Jatropha Genome Database

JcCB0095931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0095931.10 + phase: 0 /partial
         (154 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g009740.1 Dynamin central region; Dynamin; Dynamin GT...   205   6e-54
IMGA|Medtr2g009740.2 Dynamin central region; Dynamin; Dynamin GT...   205   9e-54
IMGA|Medtr4g121440.1 Dynamin central region; Dynamin; Dynamin GT...   147   2e-36
IMGA|Medtr4g121300.1 Dynamin central region; Dynamin; Dynamin GT...   144   1e-35
IMGA|Medtr4g121300.2 Dynamin central region; Dynamin GTPase effe...   143   3e-35

>IMGA|Medtr2g009740.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr02_pseudomolecule_IMGAG_V3
           2202134-2213835 E EGN_Mt090430 20090702
          Length = 835

 Score =  205 bits (522), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 102/156 (65%), Positives = 121/156 (77%), Gaps = 3/156 (1%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KN+ED +PKAIMHF VN+TKRELHNVFIKKLYR+NLFEEMLQEPDEIA+KRK  R+ LR 
Sbjct: 680 KNVEDFVPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPDEIASKRKRCRELLRA 739

Query: 61  LQQAFRTLDELPLEAETVERGYSLGADTTGLPKIRGLPTXXXXXXXXXXXXXXXXPRNTK 120
            QQAF+ L+ELP+EAET+ERGYSL  +TTGLPKI GLPT                P++ K
Sbjct: 740 YQQAFKDLEELPMEAETLERGYSL-PETTGLPKIHGLPTSSMYSTNSSGDYYGASPKHPK 798

Query: 121 SRKSSHSGELQSHFYANAESNGSGQPYV--LYPTVD 154
           S++SSHSGELQS FYANA+SNG+G+      YPT+D
Sbjct: 799 SKRSSHSGELQSPFYANADSNGNGKQSASGFYPTLD 834


>IMGA|Medtr2g009740.2 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr02_pseudomolecule_IMGAG_V3
           2202134-2213835 E EGN_Mt090430 20090702
          Length = 497

 Score =  205 bits (521), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 102/156 (65%), Positives = 121/156 (77%), Gaps = 3/156 (1%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KN+ED +PKAIMHF VN+TKRELHNVFIKKLYR+NLFEEMLQEPDEIA+KRK  R+ LR 
Sbjct: 342 KNVEDFVPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEMLQEPDEIASKRKRCRELLRA 401

Query: 61  LQQAFRTLDELPLEAETVERGYSLGADTTGLPKIRGLPTXXXXXXXXXXXXXXXXPRNTK 120
            QQAF+ L+ELP+EAET+ERGYSL  +TTGLPKI GLPT                P++ K
Sbjct: 402 YQQAFKDLEELPMEAETLERGYSL-PETTGLPKIHGLPTSSMYSTNSSGDYYGASPKHPK 460

Query: 121 SRKSSHSGELQSHFYANAESNGSGQPYV--LYPTVD 154
           S++SSHSGELQS FYANA+SNG+G+      YPT+D
Sbjct: 461 SKRSSHSGELQSPFYANADSNGNGKQSASGFYPTLD 496


>IMGA|Medtr4g121440.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr04_pseudomolecule_IMGAG_V3
           28476356-28485660 E EGN_Mt090430 20090702
          Length = 766

 Score =  147 bits (371), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/99 (74%), Positives = 82/99 (82%), Gaps = 2/99 (2%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KN+ED IPKAIMHF VN+TKRELHNVFI  LYR++LFEEMLQEP+EIA KRK  R+ LR 
Sbjct: 655 KNVEDLIPKAIMHFLVNNTKRELHNVFIANLYRDDLFEEMLQEPNEIAVKRKRCRELLRA 714

Query: 61  LQQAFRT-LDELPLEAETVERGYSLGADTTGLPKIRGLP 98
            QQAFR  LDELPLEAET E G+S   +TTGLPKIRGLP
Sbjct: 715 YQQAFRADLDELPLEAETAEWGHS-SPETTGLPKIRGLP 752


>IMGA|Medtr4g121300.1 Dynamin central region; Dynamin; Dynamin
           GTPase effector chr04_pseudomolecule_IMGAG_V3
           28401923-28411225 E EGN_Mt090430 20090702
          Length = 761

 Score =  144 bits (364), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 2/98 (2%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KN+ED IPKAIMHF VN+TKRELHNVFI  LYR++LFEEMLQEP+EIA KRK  R+ LR 
Sbjct: 657 KNVEDLIPKAIMHFLVNNTKRELHNVFIANLYRDDLFEEMLQEPNEIAVKRKRCRELLRA 716

Query: 61  LQQAFRT-LDELPLEAETVERGYSLGADTTGLPKIRGL 97
            QQAFR  LDELPLEAET E G+S   +TTGLPKIRGL
Sbjct: 717 YQQAFRADLDELPLEAETAEWGHS-SPETTGLPKIRGL 753


>IMGA|Medtr4g121300.2 Dynamin central region; Dynamin GTPase
           effector chr04_pseudomolecule_IMGAG_V3 28404631-28411225
           E EGN_Mt090430 20090702
          Length = 316

 Score =  143 bits (361), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 2/98 (2%)

Query: 1   KNIEDSIPKAIMHFWVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIATKRKHTRDKLRV 60
           KN+ED IPKAIMHF VN+TKRELHNVFI  LYR++LFEEMLQEP+EIA KRK  R+ LR 
Sbjct: 212 KNVEDLIPKAIMHFLVNNTKRELHNVFIANLYRDDLFEEMLQEPNEIAVKRKRCRELLRA 271

Query: 61  LQQAFRT-LDELPLEAETVERGYSLGADTTGLPKIRGL 97
            QQAFR  LDELPLEAET E G+S   +TTGLPKIRGL
Sbjct: 272 YQQAFRADLDELPLEAETAEWGHS-SPETTGLPKIRGL 308