Jatropha Genome Database

JcCB0097441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097441.10 - phase: 2 /pseudo/partial
         (229 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g127680.1 Alg9-like mannosyltransferase chr08_pseudom...   180   5e-46

>IMGA|Medtr8g127680.1 Alg9-like mannosyltransferase
           chr08_pseudomolecule_IMGAG_V3 29602186-29605794 E
           EGN_Mt090430 20090702
          Length = 531

 Score =  180 bits (456), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 87/129 (67%), Positives = 104/129 (80%), Gaps = 2/129 (1%)

Query: 76  GDYYGTHKWHWYFSQGFSAMLFTFLPFAIAGSIKSKCWKLSGLIAWVLIVYSILGHKEFR 135
           GDYYGTHKWHWYF+QGF+ M+F+ LPF IAG + SK WK SGL+AWVL  YSILGHKEFR
Sbjct: 268 GDYYGTHKWHWYFTQGFTVMIFSHLPFCIAGIVYSKQWKFSGLLAWVLGFYSILGHKEFR 327

Query: 136 FVLPVLPVALIFSGYALSVMARPDSPNGDRKGS--SKSHNKCLSKVGFAVIFLLCTNIPM 193
           FVLPVLP+AL+FSGY+L+V+  P + + + KG   SK  NKC  K+  A++FLL TNIPM
Sbjct: 328 FVLPVLPIALMFSGYSLAVIEDPSAGSLEYKGKGFSKKKNKCPPKMTVAILFLLATNIPM 387

Query: 194 ALYMSLVHQ 202
           ALYMSLVHQ
Sbjct: 388 ALYMSLVHQ 396