Jatropha Genome Database

JcCB0096461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0096461.10 - phase: 2 /partial
         (342 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g147720.1 bZIP transcription factor, bZIP_1 chr03_pse...   150   8e-37
IMGA|Medtr4g129920.1 bZIP transcription factor, bZIP_1 chr04_pse...   129   2e-30
IMGA|Medtr7g104860.1 bZIP transcription factor, bZIP_1 chr07_pse...    63   2e-10
IMGA|Medtr8g047750.1 bZIP transcription factor, bZIP_1 chr08_pse...    60   2e-09
IMGA|Medtr5g095290.1 bZIP transcription factor, bZIP_1 chr05_pse...    58   9e-09
IMGA|Medtr3g016390.1 bZIP transcription factor, bZIP_1 chr03_pse...    56   2e-08
IMGA|Medtr2g107870.1 bZIP transcription factor, bZIP_1 chr02_pse...    55   5e-08
IMGA|Medtr1g125010.1 bZIP transcription factor, bZIP_1 chr01_pse...    50   2e-06
IMGA|Medtr8g089320.1 Basic-leucine zipper (bZIP) transcription f...    49   3e-06
IMGA|Medtr7g127260.1 Basic leucine zipper chr07_pseudomolecule_I...    48   9e-06

>IMGA|Medtr3g147720.1 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 38313295-38308510 E
           EGN_Mt090430 20090702
          Length = 431

 Score =  150 bits (379), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 93/191 (48%), Positives = 113/191 (59%), Gaps = 21/191 (10%)

Query: 167 LFPKPTNLAFA-DVRLANGAQLASPGIRSSVAGIA-DTNIKNNLVHGGGMRMVGLGTAGV 224
           +FPK   L +A  + L+N     + G+R  + G++ D  +  NLV GGG+ MVGL    V
Sbjct: 247 IFPKQPGLNYATQMPLSN-----NQGMRGGIVGLSPDHGMNGNLVQGGGIGMVGLAPGAV 301

Query: 225 PVATGSPANHISPDMITKGNADTPSSLSPVPNTFG---RGRKASAALDKVIERRHRRMIK 281
            +   SPAN IS D + K N DT SS+SPVP  F    RGRK + A++KVIERR RRMIK
Sbjct: 302 QIGAVSPANQISSDKMGKSNGDT-SSVSPVPYVFNGGMRGRKGNGAVEKVIERRQRRMIK 360

Query: 282 NRESAARSRARKQAYTXXXXXXXXXXXXMNQELQRK----------QFLESMNRQWGSKR 331
           NRESAARSRARKQAYT             N+ELQ+K          Q  E MN Q   KR
Sbjct: 361 NRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMELQKNQVKEMMNLQREVKR 420

Query: 332 QCLRRTLTGPW 342
           +CLRRT TGPW
Sbjct: 421 KCLRRTQTGPW 431



 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 54/99 (54%), Gaps = 11/99 (11%)

Query: 18  KRQQTLGEMTLEEFLARAGVVREDTQLIGRSNNGGFFDEXXXXXXXXXXXXXXXXXFQQA 77
           +RQ TLGEMTLEEFL RAGVVRED     + N+G F D                   QQ 
Sbjct: 122 QRQPTLGEMTLEEFLVRAGVVREDA----KPNDGVFLDLGNVGNNGNLGLAFQA---QQM 174

Query: 78  NHNSGLMGTGIVENNN---LVGSQ-PSNLALNVGGIRSS 112
           N  +G MG G   N N   LVG Q P+NL LNV GIRS+
Sbjct: 175 NKVAGFMGNGNRINGNDDPLVGLQSPTNLPLNVNGIRST 213


>IMGA|Medtr4g129920.1 bZIP transcription factor, bZIP_1
           chr04_pseudomolecule_IMGAG_V3 31039879-31043409 E
           EGN_Mt090430 20090702
          Length = 376

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/183 (46%), Positives = 105/183 (57%), Gaps = 25/183 (13%)

Query: 167 LFPKPTNLAFAD-VRLANGAQLASPGIRSSVAGIADTNIKNNLVHGGGMRMVGLGTAGVP 225
           LFPKPT +AFA  + L N AQL + G RS                G G+  +GL  + + 
Sbjct: 212 LFPKPTTVAFASPMHLLNNAQLGNNG-RSV---------------GPGVGTLGLSASNIT 255

Query: 226 VATGSPANHISPDMITKGNADTPSSLSPVPNTFGRGRKASAALDKVIERRHRRMIKNRES 285
               SP + +SPD+ITK N D PS LSPVP    RGRK    ++K +ERR +RMIKNRES
Sbjct: 256 APVASPGSKMSPDLITKRNLD-PSLLSPVPYAINRGRKC-VPVEKGVERRQKRMIKNRES 313

Query: 286 AARSRARKQAYTXXXXXXXXXXXXMNQELQRKQ--FLESMNRQWG----SKRQCLRRTLT 339
           AARSRARKQAYT            +N+ELQRKQ  F+E    +      +K + LRRTLT
Sbjct: 314 AARSRARKQAYTVELEAEVAKLKEVNEELQRKQAEFMEMQKSKEDLVRTNKIKYLRRTLT 373

Query: 340 GPW 342
           GPW
Sbjct: 374 GPW 376



 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 51/96 (53%), Gaps = 17/96 (17%)

Query: 18  KRQQTLGEMTLEEFLARAGVVREDT----QLIGRSNNGGFFDEXXXXXXXXXXXXXXXXX 73
           +RQ TLGE+TLEEFL RAGVV+EDT    Q I R NN  +F +                 
Sbjct: 118 QRQPTLGEVTLEEFLVRAGVVKEDTPNHAQQIERPNNNEWFSD-----FSRSNNNTNLLG 172

Query: 74  FQQANHNSGLMGTGIVENNNLVGSQ----PSNLALN 105
           FQQ N N+G M     +NNNLV       PS++ LN
Sbjct: 173 FQQPNGNNGDMS----DNNNLVPKHVPLPPSSINLN 204


>IMGA|Medtr7g104860.1 bZIP transcription factor, bZIP_1
           chr07_pseudomolecule_IMGAG_V3 23917021-23913325 E
           EGN_Mt090430 20090702
          Length = 320

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 6/101 (5%)

Query: 247 TPSSL---SPVPNTFGRGRKAS-AALDKVIERRHRRMIKNRESAARSRARKQAYTXXXXX 302
           +PSSL   S    T GR R AS   ++K +ERR +RMIKNRESAARSRARKQAYT     
Sbjct: 219 SPSSLMATSSDTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEI 278

Query: 303 XXXXXXXMNQELQRKQFLESM--NRQWGSKRQCLRRTLTGP 341
                   N+ L+R   +E +  +      +  LRRT + P
Sbjct: 279 KVSHLEEENERLKRLHEIERVLPSMPPPDPKHQLRRTSSAP 319


>IMGA|Medtr8g047750.1 bZIP transcription factor, bZIP_1
           chr08_pseudomolecule_IMGAG_V3 10819105-10821284 E
           EGN_Mt090430 20090702
          Length = 308

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 261 GRKASAALD---KVIERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXMNQELQRK 317
           GRK S   D   K +ERR +RMIKNRESAARSRARKQAYT             N+ L+++
Sbjct: 222 GRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKR 281

Query: 318 QFLESM 323
           + LE+M
Sbjct: 282 KELENM 287


>IMGA|Medtr5g095290.1 bZIP transcription factor, bZIP_1
           chr05_pseudomolecule_IMGAG_V3 37754591-37758985 E
           EGN_Mt090430 20090702
          Length = 264

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 38/63 (60%)

Query: 259 GRGRKASAALDKVIERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXMNQELQRKQ 318
           GR R A  A +K +ERR RR IKNRESAARSRARKQAY              N +L++++
Sbjct: 179 GRKRDAPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVTKVTLLEQQNMQLKKEK 238

Query: 319 FLE 321
             E
Sbjct: 239 EFE 241


>IMGA|Medtr3g016390.1 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 3166755-3168592 E
           EGN_Mt090430 20090702
          Length = 300

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 186 QLASPGIRSSVAGIADTNIKNNLVHGGGMRMVGLGTAGVPVATGSPANHISPDMITKGN- 244
           Q A P  +     +  T + + ++        G  +  VP   G  A  ++  +I  GN 
Sbjct: 175 QYAQPHYQHPQQSVMATYVPSQIIAQSLHMAAGAPSDSVPYTDGQVA--LASPVI--GNL 230

Query: 245 ADTPSSLSPVPNTFGRGRKASAALDKVIERRHRRMIKNRESAARSRARKQAYTXXXXXXX 304
           +DT  S         R R     +++ +ER+ +RMIKNRESAARSRARKQAYT       
Sbjct: 231 SDTQKS--------ARKRGPEDMIERTVERKQKRMIKNRESAARSRARKQAYTTELEIKV 282

Query: 305 XXXXXMNQELQRKQFL 320
                 N +L++++ +
Sbjct: 283 SRLEEENDKLRKEKLV 298


>IMGA|Medtr2g107870.1 bZIP transcription factor, bZIP_1
           chr02_pseudomolecule_IMGAG_V3 25477813-25476338 E
           EGN_Mt090430 20090702
          Length = 296

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 5/64 (7%)

Query: 271 VIERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXMNQELQRKQFLESMNRQWGSK 330
           +++R+ RRM+KNRESAARSRARKQAYT             N++L  KQFL S     G+K
Sbjct: 208 LLDRKQRRMMKNRESAARSRARKQAYTIELEAELNLLQEENKQL--KQFLLSAR---GNK 262

Query: 331 RQCL 334
           R C+
Sbjct: 263 RLCI 266


>IMGA|Medtr1g125010.1 bZIP transcription factor, bZIP_1
           chr01_pseudomolecule_IMGAG_V3 27447192-27442306 E
           EGN_Mt090430 20090702
          Length = 243

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 25/29 (86%)

Query: 268 LDKVIERRHRRMIKNRESAARSRARKQAY 296
           LDK  ++R RRMIKNRESAARSR RKQAY
Sbjct: 157 LDKAAQQRQRRMIKNRESAARSRERKQAY 185


>IMGA|Medtr8g089320.1 Basic-leucine zipper (bZIP) transcription
           factor chr08_pseudomolecule_IMGAG_V3 19167850-19168269 H
           EGN_Mt090430 20090702
          Length = 139

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 26/32 (81%)

Query: 263 KASAALDKVIERRHRRMIKNRESAARSRARKQ 294
           K  A L   IERRH+R++KNRESAARSRARKQ
Sbjct: 95  KVEALLSNSIERRHKRIMKNRESAARSRARKQ 126


>IMGA|Medtr7g127260.1 Basic leucine zipper
           chr07_pseudomolecule_IMGAG_V3 29797969-29803044 E
           EGN_Mt090430 20090702
          Length = 439

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 68/135 (50%), Gaps = 11/135 (8%)

Query: 208 LVHGGGMRMVGLGTAGVPVA----TGSPANHISPDMITKGNADTPSSLSPVPNTF-GRGR 262
           + +GG +     G  GV VA     G P + +S D I  GN ++        N   GR R
Sbjct: 285 ICYGGRVVNGAAGGYGVAVAQTMGMGGPVSPVSSDGI--GNENSGGQFGIDMNGLRGRKR 342

Query: 263 KASAALDKVIERRHRRMIKNRESAARSRARKQAYTXXXXXXXXXXXXMNQELQRKQFLES 322
                +++V+ERR RRMIKNRESAARSRARKQAYT             N +L  KQ L  
Sbjct: 343 MVDGPVERVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQL--KQALAE 400

Query: 323 MNRQWGSKRQCLRRT 337
           + R+   ++QC   T
Sbjct: 401 LERR--RRQQCSEET 413