASPN--LWHRRLAHV 427
TG G +L +G + G S + +I Q ++ + P LWH RL H+
Sbjct: 487 KM-TGLG--ELIEGLYFLNLGSQVFSQFNHQPVIALSQ-SSSSTTFLPQEALWHFRLGHL 542
Query: 428 SERGLNMLAKKSLIPLAKGKTNP-CDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPM 486
S L L + P K +N CD C + + ++ F S + + EL+H D+ GP+
Sbjct: 543 SNDRL--LRMQQHFPCIKVDSNSVCDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPI 600
Query: 487 EVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNG 546
S+ G +YF+T +DD+SR TWI L +TK +V K Q F +E + +K +RTDNG
Sbjct: 601 STHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNG 660
Query: 547 GEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGE 606
E++ D+ S GI H+ + TPQ NG ER ++ I+ R++L + LPK FW
Sbjct: 661 PEFL---MPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSY 717
Query: 607 AVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSI 666
+V A+Y+IN +P+ L P + G + ++ +VFG ++ R K D ++
Sbjct: 718 SVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQ 777
Query: 667 PCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHEN 701
C F+ Y G L+D +HE+
Sbjct: 778 KCVFLGYKQGIKGAILYDLNHKTIFASRNVTYHEH 812
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 271/613 (44%), Gaps = 85/613 (13%)
Query: 147 LLGSLPDSWDTL--VVSLSNSAP--NGVVTMSMVKXXXXXXXXXXXDVASTSSQALVTEN 202
L L DS+D + + L N P N + +M M D ++ +
Sbjct: 157 FLTGLNDSFDLVRSQILLMNPLPTINKIFSMVMQHERQFKISIPVDD------STILVNS 210
Query: 203 RGRSKSRGPRHVKSGGRSKSREMRKCYHCGKEGHLKRNC-RLFKQDNADRRQENDRNTSA 261
G+S+ RG + G S S R C CG++GH C R ++++ D + N++
Sbjct: 211 AGKSQGRG----RGNGNSNSNGKRSCSFCGRDGHTIDICYRKHEREDLDDSKSCKGNSNT 266
Query: 262 TVS-GVDGE-----VTLV------THDADYCHVGDANTE----------------WIVDS 293
S G+ E VTL+ + + HV + T WIVDS
Sbjct: 267 EPSFGITKEQYEQLVTLLQSQQASSSKVNLSHVTNHVTSGITRISYTMNHSSFGTWIVDS 326
Query: 294 GASYHCVPKREYFFTYKAGDFGTIKM--GNNSVSQVVGIGDICIKTSVGCTLTLKNVRHI 351
GAS H + F +Y IK+ GN ++++ G + S G L +NV ++
Sbjct: 327 GASDHICSSIKNFDSYAPIIPVHIKLPNGNMAIAKFSGT----VTFSPG--LIARNVLYV 380
Query: 352 PDLRLNLLSVSVL------------------DKEGYHHHTGGGNWKLTKGSLVVARGKLC 393
+ +LNLLSV L DK TG G +L +G + G
Sbjct: 381 AEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNL-KMTGLG--ELIEGLYFLNLGSQV 437
Query: 394 CSLYKTHTIICAGQLNT----VADDASPNLWHRRLAHVSERGLNMLAKKSLIPLAKGKTN 449
S + +I + Q ++ + +A LWH RL H+S L L + P K +N
Sbjct: 438 FSQFNHQPVIASSQASSSTTFLPQEA---LWHFRLGHLSNDRL--LRMQQHFPCIKVDSN 492
Query: 450 P-CDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKT 508
CD C + + ++ F S + + EL+H D+ GP+ S+ G +YF+T +DD+SR T
Sbjct: 493 SVCDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFT 552
Query: 509 WIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKT 568
WI L +TK +V K Q F +E + +K +RTDNG E++ D+ S GI H+ +
Sbjct: 553 WIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFL---MPDFYSSKGIEHQTS 609
Query: 569 VPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIP 628
TPQ NG ER ++ I+ R++L + LPK FW +V A+Y+IN +P+ L P
Sbjct: 610 CVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAIYIINRIPTPLLQNKSP 669
Query: 629 EKVWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXX 688
+ G + ++ +VFG ++ R K D ++ C F+ Y G L+D
Sbjct: 670 YFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHK 729
Query: 689 XXXXXXXXXFHEN 701
+HE+
Sbjct: 730 TIFASRNVTYHEH 742
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 199/406 (49%), Gaps = 32/406 (7%)
Query: 289 WIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSVGCTLTLKNV 348
WIVD+GA++H +F +Y + + + N SV + IG + + L++ NV
Sbjct: 398 WIVDTGATHHTCYDLNWFTSYSKIETINVNLPNGSVIEACYIGQVKLSKD----LSIDNV 453
Query: 349 RHIPDLRLNLLSVSVLDKEG-----YHHHTGGGNWKLTKGSLVVARGKLCCSLYKTHT-- 401
++P +NL+SVS L +E + K T + +A+ K LY T
Sbjct: 454 LYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKEKH--GLYYLETDE 511
Query: 402 --------IICAGQLNT--VADDASPNLWHRRLAHVS-ERGLNMLAKKSLIPLAKGKTNP 450
I +L+ V D LWH RL H+S +R + M S +P++
Sbjct: 512 RNKVSVSNISAQVELHQKHVPDGV---LWHLRLGHLSHDRMICMNKMYSYVPVSPHTA-- 566
Query: 451 CDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWI 510
CD C +Q + F SSR +LVH D+ GP S+ G +YFLT +DD +R WI
Sbjct: 567 CDVCQMCRQKILPFPISSRNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTILDDCTRHVWI 626
Query: 511 YLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVP 570
+L+ K + + F +MVER+ +K +R+DNG E++ +EF D + GI H+++
Sbjct: 627 VMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFMLREFYD---KKGIIHQRSCV 683
Query: 571 GTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEK 630
TPQ NG ER ++ I+ R+++ + LPK FW AV AVYLIN +P+ L+ +
Sbjct: 684 YTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILNNKSSYE 743
Query: 631 VWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDE 676
V S L+VFG ++ R K D K+ C F+ + E
Sbjct: 744 VLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGFKSE 789
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 249/605 (41%), Gaps = 66/605 (10%)
Query: 280 CHVGDANTEWIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSV 339
C + + W +DSGA+ H V +F ++ + + + N S V G I
Sbjct: 370 CSINSKSDVWFLDSGANEHIVNNTHWFTSFHKINPRPVNLPNGSSVLVEYAGTIRFTPQ- 428
Query: 340 GCTLTLKNVRHIPDLRLNLLSV----SVLDKEGYHHHTGGGNWKLTKGSLVVARGKLCCS 395
L+NV + P LNL+S+ S L+ H+ C
Sbjct: 429 ---FYLENVLYSPSFTLNLISIFKVCSSLNCYAIFHNKQ-------------------CL 466
Query: 396 LYKTHT--IICAGQLNTVADDASPNLWHRRLAHVSERGLNMLAKKSLIP-LAKGKTNPCD 452
L H+ +I G+ V S LWH RL HVS + L +++ L P L CD
Sbjct: 467 LQDLHSQKMIGLGEQFGVYYSYSA-LWHFRLGHVSPKRLIHMSQ--LYPTLTVDVHATCD 523
Query: 453 YCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYL 512
C F KQ ++ F S K EL+H D+ GP+ + S+ RYFLT +DD+SR WI L
Sbjct: 524 ICHFAKQKKLPFSNSISVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVL 583
Query: 513 LRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGT 572
L++K +V +H + F +++ + + K +R+DNG E++ F Y S+ GI H ++ T
Sbjct: 584 LKSKSEVSQHVKNFINLIQTQYNITPKTVRSDNGPEFLLHSF--YASK-GIVHHRSCVET 640
Query: 573 PQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVW 632
PQ NG ER ++ I+ R++L + LP +W A+ A ++IN + S L P ++
Sbjct: 641 PQQNGRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKSPYQLL 700
Query: 633 TGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXX 692
+ +VFG + R KL ++ F+ Y GY L D
Sbjct: 701 HDTIPAEHIFKVFGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGYVLLDIHTREIHI 760
Query: 693 XXXXXFHEN---------------EIVVDTTCEESTSDGVIDIT-PGSIPTDDATGGGMP 736
F+E+ E TC S + IT P S P +P
Sbjct: 761 SRHVQFYEHILPYPATSSSITTAWEYFSSDTCSSSNPNSDTPITLPSSPP--PFIDVDIP 818
Query: 737 ESEREEXEPVIGDEETIVDDNSDTEGVELGEPENPITPXGVEPQLRRSTRECQPSARYRS 796
++ E I + S ++ + L ++ P + Y S
Sbjct: 819 PTDHEHPISSIPSPSPPIIRKSIRNTHPPTHLQDYVCNTSTASVLSDNSFVHHPISHYYS 878
Query: 797 SDYILIS---------DEGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTYEPVKLPK 847
+ + S EP ++ + DCW +AM+ E+++L+ T+ V LP
Sbjct: 879 YNNLSSSHCAFAMSLDSHTEPTTYAEA---SKFDCWNQAMKVELSALENTGTWRLVDLPP 935
Query: 848 GKRTL 852
+ +
Sbjct: 936 NVKPI 940
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 160 bits (404), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 184/411 (44%), Gaps = 51/411 (12%)
Query: 280 CHVGDANTEWIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSV 339
C + + W++DSGA+ H F +Y + + N S V G +
Sbjct: 380 CSLHVPSDHWLIDSGANEHICSSLHLFHSYYRIKPICVNLPNGSSVIVQYAGTVVFSPHF 439
Query: 340 GCTLTLKNVRHIPDLRLNLLSVS-VLDKEGYHHHTGGGNWKL--TKGSLVVARGKLCCSL 396
T +V + P ++ L+SVS + YH H + + K ++ G LC L
Sbjct: 440 HIT----HVLYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIGLGNLCDGL 495
Query: 397 YKTHTIICAG-QLNTVADDASPN---------------------LWHRRLAHVSERGLNM 434
Y+ H A Q + ++ SP +WH RL H+S + L+M
Sbjct: 496 YRLHPFAPASPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRLGHLSNQRLSM 555
Query: 435 LAKKSLIPLAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGS 494
+ SL Y ++ + SS K EL+H D+ GP+ V S+ G
Sbjct: 556 M--HSL------------YSSITIDNKAYSIASS-----KFELLHFDIWGPLSVTSVHGH 596
Query: 495 RYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEF 554
+YFLT +DDFSR W+ LL+ K +V H + F ++ + K +R+DNG E++ EF
Sbjct: 597 KYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEFLIPEF 656
Query: 555 RDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYL 614
Y S+ GI H+K+ TPQ NG ER ++ I+ R++L + LP FW AV AV+L
Sbjct: 657 --YASK-GIIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVIHAVFL 713
Query: 615 INXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKS 665
IN +P+ P ++ + +VFG F QR KL ++
Sbjct: 714 INKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSRA 764
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 419 LWHRRLAHVSERGLNMLAKKSLIPLAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLELV 478
LWH RL H+S + L+ +++ + K CD C F + ++ F SS ++K +L+
Sbjct: 511 LWHFRLGHLSNQRLSTMSRLYPSIIVDNKA-ACDICHFARHKKLPFPHSSSHANSKFQLL 569
Query: 479 HSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVAL 538
H D+ GP+ + + G +YFLT +DD +R WI LL++K +V H + F A++E + +
Sbjct: 570 HFDIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITP 629
Query: 539 KCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMAN 598
K +RTDNG E++ D+ + GI H+++ TPQ NG ER ++ I+ R++L +
Sbjct: 630 KIIRTDNGSEFL---LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSK 686
Query: 599 LPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQR 658
LP FW A AV+LIN +P+ L P ++ + + +VFG + + R
Sbjct: 687 LPLSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHR 746
Query: 659 LKLDDKSIPCTFVCYGDEEF 678
KL+ ++ F+ Y + F
Sbjct: 747 TKLETRARKSVFLGYKNFYF 766
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 41/350 (11%)
Query: 285 ANTEWIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSVGCTLT 344
+N+ W+VDSGA+ H F +Y A + + + S+ V G I +
Sbjct: 358 SNSYWLVDSGANEHICRDLNLFTSYHAISPSIVTLPDGSIVTVTHAGYI----NFSPQFY 413
Query: 345 LKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLTKGSLVVARGKLCCSLYKTHTII- 403
L NV + RLNL+SV K+C SL T +
Sbjct: 414 LTNVLYSSSFRLNLMSV----------------------------HKVCESLSCTFQFLP 445
Query: 404 --CAGQLNT---VADDASPNLWHRRLAHVSERGLNMLAKKSLIPLAKGKTNPCDYCLFGK 458
C Q +T + A+ +L H+S + +NM++ ++ K + CD C F K
Sbjct: 446 NQCIIQDSTSLKMIGLANQQDGLYKLGHLSHQRMNMMSSLYSNIVSDNKNSVCDICHFAK 505
Query: 459 QHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQ 518
Q + F S+ + EL+H D+ GP+ + S+ G +YFLT +DD SR WI L+TK
Sbjct: 506 QKHLPFSISTSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTKSG 565
Query: 519 VFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGV 578
V H + F MV+ + V KC+R+DNG E++ F + GI H+K+ TPQ NG
Sbjct: 566 VSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFLILSFYESL---GILHQKSCVETPQQNGR 622
Query: 579 AERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIP 628
ER + I+ R++L + LP +W A+ AV+LIN P+ L+ P
Sbjct: 623 VERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSP 672
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 232/553 (41%), Gaps = 147/553 (26%)
Query: 590 VRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKA 649
VRSMLK +P FWG AVNTA Y++N P+ + +PE++W+ R S S+L+VFG
Sbjct: 2 VRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIF 61
Query: 650 FMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHENEIVVDTTC 709
+ HVP +R KL+DK+ V Y + YRL D E E +
Sbjct: 62 YKHVPDSRRKKLEDKTEAMILVGYHNTG-AYRLLDLHSKKISITRDVKVLEEEYWDWNSN 120
Query: 710 EESTSDGVIDITPGSIPTDDATGGGMPESEREEXEPVIGDEETIVDDNSDTEGVELGEPE 769
E S + + I ++E + ++ +EE I ++ S E + P+
Sbjct: 121 ECSVYEKNVII-----------------ENKKESDELLTNEEVISEEVSYEEPTTIARPQ 163
Query: 770 NPITPXGVEPQLRRSTRECQPSARYRSSDYILISDEGEPESFQDVQSCKDRDCWRKAMQE 829
Q+ R ++CQ + I +GE F + K
Sbjct: 164 R-------NKQMLRRLQDCQVTGDDE------IGSDGELVHFAMLVDTKPL--------Y 202
Query: 830 EMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD-DGNLVRYKARLVVKGFTQKKGIDFD 888
++ S KN T+E +KL GK+ + KWV+KLK + +G +V++KARLV
Sbjct: 203 KLKSSGKNQTWELIKLTDGKKAIDVKWVFKLKLNPEGKIVKHKARLVA------------ 250
Query: 889 EIFSPVVKMSSIRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGKEDM 948
RV L + EGF ++
Sbjct: 251 ------------RVFL-------------------------------KKEGFDY---TEV 264
Query: 949 VCRLKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYVDDM 1008
V +L K+LYGLKQAPR W K + F V QG+K+ A+ VYV+
Sbjct: 265 VFKLNKALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVK----------------- 307
Query: 1009 LIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIERVLER 1068
G + G++ I+ +EI+R K L L+Q KY + ++
Sbjct: 308 ---GSE--------------------GTSLLIICLEILRTTKG--LILNQTKYDTEIQKK 342
Query: 1069 FNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVPYSSAIRSLMYAMVCTKPAIAHA 1128
FNM + S S LA +++ E++KG + + L+ + ++ I+++
Sbjct: 343 FNMLDFNS-SITLAYANNINE----VKEEDKGVDPTI--LRRLIGLLRYLCQSRLDISYS 395
Query: 1129 VGVVSRFLSNPRR 1141
VG+VS+F+SNP +
Sbjct: 396 VGIVSKFMSNPLK 408
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 3/250 (1%)
Query: 451 CDYCLFGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWI 510
CD C F + ++ F SS +K +L+H D+ GP+ + S+ G +YFLT +DD +R WI
Sbjct: 16 CDVCHFARHKKLPFSHSSSHASSKFQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWI 75
Query: 511 YLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVP 570
LL+TK +V H + F M+E + V K +RTDNG E++ EF Y S+ GI H+ +
Sbjct: 76 ILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFLLHEF--YASK-GILHQSSCV 132
Query: 571 GTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEK 630
TPQ NG ER ++ I+ R++L + LP FW A AV+LIN + + L P
Sbjct: 133 ETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYH 192
Query: 631 VWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXX 690
+ + +VFG + + KL+ ++ F+ Y GY L+D
Sbjct: 193 LLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREI 252
Query: 691 XXXXXXXFHE 700
FHE
Sbjct: 253 FISRHVVFHE 262
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 797 SDYIL-ISDEGEPESFQDVQSCKDRDCWRKAMQEEMNSLKKNDTYEPVKLPKGKRTLKNK 855
S +IL + EP+++ + +CWR+AMQ E+ +L+ T++ + P + + +
Sbjct: 373 SHFILSLHAHNEPKTYTEAN---KFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCR 429
Query: 856 WVYKLKKD-DGNLVRYKARLVVKGFTQ 881
W+YK+K DG + RYKARLV KG+ Q
Sbjct: 430 WIYKIKHHADGTIERYKARLVAKGYNQ 456
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 18/389 (4%)
Query: 529 MVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIE 588
M+E + V K +RTDNG E++ EF Y S+ GI H+++ TPQ NG ER ++ I+
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFLLHEF--YASK-GILHQRSCVETPQQNGRVERKHQHILN 57
Query: 589 RVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFK 648
R++L + LP FW A AV+LIN +P+ L P + + +VFG
Sbjct: 58 IGRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCL 117
Query: 649 AFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHENEIVVDTT 708
+ + R KL+ ++ F+ Y GY L+D FHE + +
Sbjct: 118 CYASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHECVLPYKSI 177
Query: 709 CEESTSDG--VIDITPGSIPTDDATGGGMPESEREEXEPVIGDEETIVDDNSDTEGVELG 766
+ D I+ I + P + + T +D S +
Sbjct: 178 SSSQSLDWEYFTSISSLLIIPSVSDISHSPSTTKYVPHTQPTTTTTPTNDPSRPPPIRCS 237
Query: 767 EPENPITPXGVEPQLRRSTRECQPSARYRSSDYILISDEGEPESF-----------QDVQ 815
N I+P ++ + + Y S+Y+ + P S +
Sbjct: 238 S-RNKISPSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPHSHFILSLHAHNEPKTYT 296
Query: 816 SCKDRDCWRKAMQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD-DGNLVRYKARL 874
+CWR+AMQ E+ +L+ T++ + P + + +W+YK+K + D + RYKARL
Sbjct: 297 EANKFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYKIKHNADDTIERYKARL 356
Query: 875 VVKGFTQKKGIDFDEIFSPVVKMSSIRVV 903
V KG+ Q +G+D+ + +SPV K ++IR+
Sbjct: 357 VAKGYNQVEGLDYFDTYSPVAKHTTIRLA 385
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 959 LKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYVDDMLIVGPDAHMI 1018
++ A R+WY+ S +VN GYK+ AD +++ K S +F LL+YVDD+++ G
Sbjct: 382 IRLASRKWYEKLASLLVNHGYKQASADHSLFI-KHSTTQFTALLVYVDDIILAGNSLDEF 440
Query: 1019 SKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEKYIERVLERFNMKNAKSVS 1078
+ +K+ L +F +KDLG + L +E+ + + L Q KY +L + ++K V+
Sbjct: 441 TFIKNILHNSFKIKDLGQLKYFLGLEVAHSK--LGISLCQRKYGLDLLSDTGLLDSKPVA 498
Query: 1079 TPLAAHFKLSKKSYPSTEKEKGDMSNVP-YSSAIRSLMYAMVCTKPAIAHAVGVVSRFLS 1137
TP KL P +++P Y + L+Y + T+P I +S+FLS
Sbjct: 499 TPSDPSIKLYHDDSPL-------YTDIPAYRRLVGRLLY-LNATRPDITFITQQLSQFLS 550
Query: 1138 NP 1139
P
Sbjct: 551 KP 552
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Query: 451 CDYCLFGKQHRVSFLKSSRRR-DNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTW 509
C+ CL GK R +F + R + L +VHSD+ GP++V + G+RYF+TF+D++S+ W
Sbjct: 15 CNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSKMLW 74
Query: 510 IYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTV 569
+YL++ K + F++F + E+++G+ LK L T GGEY SK+F YC+ GI HE T
Sbjct: 75 LYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIHEVTT 134
Query: 570 PGTP 573
P TP
Sbjct: 135 PYTP 138
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 482 VCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCL 541
+ GP+ V S+ G RYFLT +DD +R W+ LL+TK +V H + F M++ K +
Sbjct: 521 IWGPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFI 580
Query: 542 RTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLPK 601
RTDNG E++ F + HGI H+K+ TPQ NG ER ++ I+ R++L + LP
Sbjct: 581 RTDNGPEFMLPSFY---ASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPP 637
Query: 602 PFWGEAVNTAVYLINXLPSAPLDFDIP 628
FW A++ AV+LIN +P+ L P
Sbjct: 638 SFWSYAIHHAVFLINRVPTPLLHNQSP 664
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 130/298 (43%), Gaps = 41/298 (13%)
Query: 419 LWHRRLAHVSERGLNMLAKKSLIP-LAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLEL 477
LWH RL H+S + L+ + L P + CD C F KQ ++ + S+ + EL
Sbjct: 444 LWHFRLGHLSNQRLSQM--HHLYPDIHVDNKFICDICHFAKQRKLPYNSSTSIASSNFEL 501
Query: 478 VHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVA 537
++ D+ GP+ S+ G RYFLT +DD SR W L + K +V H Q F +++ + V
Sbjct: 502 LYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQNKHKVT 561
Query: 538 LKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMA 597
K +R+DNG ++ F Y SQ GI H+++ TPQHN
Sbjct: 562 PKIIRSDNGHVFLLSAF--YASQ-GIIHQRSCVETPQHN--------------------- 597
Query: 598 NLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQ 657
V+LIN +P+ L+ P +V + +VFG + +
Sbjct: 598 --------------VFLINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYASTLQSH 643
Query: 658 RLKLDDKSIPCTFVCYGDEEFGYRLWDPXXXXXXXXXXXXFHENEIVVDTTCEESTSD 715
R KL ++ F+ Y G L+D FHE+ + ++T +S+
Sbjct: 644 RTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMSRNVTFHESILPYNSTNTHFSSN 701
>IMGA|Medtr6g069750.1 Reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12976555-12977103 H
EGN_Mt090430 20090702
Length = 149
Score = 94.0 bits (232), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 29/142 (20%)
Query: 827 MQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKK-DDGNLVRYKARLVVKGFTQKKGI 885
MQ E+ +L+ T++ V LP + + +W+YK+K DG++ RYKARLVVKG+ Q +G
Sbjct: 1 MQAEITALENTGTWKLVDLPPNVKPIGCRWIYKIKHYADGSIQRYKARLVVKGYNQVEGW 60
Query: 886 DFDEIFSP----------------------------VVKMSSIRVVLGLVANLNLELEQL 917
D+ + +SP V KM+++R V+ L + + +L
Sbjct: 61 DYFDTYSPVAKLTTARLVVKGYNQVEGWDYFDTYSLVAKMTTVRTVIALASINQWHIHKL 120
Query: 918 DVKTAFLHGDLEEEIYMEQPEG 939
D +AFLHGDL+E++YM P+G
Sbjct: 121 DANSAFLHGDLQEDVYMLIPQG 142
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 569 VPGTPQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIP 628
V TPQHNGVAERMN+T++E+ R ML L + FW EAVNT YL+N P ++
Sbjct: 2 VRNTPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTL 61
Query: 629 EKVWTGRNISYSHLRVFGFKAFMHV 653
++W G+++ YS+LRVFG + HV
Sbjct: 62 YELWPGKSVDYSNLRVFGCTVYYHV 86
>IMGA|Medtr6g077130.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 15158354-15162093 E
EGN_Mt090430 20090702
Length = 532
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 13/295 (4%)
Query: 107 MNLKLSEGRSITQH--LNDFEGLVTELAVSGMSLEDEMQACLLLGSLPDSWDTLVVSLSN 164
MN+K + + Q +N++ L+ EL + L D A L+ LP SWD L +
Sbjct: 123 MNVKYTAEEATKQKFVINEYHQLIEELKAENIILPDVFVAAALVEKLPSSWDDYKQQLKH 182
Query: 165 S----APNGVVTMSMVKXXXXXXXXXXXDVASTSSQALVTEN---RGRSKSRGPRHVKSG 217
+ N ++ +++ A S L+ N + R +++ +K
Sbjct: 183 KHKQMSLNDLIRHIIIEDTSRKECGAARAKALESRANLIQNNARKQQRYENKSDHALKVT 242
Query: 218 GRSKSREMRKCYHCGKEGHLKRNCRLFKQDNADRRQENDRNTSATVSGVDGEVTLVTHDA 277
+ + +CY CGK+GH +CR K + + + N + + ++
Sbjct: 243 NPNFKANLGECYVCGKKGHKAYHCRYRKVNGQPPKPK--ANLTQGDDKKYDDDDVIAAVI 300
Query: 278 DYCHVGDANTEWIVDSGASYHCVPKREYFFTYKA--GDFGTIKMGNNSVSQVVGIGDICI 335
H+ + +W+VDSGA+ H KRE F +Y + D + +G++ + V G G + +
Sbjct: 301 SKVHLVNDVQKWVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVIL 360
Query: 336 KTSVGCTLTLKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLTKGSLVVARG 390
K + G TL L +V ++P +R NL+SV++L+K G ++K ++ V G
Sbjct: 361 KLTSGKTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNG 415
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 39/173 (22%)
Query: 513 LRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPGT 572
++ + K+F+Q +A++E + G +K L+ DNG E+ EF ++C GI V T
Sbjct: 1 MKHRSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNT 60
Query: 573 PQHNGVAERMNRTIIERVRSMLKMANLPKPFWGEAVNTAVYLINXLPSAPLDFDIPEKVW 632
PQ N VA+RMN+T++ER R ML A L + FWGE
Sbjct: 61 PQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGE-------------------------- 94
Query: 633 TGRNISYSHLRVFGFKAFMHVPKEQRLKLDDKSIPCTFVCYGDEEFGYRLWDP 685
TG FG + V + KL+ ++ FV YGD YR+W P
Sbjct: 95 TG----------FGCTVYYRVNEG---KLESRAKKRVFVGYGDGVKEYRIWSP 134
>IMGA|Medtr8g128700.1 Integrase, catalytic region
chr08_pseudomolecule_IMGAG_V3 30179122-30179823 H
EGN_Mt090430 20090702
Length = 193
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 346 KNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLT-----KGSLVVARGKLCCSLY--K 398
+++ + D + V VLD +H G W LT G++V+A +LY +
Sbjct: 21 EDIALVVDGHTHYTDVWVLDSGASYHICPRGEWFLTYEQLDGGNIVMAASVKRGTLYFLQ 80
Query: 399 THTIICAGQLNTVADDAS--PNLWHRRLAHVSERGLNMLAKKSLIPLAKGKT-NPCDYCL 455
T+ G + + D LWH RL H+SERG+ +LAK +L+ K K ++
Sbjct: 81 GTTLTDYGVVASFEIDQEDMTKLWHMRLGHMSERGMQILAKDNLLYGHKIKDPGLSEHYA 140
Query: 456 FGKQHRVSFLKSSRRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKT 508
FGK+HR FLK R L+ +H D P VESL G +YFL+ IDD+SR T
Sbjct: 141 FGKRHRNKFLKVIHRTKGTLDYIHDDCWEPSRVESLGGHKYFLSLIDDYSRMT 193
>IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr03_pseudomolecule_IMGAG_V3
12336621-12336989 H EGN_Mt090430 20090702
Length = 122
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 267 DGEVTLVT-HDADYCHVGDANTEWIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVS 325
D E+ LV HD + D+ + W++DSG S H + R+ F +Y +G+FG +K+ + V
Sbjct: 12 DNELLLVEEHD-----IVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEGVL 66
Query: 326 QVVGIGDICIKTSVGCTLTLKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLT 381
+ VG D+ ++ S G LTLK+ +H+ D++LNLLSV+ L EGY +WK++
Sbjct: 67 KCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr05_pseudomolecule_IMGAG_V3
30911334-30910966 H EGN_Mt090430 20090702
Length = 122
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 267 DGEVTLVT-HDADYCHVGDANTEWIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVS 325
D E+ LV HD + D+ + W++DSG S H + R+ F +Y +G+FG +K+ + V
Sbjct: 12 DNELLLVEEHD-----IVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEGVL 66
Query: 326 QVVGIGDICIKTSVGCTLTLKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLT 381
+ VG D+ ++ S G LTLK+ +H+ D++LNLLSV+ L EGY +WK++
Sbjct: 67 KCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33354025-33354392 H EGN_Mt090430 20090702
Length = 108
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 948 MVCRLKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKFSDGKFIILLLYVDD 1007
MV L+KSLYGLKQA R WY ++ G++ + AD ++ + F+ +L+YVDD
Sbjct: 1 MVYWLRKSLYGLKQASRNWYSKLSQALIEYGFQESHADHSLFTYS-RESIFMAVLIYVDD 59
Query: 1008 MLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIR 1047
++I G D I+ K L + F MKDLG + L +E+ R
Sbjct: 60 LVIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELAR 99
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 92/222 (41%), Gaps = 51/222 (22%)
Query: 918 DVKTAFLHGDLEEEIYMEQPEGFKVKGKEDMVCRLKKSLYGLKQAPRQWYKSFDSFMVNQ 977
D FLHGDL+E++YM P+G + VC+L KSLYGLKQA R+W++ S ++
Sbjct: 204 DANNTFLHGDLQEDVYMHPPQGVS-PPRPGQVCKLLKSLYGLKQASRRWFEKLISLLLTI 262
Query: 978 GYKRTDADPCVYVQKFSDGKFIILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSA 1037
G+ + AD ++ S F LL+YV AH
Sbjct: 263 GFVQASADHSFLIRA-SPTSFTALLIYV---------AH--------------------- 291
Query: 1038 RRILRMEIIRDRKSCKLWLSQEKYIERVLERFNMKNAKSVSTPLAAHFKLSKKSYPSTEK 1097
S + L Q KY +L + KSVSTPL L P +
Sbjct: 292 ------------SSKGISLCQRKYCLDLLSDAGLTTCKSVSTPLDYACLLHIDDGPPFDD 339
Query: 1098 EKGDMSNVPYSSAIRSLMYAMVCTKPAIAHAVGVVSRFLSNP 1139
Y I L+Y + T+P I+ A +S+F++ P
Sbjct: 340 VLA------YRCLIGCLLY-LTTTRPDISFATQQLSQFMAKP 374
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%)
Query: 493 GSRYFLTFIDDFSRKTWIYLLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISK 552
G+RYF+ FIDD+S TWIY+++ + ++ + + F M++ + +K R DN EY
Sbjct: 3 GARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRDS 62
Query: 553 EFRDYCSQHGIRHEKTVPGTPQHNGVAERMNRTIIERVRSMLKMANLP 600
+ + S+ G E + P T Q G AER +R I++ V +ML A+ P
Sbjct: 63 KLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 71.6 bits (174), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 992 KFSDGKFIILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKS 1051
K +D F ILL+YVDD+++ G +KS L +F +KDLG + +L +E+ ++
Sbjct: 4 KHTDSSFTILLVYVDDIILAGNSLSEFQHIKSILHSSFKIKDLGQLKYVLGLEVAHSKQG 63
Query: 1052 CKLWLSQEKYIERVLERFNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVP-YSSA 1110
+ L Q KY +L N+K VST A KL S P E ++P Y
Sbjct: 64 --ISLCQRKYCLDLLSDSGTINSKPVSTSSDASLKLHNDSSPPYE-------DIPSYRRL 114
Query: 1111 IRSLMYAMVCTKPAIAHAVGVVSRFLSNP 1139
I L+Y + T+P I +S+FLS P
Sbjct: 115 IGRLLY-LNSTRPDITFITQQLSQFLSKP 142
>IMGA|Medtr3g044280.1 hypothetical retrotransposon, related
chr03_pseudomolecule_IMGAG_V3 12337068-12337358 H
EGN_Mt090430 20090702
Length = 96
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 419 LWHRRLAHVSERGLNMLAKKSLIP-LAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLEL 477
LWH+RL H+ E+ + L K +++ ++ CD+C+ K+ +VSF S +R L+L
Sbjct: 10 LWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHSPKRPTILDL 69
Query: 478 VHSDVCGPMEVESLRGSRYFLTFIDD 503
VH + GPM+ ++ GS YFL+FIDD
Sbjct: 70 VHCHLFGPMKTGTIGGSTYFLSFIDD 95
>IMGA|Medtr5g082230.1 hypothetical retrotransposon, related
chr05_pseudomolecule_IMGAG_V3 30910887-30910597 H
EGN_Mt090430 20090702
Length = 96
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 419 LWHRRLAHVSERGLNMLAKKSLIP-LAKGKTNPCDYCLFGKQHRVSFLKSSRRRDNKLEL 477
LWH+RL H+ E+ + L K +++ ++ CD+C+ K+ +VSF S +R L+L
Sbjct: 10 LWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHSPKRPTILDL 69
Query: 478 VHSDVCGPMEVESLRGSRYFLTFIDD 503
VH + GPM+ ++ GS YFL+FIDD
Sbjct: 70 VHCHLFGPMKTGTIGGSTYFLSFIDD 95
>IMGA|Medtr4g104320.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 22711151-22711574 H
EGN_Mt090430 20090702
Length = 99
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 42/139 (30%)
Query: 827 MQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLKKD-DGNLVRYKARLVVKGFTQKKGI 885
M EE++S+KKN T E V L ++ + KWVYKLK + +G +V+
Sbjct: 1 MLEELSSIKKNKTLELVGLSTDEKAIGVKWVYKLKTNHEGKIVK---------------- 44
Query: 886 DFDEIFSPVVKMSSIRVVLGLVANLNLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGK 945
+ L D+K FL+G LEE ++++QP G ++K K
Sbjct: 45 -------------------------KVPLFHFDMKLYFLNGSLEETMFVKQPSGLEIKCK 79
Query: 946 EDMVCRLKKSLYGLKQAPR 964
E+ V +L K LYGLKQAPR
Sbjct: 80 EENVYKLHKDLYGLKQAPR 98
>IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
27872933-27871392 E EGN_Mt090430 20090702
Length = 256
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 19/123 (15%)
Query: 1001 LLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQEK 1060
+++YV DM++ G + ++ +L S L+ AF +KDLG+ + L +E ++ + + L ++Q K
Sbjct: 1 MIVYVGDMIVTGNNTPLLQQLVSHLNSAFSLKDLGALKYFLGIE-VKPQSNGSLLITQSK 59
Query: 1061 YIERVLERFNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVPYS------SAIRSL 1114
Y+ +L + +M+ AKS+ +P+ + KLSK + P+S S +R+L
Sbjct: 60 YVRDLLAKTDMQEAKSLPSPMISDLKLSKD------------GSTPFSDPTLCRSIVRAL 107
Query: 1115 MYA 1117
YA
Sbjct: 108 QYA 110
>IMGA|Medtr3g097830.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 23536803-23539544 H
EGN_Mt090430 20090702
Length = 150
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 310 KAGDFGTIKMGNNSVSQVVGIGDICIKTSVGCTLTLKNVRHIPDLRLNLL 359
+ G+F IK+GN V +VVG+GD+ +KTS+GC L LKNVRH+ D+ L L+
Sbjct: 101 RLGEFCMIKIGNKRVCEVVGMGDVWVKTSIGCKLQLKNVRHVLDIHLKLM 150
>IMGA|Medtr8g012170.1 polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 1857213-1857446 H
EGN_Mt090430 20090702
Length = 77
Score = 63.5 bits (153), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 934 MEQPEGFKVKGKEDMVCRLKKSLYGLKQAPRQWYKSFDSFMVNQGYKRTDADPCVYVQKF 993
M QP GF + VC+L+KSLYGLKQAP+ W+++ F++ ++ +D +++
Sbjct: 1 MSQPYGFVHPQHPNQVCKLRKSLYGLKQAPQAWFQALQKFLLGYNFQNAKSDTSLFIYVK 60
Query: 994 SDGKFIILLLYVDDM 1008
++ F L+YVDD+
Sbjct: 61 AN-TFAYFLVYVDDI 74
>IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 2876704-2878630 E
EGN_Mt090430 20090702
Length = 64
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 917 LDVKTAFLHGDLEEEIYMEQPEGFKVKGKEDMVCRLKKSLYGLKQAPRQWY 967
+DV AFLHGDL+E++YM+ P GF +VC+L+KS Y LK AP+ W+
Sbjct: 1 MDVHNAFLHGDLQEDVYMKLPRGFHTSSSR-LVCKLRKSQYVLKHAPQCWF 50
>IMGA|Medtr3g044010.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 12181817-12181315 H
EGN_Mt090430 20090702
Length = 133
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 29/123 (23%)
Query: 319 MGNNSVSQVVGIGDICIKTSVGCTLTLKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNW 378
M N+ VS+VVG+G I I+T G TL VR +P + N +S+S+LDK+G+
Sbjct: 1 MANSYVSKVVGMGSIKIRTHNGKFCTLNEVRPVPHMTKNQISLSLLDKKGFS-------- 52
Query: 379 KLTKGSLVVARGKLCCSLYKTHTIICAGQLNTVADDASPNLWHRRLAHVSERGLNMLAKK 438
+K+ ++ + +++ LWH RL H+SE G+ +LAK
Sbjct: 53 ------------------FKSEVVVASSEID---HKDMTRLWHMRLGHMSESGMQILAKD 91
Query: 439 SLI 441
+L+
Sbjct: 92 NLL 94
>IMGA|Medtr1g076760.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 15437706-15436255 H
EGN_Mt090430 20090702
Length = 186
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 328 VGIGDICIKTSVGCTLTLKNVRHIPDLRLNLLSVSVLDKEGYHHHTGGGNWKLTKGSLV 386
VG+G++ K S G LTLK+V ++PD+RLNLLSV+ L EGY +WKL+KGS++
Sbjct: 51 VGLGEVKWKMSNGTKLTLKDVNYVPDIRLNLLSVAKLRDEGYDRLFSQYSWKLSKGSMI 109
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 12/80 (15%)
Query: 605 GEAVNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQRLKLDDK 664
GEA++T V+++N PS L +++ +K+W +NISY HL VFG K ++ K
Sbjct: 110 GEALSTIVHVLNLSPSVSLQYEVRDKIWLRKNISYDHLCVFGCKTYV------------K 157
Query: 665 SIPCTFVCYGDEEFGYRLWD 684
S C F+CY + YR +D
Sbjct: 158 SQHCMFLCYDLDGADYRFYD 177
>IMGA|Medtr4g019480.1 Integrase, catalytic region
chr04_pseudomolecule_IMGAG_V3 3983257-3980975 H
EGN_Mt090430 20090702
Length = 102
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 462 VSFLKSS-RRRDNKLELVHSDVCGPMEVESLRGSRYFLTFIDDFSRKTWIYLLRTKDQVF 520
VSF +SS +R N L+LVHSD+C M+ +S+ G+ YF+TFIDD SRK +++++K QV
Sbjct: 32 VSFHESSPHKRPNLLDLVHSDICM-MDSKSIDGASYFVTFIDDHSRKVQTFVMKSKGQVP 90
Query: 521 KHFQQ 525
F Q
Sbjct: 91 CIFMQ 95
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 999 IILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRILRMEIIRDRKSCKLWLSQ 1058
+ +L+YVDD++I G D I+ K L + F MKDLG + L +E+ R L++ Q
Sbjct: 1 MAVLIYVDDLVIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARGANG--LFMCQ 58
Query: 1059 EKYIERVLERFNMKNAKSVSTPLAAHFKLSKKSYPSTEKEKGDMSNVP--YSSAIRSLMY 1116
KY +L+ M + K + P+ + KL +KG + P Y I L+Y
Sbjct: 59 RKYTLDILDECKMLDCKPSTFPMEQNQKLV--------LDKGPTCSDPSRYRRLISRLIY 110
Query: 1117 AMVCTKPAIAHAVGVVS 1133
+ P I ++V +++
Sbjct: 111 LTI-MHPEITYSVHILT 126
>IMGA|Medtr8g081950.1 lectin receptor kinase, related
chr08_pseudomolecule_IMGAG_V3 16974207-16974491 H
EGN_Mt090430 20090702
Length = 94
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 981 RTDADPCVYVQKFSDGKFIILLLYVDDMLIVGPDAHMISKLKSDLSKAFDMKDLGSARRI 1040
+ D++ +YV K IIL LYV+D LI + I++ K+DL K F+M DLG
Sbjct: 8 KCDSEHGMYVIKDKSKGVIILYLYVNDFLITCSNGSYINEFKNDLMKEFEMVDLGHISYF 67
Query: 1041 LRMEIIRDRKSCKLWLSQEKYIERVLERF 1069
LRME R ++ S+E Y +L+RF
Sbjct: 68 LRMEFQRTSRASN--SSKEIYASEILKRF 94
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 512 LLRTKDQVFKHFQQFHAMVERETGVALKCLRTDNGGEYISKEFRDYCSQHGIRHEKTVPG 571
L +TK +V K Q F +E + +K +RTDNG E++ D+ S GI H+ +
Sbjct: 2 LCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP---DFYSSKGIEHQTSCVE 58
Query: 572 TPQHNGVAERMNRTIIERVRSML 594
TPQ NG ER ++ I+ R+ML
Sbjct: 59 TPQQNGRVERKHQHILNVARAML 81
>IMGA|Medtr3g097840.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 23539798-23540964 E
EGN_Mt090430 20090702
Length = 54
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 608 VNTAVYLINXLPSAPLDFDIPEKVWTGRNISYSHLRVFGFKAFMHVPKEQR 658
+ TA+ LIN PS LD D+ +VW G+ Y +LRV G +AF+H+P Q+
Sbjct: 1 MKTAIDLINLTPSILLDGDVRNRVWIGKYACYGYLRVLGCRAFVHIPSPQK 51
>IMGA|Medtr5g089840.1 copia LTR rider, related
chr05_pseudomolecule_IMGAG_V3 34952559-34951978 H
EGN_Mt090430 20090702
Length = 154
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 80 PQVLWKKLENMYEATNAQGKVFMMHKVMNLKLSEGRSITQHLNDFEGLVTELAVSGMSLE 139
P+ LW+KLE +Y+A ++ + + NL++ EG I+ HL+ +V+EL + ++
Sbjct: 18 PKELWEKLEGLYQAKGISNRLLLKEQFHNLRMDEGTKISDHLSTLNNIVSELESIEVKID 77
Query: 140 DEMQACLLLGSLPDSW 155
DE + ++ SLP S+
Sbjct: 78 DEDKTLRIILSLPPSY 93
>IMGA|Medtr1g102740.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21153367-21155226 E
EGN_Mt090430 20090702
Length = 234
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 289 WIVDSGASYHCVPKREYFFTYKAGDFGTIKMGNNSVSQVVGIGDICIKTSVGCTLTLKNV 348
W+VDSG + H R F K + N + + GIG + I++ G L L NV
Sbjct: 13 WVVDSGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKLILNNV 72
Query: 349 RHIPDLRLNLLSVSVLDKEGYH 370
+IP+ +LLSV+ L +EGY
Sbjct: 73 NYIPENCYSLLSVAGLLEEGYQ 94
>IMGA|Medtr8g096240.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 21119820-21118370 E
EGN_Mt090430 20090702
Length = 93
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 911 NLELEQLDVKTAFLHGDLEEEIYMEQPEGFKVKGKE-DMVCRLKKSLYGLKQAPRQW 966
N L QLD+K AF GD+ E++Y+E P F +G D V RL K+ Y LKQ+ R W
Sbjct: 26 NYVLHQLDIKHAFQFGDVIEKVYIEPPPRFIAQGDLCDFVYRLYKASYNLKQSLRAW 82
>IMGA|Medtr6g086660.1 gag-pol polyprotein, related
chr06_pseudomolecule_IMGAG_V3 17762174-17761410 H
EGN_Mt090430 20090702
Length = 254
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 289 WIVDSGASYHCVPKREYFFTYKAGDFG-TIKMGNNSVSQVVGIGDICIKTSVGCTLTLKN 347
W +DSGA++H R F I +GN + +V G G + IK G L L N
Sbjct: 13 WYIDSGATHHMTYDRSLFKELNKTIISCNIIVGNGAPIEVEGFGTVTIKHHSGLKLIL-N 71
Query: 348 VRHIPDLRLNLLSVSVLDKEGYH 370
V ++P L +LLSV L +EGYH
Sbjct: 72 VFYVPKLTSSLLSVPQLLEEGYH 94
>IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein,
chr08_pseudomolecule_IMGAG_V3 22106944-22106630 H
EGN_Mt090430 20090702
Length = 104
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 827 MQEEMNSLKKNDTYEPVKLPKGKRTLKNKWVYKLK-KDDGNLVRYKARLVVKGFTQKKGI 885
M ++ ++ + + L K K + KW Y++K K +G + R+K L+VK +T+++G+
Sbjct: 1 MTNKLRAITTKNAWSLTALSKDKVVIGCKWEYRIKHKVNGTIERFKTFLMVKDYTRQEGV 60
Query: 886 DFDEIFSPVVKMSSIRVVLGLVANLNLELEQLD 918
+ + FS V K++ + ++L +V L+QLD
Sbjct: 61 NSLDTFSLVAKITIVCLLLSIVVAKGRILQQLD 93