Jatropha Genome Database

JcCB0096691.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0096691.20 - phase: 0 
         (377 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g024740.1 AtGRF5, putative chr08_pseudomolecule_IMGAG...   119   3e-27
IMGA|Medtr5g027250.1 QLQ chr05_pseudomolecule_IMGAG_V3 11063203-...   115   4e-26
IMGA|Medtr7g126820.1 QLQ chr07_pseudomolecule_IMGAG_V3 29551657-...   114   9e-26
IMGA|Medtr3g123080.1 hypothetical protein chr03_pseudomolecule_I...   103   1e-22
IMGA|AC233070_21.1 WRC AC233070.4 97780-96320 E EGN_Mt090430 200...    80   2e-15
IMGA|Medtr8g151300.1 hypothetical protein chr08_pseudomolecule_I...    80   2e-15
IMGA|Medtr8g151010.1 hypothetical protein chr08_pseudomolecule_I...    56   3e-08

>IMGA|Medtr8g024740.1 AtGRF5, putative chr08_pseudomolecule_IMGAG_V3
           4736562-4735415 E EGN_Mt090430 20090702
          Length = 231

 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 9/117 (7%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWS 173
           FT +Q  EL+QQAL++KY+    P+P +L+  +K +L       ++ S+  FP   +GW 
Sbjct: 12  FTPNQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLD------TSISSRIFPHPPIGWG 65

Query: 174 SLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
              +G+       D EPGRCRRTDGKKWRCS++   D KYCE+HM+RGR RSRKPVE
Sbjct: 66  CFEMGF---GRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE 119


>IMGA|Medtr5g027250.1 QLQ chr05_pseudomolecule_IMGAG_V3
           11063203-11066007 E EGN_Mt090430 20090702
          Length = 324

 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 74/117 (63%), Gaps = 21/117 (17%)

Query: 114 FTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWS 173
           FT SQ  EL+ QALI+KY+ A + VP +LL+P++ +L+     +S PS            
Sbjct: 17  FTVSQWQELEHQALIFKYLKAGLSVPPDLLLPIRKSLQ----FMSHPS------------ 60

Query: 174 SLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
              LGY G     D EPGRCRRTDGKKWRC+RD   D KYC++HM R RYRSRKPVE
Sbjct: 61  ---LGYYGKKI--DPEPGRCRRTDGKKWRCARDAHPDSKYCDRHMIRRRYRSRKPVE 112


>IMGA|Medtr7g126820.1 QLQ chr07_pseudomolecule_IMGAG_V3
           29551657-29554134 E EGN_Mt090430 20090702
          Length = 384

 Score =  114 bits (285), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 9/122 (7%)

Query: 109 GVTVAFTASQRMELKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSN 168
           G+   F+ SQ  EL+ QALI++Y+     VP  LL P+K +L          S+ +F  +
Sbjct: 74  GMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSL--------LHSSPYFLHH 125

Query: 169 SLGWSSLRLGYMGSSTSRDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKP 228
               + L+ GY G   + D EPGRCRRTDGKKWRC+RD VA QKYCE+HM+RGR RSRKP
Sbjct: 126 YQPTALLQSGYWGRG-AMDPEPGRCRRTDGKKWRCARDVVAGQKYCERHMHRGRNRSRKP 184

Query: 229 VE 230
           VE
Sbjct: 185 VE 186


>IMGA|Medtr3g123080.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 30781101-30775833 E
           EGN_Mt090430 20090702
          Length = 553

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 39/165 (23%)

Query: 73  GDDGLMERSGQSYTAFPYYRSASYSRSIDYGRENLNGVTVA-------FTASQRMELKQQ 125
           G + +++  G S    P++  ++ + ++  G     G+  +       FT++Q  EL++Q
Sbjct: 71  GANAIIDNGGVSLNFQPFHNISASNTTLKAG-----GMAASIGIGYPPFTSAQWRELERQ 125

Query: 126 ALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWSSLRLGYMGSSTS 185
           A+IYKY+ AS+PVP +LL               +   GF         +LRL    +  +
Sbjct: 126 AMIYKYLMASLPVPSHLL---------------SLDGGF---------NLRLS---NRNN 158

Query: 186 RDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVE 230
            D E GRC+RTDGKKWRCS+D   + +YCE+HM+RGR RSRKPVE
Sbjct: 159 TDPEAGRCKRTDGKKWRCSKDVALNNRYCERHMHRGRPRSRKPVE 203


>IMGA|AC233070_21.1 WRC AC233070.4 97780-96320 E EGN_Mt090430
           20090702
          Length = 331

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 38/45 (84%)

Query: 187 DSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEA 231
           D EP RCRRTDGKKWRC +DTV +QKYCE+HM+RGR RSRK VE 
Sbjct: 3   DQEPHRCRRTDGKKWRCGKDTVPNQKYCERHMHRGRNRSRKLVET 47



 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 122 LKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWSSLRLGYMG 181
            KQ   I + I+ +V +        K ++     G+S    GF P + L  S     Y+ 
Sbjct: 140 CKQDEQIKRCITDNVGIKSGR----KGSISCESIGIST-GIGFSPKSVLPVSGCNDSYLN 194

Query: 182 SSTS-RDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYR 224
           +  +  + EPGRCRRTDGKKWRC    +  QKYC  HM+RG  R
Sbjct: 195 NRNNILEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKR 238


>IMGA|Medtr8g151300.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 37276699-37275239 E
           EGN_Mt090430 20090702
          Length = 331

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 38/45 (84%)

Query: 187 DSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYRSRKPVEA 231
           D EP RCRRTDGKKWRC +DTV +QKYCE+HM+RGR RSRK VE 
Sbjct: 3   DQEPHRCRRTDGKKWRCGKDTVPNQKYCERHMHRGRNRSRKLVET 47



 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 6/104 (5%)

Query: 122 LKQQALIYKYISASVPVPDNLLIPLKSNLRPHPYGLSAPSAGFFPSNSLGWSSLRLGYMG 181
            KQ   I + I+ +V +        K ++     G+S    GF P + L  S     Y+ 
Sbjct: 140 CKQDEQIKRCITDNVGIKSGR----KGSISCESIGIST-GIGFSPKSVLPVSGCNDSYLN 194

Query: 182 SSTS-RDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYR 224
           +  +  + EPGRCRRTDGKKWRC    +  QKYC  HM+RG  R
Sbjct: 195 NRNNILEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKR 238


>IMGA|Medtr8g151010.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 37149734-37150240 H
           EGN_Mt090430 20090702
          Length = 168

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 167 SNSLGWSSLRLGYMGSSTS-RDSEPGRCRRTDGKKWRCSRDTVADQKYCEKHMNRGRYR 224
           S+ +  S     Y+ ++ S  + EPGRCRRTDGKKWRC    +  QKYC   M+RG  R
Sbjct: 31  SDVISVSGCNDSYLNNTNSILEPEPGRCRRTDGKKWRCKSAVLPGQKYCATLMHRGAKR 89