Jatropha Genome Database

JcCB0096311.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0096311.20 + phase: 0 
         (93 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g122520.1 O-methyltransferase, family 2; Dimerisation...    60   2e-10
IMGA|Medtr5g105850.1 O-methyltransferase, family 2; Dimerisation...    53   4e-08
IMGA|Medtr7g011320.1 Dimerisation chr07_pseudomolecule_IMGAG_V3 ...    49   8e-07
IMGA|Medtr7g146160.2 O-methyltransferase, family 2; Dimerisation...    47   3e-06
IMGA|Medtr7g146160.1 O-methyltransferase, family 2; Dimerisation...    46   5e-06

>IMGA|Medtr3g122520.1 O-methyltransferase, family 2; Dimerisation
          chr03_pseudomolecule_IMGAG_V3 30482804-30490935 E
          EGN_Mt090430 20090702
          Length = 365

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)

Query: 1  MVLKSAVELNIINIVTTATNDGLWLSPVEIAAQIPTKNPDAPVLLDRML 49
          MVLKSA+EL+++ I+  A   G  +SP+EIA+Q+PT NP+APV+LDR+L
Sbjct: 34 MVLKSALELDLLEIIAKA-GPGAQISPIEIASQLPTTNPEAPVMLDRIL 81


>IMGA|Medtr5g105850.1 O-methyltransferase, family 2; Dimerisation
          chr05_pseudomolecule_IMGAG_V3 42539806-42543553 F
          EGN_Mt090430 20090702
          Length = 361

 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)

Query: 1  MVLKSAVELNIINIVTTATNDGLWLSPVEIAAQIPT-KNPDAPVLLDRMLNTCSS 54
          MVLKSA+EL II I+  A  +   LS   IA+QIP+ KNPDAP +LDR+L   +S
Sbjct: 29 MVLKSALELGIIEIIAKAGPNA-HLSSSNIASQIPSIKNPDAPSMLDRLLRLLAS 82


>IMGA|Medtr7g011320.1 Dimerisation chr07_pseudomolecule_IMGAG_V3
          2700064-2699213 E EGN_Mt090430 20090702
          Length = 151

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 2  VLKSAVELNIINIVTTATNDGLWLSPVEIAAQIPTKNPDAPVLLDRML 49
          VL +A+ELN+ +I+   +N G ++S  EIA+++PT++ D P  LDRM 
Sbjct: 39 VLNAAIELNLFDIIANESNGG-FMSSFEIASKLPTQHSDLPNRLDRMF 85


>IMGA|Medtr7g146160.2 O-methyltransferase, family 2; Dimerisation
          chr07_pseudomolecule_IMGAG_V3 34905183-34903873 E
          EGN_Mt090430 20090702
          Length = 257

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 1  MVLKSAVELNIINIVTTATNDGLWLSPVEIAAQIPTKNPDAPVLLDRMLNTCSS 54
          + L+SA++L I +I++ A N G  LS  +IA +I TKNP+A  +LDR+L   +S
Sbjct: 47 LALRSAIDLGIFDILSKAGN-GAQLSADDIAVKIGTKNPEAATMLDRLLRLLAS 99


>IMGA|Medtr7g146160.1 O-methyltransferase, family 2; Dimerisation
          chr07_pseudomolecule_IMGAG_V3 34905183-34903457 E
          EGN_Mt090430 20090702
          Length = 375

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 1  MVLKSAVELNIINIVTTATNDGLWLSPVEIAAQIPTKNPDAPVLLDRMLNTCSS 54
          + L+SA++L I +I++ A N G  LS  +IA +I TKNP+A  +LDR+L   +S
Sbjct: 47 LALRSAIDLGIFDILSKAGN-GAQLSADDIAVKIGTKNPEAATMLDRLLRLLAS 99