Jatropha Genome Database
- JcCB0095561.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0095561.20 - phase: 2 /TE
(241 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H... 97 1e-20
IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase... 86 2e-17
IMGA|Medtr8g037100.1 hypothetical protein chr08_pseudomolecule_I... 82 3e-16
IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H... 80 6e-16
IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial chr... 78 5e-15
IMGA|Medtr8g024620.1 hypothetical protein chr08_pseudomolecule_I... 73 1e-13
IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H... 71 4e-13
IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fo... 69 2e-12
IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H... 69 2e-12
IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse transc... 68 4e-12
IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase... 66 2e-11
IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse transc... 66 2e-11
IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse transc... 65 3e-11
IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse transc... 63 1e-10
IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V... 60 1e-09
IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H... 57 6e-09
IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase... 57 1e-08
IMGA|AC225611_8.1 contains similarity to reverse trancriptase, r... 56 1e-08
IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse transc... 56 2e-08
IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse transc... 55 3e-08
IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse transc... 54 5e-08
IMGA|Medtr1g140870.1 Polynucleotidyl transferase, Ribonuclease H... 54 8e-08
IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase... 53 1e-07
IMGA|Medtr2g056130.1 hypothetical protein chr02_pseudomolecule_I... 52 2e-07
IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3 220... 50 1e-06
IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 50 1e-06
IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related chr08_... 49 1e-06
IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse transc... 49 2e-06
IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse transc... 49 3e-06
IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse transc... 48 3e-06
IMGA|Medtr3g080050.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 48 3e-06
IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse transc... 47 6e-06
>IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 9482517-9480709 E
EGN_Mt090430 20090702
Length = 602
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENAT--MSHLILQNPKQWNVDLISAIF 59
W +G+G + I D WL N ++ P SN N+ + L+ + P WN +L+ F
Sbjct: 156 WRIGNGDQVHIQSDNWLPYNNGYK----PIYSNPNSPPMVKDLLTEFPFDWNYNLLQQNF 211
Query: 60 AREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVS-T 118
+ +I + + DV + G Y V+SGY + + S SS V+ T
Sbjct: 212 LPMDSSQIAQLPIIHPNKPDVLMWMFDLSGSYTVKSGYNAIQNWKATASNDSSASSVNNT 271
Query: 119 AWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGC 178
W++LW +P+ K + R N LP D+L++RG+ ++ C ++ E + H C
Sbjct: 272 LWQKLWNLKTIPRHKSLLWRILNNSLPLRDNLLRRGIQCSILCPRCNIKEETMTHLFMRC 331
Query: 179 ILGEQVWKYSHLRLTTSKCQALSFMEWFA-TIISKFQKEQIELFLMTAWAIWHAQN 233
E+VW S L + F +W A TI++K I++ +T +++W+A+N
Sbjct: 332 SHSERVWFGSQLSIQMPSISNQQFSDWIAETILNKDSNTVIQVAAIT-YSLWYARN 386
>IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
17724162-17724986 H EGN_Mt090430 20090702
Length = 274
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 10/224 (4%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFAR 61
W VG+G+ I I +D+WL D N ++ S+ + + +S LI WN LI +F
Sbjct: 41 WTVGNGNLINIWEDRWLPDQNGFKVFSKKPNNCDIQKVSDLIDYTTLSWNTPLIHKLFLP 100
Query: 62 EEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLL---HEDSLSQSYASSFV--PV 116
E +I I L D + + +G Y V+ GY + E + Q SS P+
Sbjct: 101 FETDQIHQIPLINTNEDDDLVWAHTNNGSYSVKYGYHFIKNREEQAQGQPGNSSTCCDPI 160
Query: 117 STAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALK 176
S K LW Q I + R N LP +L+Q G+ D + CG IE + H
Sbjct: 161 S---KNLWNQTIPQNKIQLIWRIMNNGLPVKRNLMQCGIRCDPLCPGCGNHIESISHTFM 217
Query: 177 GCILGEQVWKYSHLRLTTSKCQA--LSFMEWFATIISKFQKEQI 218
C ++VW S L L F+EW + + K K+++
Sbjct: 218 QCSWVQRVWFASPLTLNFQNLDPDHPEFIEWLSLQLQKGDKKKL 261
>IMGA|Medtr8g037100.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 7957038-7958530 H
EGN_Mt090430 20090702
Length = 410
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +GDG +I + + W+ D L + N +S +L N K W+V + +IF+
Sbjct: 61 RWKIGDGMSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPNQKSWDVPFLHSIFS 120
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
+ + I+ L D I + +Y VRS Y L L++ +S V AW
Sbjct: 121 EQIVEHIVATPLYSSVREDQLIWKKENNEEYSVRSAYRL----CLNELLDTSHFKVEGAW 176
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
+W+ + P+VK+ + R C+N LP L +G+ V +C L E +H L C
Sbjct: 177 DLVWKLKVPPRVKNLIWRICRNFLPTRKRLRDKGVNCTTVCALCNLEEEGSMHLLFKCAG 236
Query: 181 GEQVW 185
+W
Sbjct: 237 SMNIW 241
>IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
31059249-31058149 H EGN_Mt090430 20090702
Length = 344
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +GDG+ IR+ D WL + + + S + ++ L+++ K+W+VD I + +
Sbjct: 8 RWRIGDGTQIRVMHDPWLRNEHGGWLASPQNQDVYDLFLADLMIEGGKEWDVDKIFDLLS 67
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
E +L L D I ++G Y V++GY + D + S V W
Sbjct: 68 FESANSVLKTPLFPSVQDDQVIWQEEQNGVYSVKTGYRIDARDVVPASQYQ----VRGDW 123
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
+LW+ PK ++ + R C +P LV R + + CGL E HA GC +
Sbjct: 124 NKLWKVCSPPKARNLLWRICPGCIPTRVKLVHRQVPCAYLCPWCGLEAETDWHAFIGCTI 183
Query: 181 GEQVWKYSHL 190
++ W ++ L
Sbjct: 184 AKESWSFAGL 193
>IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial
chr05_pseudomolecule_IMGAG_V3 35125187-35123779 E
EGN_Mt090430 20090702
Length = 360
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 42 LILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLH 101
L++ +P WN LI F E +I + L + N D + S+ G Y V++GY +
Sbjct: 5 LLIGSPPDWNKKLIEDTFIPFEGIQIQQLPLTDKENQDSLMWMFSETGVYSVKTGYQAIQ 64
Query: 102 --EDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDV 159
+++ Q +S + + T WK++W +P+ K + + LP L+ RG+ +
Sbjct: 65 CWKNNRDQGPSSEEI-MKTVWKKVWGLQTIPRHKVLIWKIINRALPVRSELINRGIRCSL 123
Query: 160 VGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFMEWFATIISKFQKEQIE 219
+ C IE + H C + W S L + F++W + I K I
Sbjct: 124 LCPRCDSTIETINHLFLNCEHTRREWFGSQLGINFQNENLTDFIDWLISFILNNDKSTII 183
Query: 220 LFLMTAWAIWHAQNLLKFEHK 240
+++WHA+N L F++K
Sbjct: 184 TMAALLYSVWHARNQLVFKNK 204
>IMGA|Medtr8g024620.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E
EGN_Mt090430 20090702
Length = 587
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 35 ENATMSHLILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVR 94
++A + LI N + WN D+I F ++IL L + D I K+G Y VR
Sbjct: 199 QHAKIHSLIDHNLRCWNQDVIHCYFDNSTAQQILKTPLFRQVEEDQLIWKAEKNGHYSVR 258
Query: 95 SGYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRG 154
S Y + E+ SY + W +W+ PKVK+ + R C LP L+ +
Sbjct: 259 SAYRICMEEIGDNSY----LHRPGFWNGIWKLKASPKVKNLIWRICLGCLPTRAKLLDKR 314
Query: 155 MLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLR------LTTSKCQALSFMEWFAT 208
+ + +C E +H L C +W+ SHL + T+ A + +
Sbjct: 315 VNCTSMCSMCDGNYEDDLHVLFDCQRARSIWRDSHLSNDIYVAMQTNNTAA----DIVSA 370
Query: 209 IISKFQKEQIELFLMTAWAIWHAQNL 234
++ +I+LF+ W++W ++N+
Sbjct: 371 LLQNLPHTKIQLFVTLVWSLWKSRNI 396
>IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 19822787-19820648 H
EGN_Mt090430 20090702
Length = 612
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 6/236 (2%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +G G I WL D I + + I Q+ K W LI ++F
Sbjct: 165 RWRIGSGVNIPFLGAPWLKDGLSLSITNPIFEPLMQVKLCDFIEQDVKMWKAPLIHSLFD 224
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
+ IL L D I K+G Y ++S Y + +++ +S + V+ W
Sbjct: 225 AQTAELILNTPLQPLVLEDKMIWKGEKNGTYSLKSAYRI----CVTEIADNSHMHVNGRW 280
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
+W+ + PK+K F+ R C+ P L RG+ + C E IH L C
Sbjct: 281 NLIWKLKVPPKIKKFLWRVCRGCFPTRARLNSRGVSCPLDCVHCNHNYEDSIHILIECPK 340
Query: 181 GEQVWKYSHLRLTTSKC--QALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQNL 234
QVW+ ++L T + Q + T++ + EL W++W +N+
Sbjct: 341 VVQVWRNANLWDTIDRVIHQDYNISALIFTLLQNLSSGKCELMATIMWSLWKCRNM 396
>IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fold
AC225507.11 35556-36938 E EGN_Mt090430 20090702
Length = 358
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 86 SKHGKYIVRSGYGLLHE-DSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHL 144
S +G Y V+SGY L + S S+ + WK+LW + +P+ K V R N L
Sbjct: 5 SNNGNYTVKSGYEALQSWKNNSNPGPSTSSQNNNIWKKLWALHTIPRHKMIVWRILHNTL 64
Query: 145 PAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFME 204
P L +RG+ + C +E H C ++VW S L + ++F +
Sbjct: 65 PVRTELNKRGVNCPPLCPRCYSNLETTNHIFMSCERTQRVWFGSQLSIRFPDNSTINFSD 124
Query: 205 WFATIISKFQKEQIELFLMTAWAIWHAQNLLKFEH 239
W IS +E I ++IWHA+N FE+
Sbjct: 125 WLFDAISNQTEEIIIKISAITYSIWHARNKAIFEN 159
>IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 31444078-31442691 H
EGN_Mt090430 20090702
Length = 404
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+WI+G G I + + W+ + + +S + ++ HLI Q+ K WN L+ IF
Sbjct: 8 RWIIGSGYDISMINEPWIGMGLRVPPAAPDDLSYQGYSVGHLIHQDVKTWNEPLVICIFE 67
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHED--SLSQSYASSFVPVST 118
++IL L L+ N D + K+G+Y VRS Y + E+ +S + + F
Sbjct: 68 AGTAQQILNTPLFLQVNEDKLVWKPEKNGQYSVRSAYRVCVEEIADMSHLHTNGF----- 122
Query: 119 AWKQLWQQNILPKVKHFVHRACKNHLPA 146
W +W+ + PKVK+ + R C+ LP
Sbjct: 123 -WGGIWKLKVPPKVKNMLWRVCRECLPT 149
>IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35324945-35323011 H EGN_Mt090430 20090702
Length = 613
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 42 LILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLH 101
LI+ N WN +L++ F + I I + + D + K G Y V+SGY +
Sbjct: 205 LIMVNSSTWNSELLNNQFLGIDTEAIEQIPIIDIFHRDTLMWMFEKTGSYTVKSGYTAIQ 264
Query: 102 EDSLSQSYASSFVPVSTA-WKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVV 160
+ S +T WK++W + +P+ K + R N +P L +RG+L +
Sbjct: 265 IWKNGSQNSPSSSSENTKLWKKIWNLHTIPRHKTILWRILNNSIPLRSELGKRGVLCSPL 324
Query: 161 GEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFMEWFATIISKFQKEQIEL 220
C +IE H C ++W S+L L T SF +W I +++ I
Sbjct: 325 CPRCETKIETTDHIFMHCPNISKIWFRSNLNLKTLDLPIPSFRDWLMHSILTLKEDTIIQ 384
Query: 221 FLMTAWAIWHAQNLLKFEH 239
+ IW A+N +EH
Sbjct: 385 IASITYNIWQARNQSIYEH 403
>IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
7642559-7645649 E EGN_Mt090430 20090702
Length = 541
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATM-SHLILQNPKQWNVDLISAIFA 60
W +G+G +RI +D W+ RI + P + N + + LI + WN +++ F
Sbjct: 172 WKIGNGQKVRIWEDNWIPTHQNLRIFT-PNMGNPDVVLVKDLINTDEPSWNNSILNTHFL 230
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTA- 119
+ +I I L N D I ++ G Y VRSGY + ++ S + T
Sbjct: 231 SIDKDQIECIPLINLANDDEIIWHFNQDGNYTVRSGYQAIQNWKITTISEPSNSNIETNL 290
Query: 120 WKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGL------RIERVIH 173
WK+LW + +P+ K + R N LP L +RG+L + + L R ER IH
Sbjct: 291 WKKLWTIHTIPRHKMILWRVLNNTLPLRSELGKRGILCNPLCPRYLLEDEIIRRAERSIH 350
>IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
25061037-25062481 E EGN_Mt090430 20090702
Length = 407
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFAR 61
W +GDG +I I +D W+ ++++ ++ + LI WN ++ F
Sbjct: 204 WRIGDGGSINIWEDNWVPTYKGLKVMTTKGPNHFVNRVKDLINNQESLWNKVILEDQFIS 263
Query: 62 EEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVST-AW 120
+ +I I L N D + + G Y V+SGY L Q +S T W
Sbjct: 264 INIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIW 323
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
K++W + +P+ K + R + LP SL +RG+ + C + E + H C L
Sbjct: 324 KKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPL 383
Query: 181 GEQVWKYSHLRLTTSKCQALSFME 204
++VW S+L + +F+
Sbjct: 384 SKRVWFGSNLCINFDNLPNPNFIN 407
>IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26368918-26367637 H EGN_Mt090430 20090702
Length = 409
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 23/236 (9%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +G+ I + + WL + + + + +N + LI QN WN ++++ F
Sbjct: 8 RWKIGNNINIPMFEAPWLRNGGVISGVGQSSDVLQNVRVHSLIDQNTNGWNYNMVNYYFD 67
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
+ +++I+ + + D I K+G Y V+ ++ ++ S VP+
Sbjct: 68 YDTVQEIIRTPIFHQVEEDALIWKAEKNGHYSVK-------RQAVGIAFGDSKVPL---- 116
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCIL 180
KV +F+ R C++ LP L+ +G+ + +C E H L C
Sbjct: 117 ----------KVNNFLWRVCRDCLPTQARLLDKGVNCTYLCGLCEECYEDTTHVLFDCPK 166
Query: 181 GEQVWKYSHL--RLTTSKCQALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQNL 234
VW + ++++ + E ++ + KE+ E F M W++W ++NL
Sbjct: 167 ARNVWLNCSMVDKVSSVMLNHNTAAEIILALLKELTKEKFEQFAMNLWSLWKSRNL 222
>IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
17349249-17348078 H EGN_Mt090430 20090702
Length = 340
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%)
Query: 117 STAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALK 176
+T WK+LW +P+ K+F+ R N LP L +RG+ + C +IE + HA
Sbjct: 32 TTIWKKLWALKTIPRHKNFLWRVINNSLPLRSELGKRGIQCSPLCPHCNSKIEDINHAFM 91
Query: 177 GCILGEQVWKYSHLRLTTSKCQALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQNLLK 236
C +VW S L + K +F +W + I + + + IW +N
Sbjct: 92 TCSYITRVWFGSQLNINIDKSPITNFSDWISYAIEHNEPDITIQIADLTYHIWFDRNQRV 151
Query: 237 FEHKR 241
FE KR
Sbjct: 152 FEDKR 156
>IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V3
5113686-5112454 H EGN_Mt090430 20090702
Length = 410
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 88 HGKYIVRSGYGLLHEDSLSQSYASS--FVPVSTAWKQLWQQNILPKVKHFVHRACKNHLP 145
+G Y V+SGY + + Q + ++ +T WK+LW+ + +P+ K + R N LP
Sbjct: 35 NGIYSVKSGYQAIRSWQIQQKHNTTPNCSSETTVWKKLWKLHTIPRHKVILWRILHNSLP 94
Query: 146 AADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFMEW 205
L +RG+ ++ C ++E + H C + W S L + +F+ W
Sbjct: 95 VRSELNKRGIHCSILCPRCNSKMETITHTFMTCPNILRTWFGSSLTIKFPDQPNPNFVNW 154
Query: 206 FATIISKFQKEQIELFLMTAWAIWHAQNLLKFEHK 240
I ++ I ++IW ++NL FE+K
Sbjct: 155 LFDFILHEDEQIIIQTAAIIYSIWFSRNLSIFENK 189
>IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
32701852-32701244 H EGN_Mt090430 20090702
Length = 202
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 62 EEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAWK 121
++ I + L R +SD I S +G Y ++S Y + +S S S VS WK
Sbjct: 4 QDTSDICRLPLHSRTHSDTIIWNASPNGSYTIKSAYKMC----VSISDQRSNYHVSGDWK 59
Query: 122 QLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILG 181
+W + PK+KHF R + LP +L G+ VC +E +H C
Sbjct: 60 LIWSLCVAPKIKHFCWRLLRGCLPTRSNLQSCGVHCQSTCVVCNRDLEDEMHMFMHCKFA 119
Query: 182 EQVWKYSHL 190
WK ++L
Sbjct: 120 TDCWKAANL 128
>IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
10317892-10316821 H EGN_Mt090430 20090702
Length = 341
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 8/228 (3%)
Query: 14 KDKWLADTNQHRILS-RPTISNENATMSHLILQNPKQWNVDLISAIFAREEMRKILFISL 72
+D WL H++ S +P+ SN + ++ LI + +WN L++ F + ++IL I +
Sbjct: 65 EDIWLPHQYGHKLWSPKPSGSNIH-LVAELIHEECGRWNAHLVNEFFLPFKAQQILQIPV 123
Query: 73 GLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKV 132
+ D I ++K+ ++ + + + L+ +Y+ S + + W +LW+ +P+
Sbjct: 124 FPSQQQDCFIWAVNKNDEF---TEFLKERRERLNSNYSHSSLQ-NGVWNKLWRVKTIPRH 179
Query: 133 KHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRL 192
H + N LP +L RG+ + +C + E + H C + VW S L L
Sbjct: 180 THLIWCILHNWLPVRSALFNRGVQCSPLCCLCDQQQESINHLFMECGWSKAVWFASPLSL 239
Query: 193 T--TSKCQALSFMEWFATIISKFQKEQIELFLMTAWAIWHAQNLLKFE 238
+ + + F W +++ I+L + +W N F+
Sbjct: 240 IFDINGGEQILFSIWLEHVVAYENNCTIQLIFAICYGLWTLLNKRCFD 287
>IMGA|AC225611_8.1 contains similarity to reverse trancriptase,
related, putative AC225611.10 67770-68780 H EGN_Mt090430
20090702
Length = 336
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 4 VGDGSTIRI*KDKWLADTNQHRILSRPTISNENATM-SHLILQNPKQWNVDLISAIFARE 62
+G+G +I +D W+ + ++LS P + N + LI N +WN D++ A F
Sbjct: 174 IGNGYNTKIWEDNWIPYHSNFKVLS-PKLDTTNINLVKDLIQDNGTEWNTDILQANFIPY 232
Query: 63 EMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLH---EDSLSQSYASSFVPVSTA 119
E I I L NSD + G Y V+SGY + ++ + S+ P
Sbjct: 233 EQDLIKQIPLINHNNSDELMWMKDTDGLYTVKSGYQAIQSWKQNDQDRPTTSNTSP--KI 290
Query: 120 WKQLWQQNILPKVKHFVHRACKNHLP 145
WK+LW +P+ K + R N LP
Sbjct: 291 WKKLWALQTIPRHKMLMWRIINNALP 316
>IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
3889810-3888042 H EGN_Mt090430 20090702
Length = 489
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 42 LILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLH 101
LI ++ K+ NV L+ +F+ + + IL L + + D I ++G Y VRS Y L
Sbjct: 143 LISEHGKRRNVPLVRQVFSNDIVDAILNTPLYDQVHQDRLIWKAERNGCYTVRSAYRLCV 202
Query: 102 EDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVG 161
E + SY +W +W+ + PKVK+ + R C+ LP L +G+
Sbjct: 203 EKLMDVSYLHR----PGSWNNIWRLKVPPKVKNLLVRMCRGCLPTRARLQDKGVSCPTNC 258
Query: 162 EVCGLRIERVIHALKG 177
C + + H L+
Sbjct: 259 GSCDSTVNSIFHMLQN 274
>IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912
E EGN_Mt090430 20090702
Length = 566
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 50 WNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYG-----LLHEDS 104
W+VD I ++F + ++ IL L ++D + +G+Y + +GY LLH D
Sbjct: 381 WDVDKIESLFPDDMVQAILDTPLFAEVHNDRITWMVECNGRYTINTGYKIAMMELLHTDR 440
Query: 105 LSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVC 164
V WK++W+ N K ++ + R C+ +P L R + +V+ C
Sbjct: 441 FH---------VEEEWKRIWKVNSHHKARNLLWRICRGCVPTRLRLQSRHVQCEVICPSC 491
Query: 165 GLRIERVIHALKGCILGEQVWKYSHLRLT 193
+E HA GC + + W ++ L +
Sbjct: 492 DTVVEDDWHAFVGCTVACESWYWAGLSIV 520
>IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
12035165-12036141 H EGN_Mt090430 20090702
Length = 250
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +G+G I + D WL + + S EN ++ L+ N WN LI+A+F
Sbjct: 78 RWRIGNGKNIAVWTDPWLREDKNSVVSSTRVQGTENLKVADLMDSNGVTWNWGLIAALFN 137
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
++ I ++L R D RI + G Y V+S Y E + V W
Sbjct: 138 EQDKAAIAKLALTNREGEDKRIWKFNSQGFYTVKSAYRYAMETLIDNEEYR----VPREW 193
Query: 121 KQLWQQNILPKVKHFVHRACKN 142
++ + I ++K F+ R ++
Sbjct: 194 LKMLKMQIPQRIKVFLWRVLRD 215
>IMGA|Medtr1g140870.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31282395-31281349 H
EGN_Mt090430 20090702
Length = 309
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 12/152 (7%)
Query: 91 YIVRSGYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSL 150
Y V++GY L S ++ + ++ +WK +W+ K+K A LP L
Sbjct: 5 YSVKAGYQWL----TSHVNSNVMLAIAGSWKWIWRVAAPEKIKFLFWTAYHQSLPTRGML 60
Query: 151 VQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFMEWFAT-- 208
RGML C + E ++H + C+ Q+W L+ FME +
Sbjct: 61 QHRGMLHSASCPRCPMENENIMHCFRDCVFARQLW------LSLGFDNINFFMEQSVSSW 114
Query: 209 IISKFQKEQIELFLMTAWAIWHAQNLLKFEHK 240
+ + + LF+ W IW A+NLL E +
Sbjct: 115 LRRGSESDNKSLFMSACWWIWRARNLLCMEDE 146
>IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26788772-26788104 H EGN_Mt090430 20090702
Length = 222
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFAR 61
W +G+G + ++ D W+ N +IL++ + LI + W+ ++++ +F
Sbjct: 60 WKIGNGESAKVWGDNWVPLHNGFKILTQKMEPFSIRHVKDLINMDSFSWDTEILNNLFLP 119
Query: 62 EEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHE--DSLSQSYASSFVPVSTA 119
+ I I + N D + G Y V+SGY + E D S ASS +
Sbjct: 120 IDKDHIEQIPIINTTNIDEYMWMHEPTGVYTVKSGYKAIKEWQDQQFSSTASSSCD-TQV 178
Query: 120 WKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVV 160
WK+LW + +P+ K + R +N LP L RG+ ++
Sbjct: 179 WKKLWAIHTIPRHKVLLWRILQNSLPVRSELSNRGVPCSIL 219
>IMGA|Medtr2g056130.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 15253178-15253955 H
EGN_Mt090430 20090702
Length = 128
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 39 MSHLILQNPKQWNVDLISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYG 98
+ LI QN +NV+++ +F E + L D I K G+Y+VRS Y
Sbjct: 11 LDSLIDQNNHGYNVEVVEQMFDPEVREPHTYYPLIQSVYKDKLIWKAEKDGQYLVRSSYR 70
Query: 99 LLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRG 154
L + S+ + W ++W+ + KV +FV R C+N LP L RG
Sbjct: 71 LCVNTIVDNSHLHK----PSGWNEIWKLEVPSKVNNFVWRVCRNCLPTWARLTYRG 122
>IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3
22005738-22006807 E EGN_Mt090430 20090702
Length = 168
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 21/177 (11%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
+W +G+G +I + D WL E+ ++ L+ + + WN +I+ IF
Sbjct: 10 RWRIGNGKSIAVWTDPWL---------------REDEKVADLM--SGESWNWGMIAGIFN 52
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
+ + I ++L R D I +++G Y VRS Y E + VS W
Sbjct: 53 DHDRKAISNLALLNRDGEDRIIWKFNRYGNYTVRSAYRYAMETLVDNVEYR----VSGEW 108
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKG 177
++W I ++K F+ RA + LP L + + C E H G
Sbjct: 109 LKMWSLKIPQRIKVFLWRAVRGALPTRMRLQDKVVPCTDCCPFCETNYENNWHVFMG 165
>IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
25622719-25621333 H EGN_Mt090430 20090702
Length = 441
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 86 SKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLP 145
+K+G Y +SGY L S + S P S +W +W+ ++ K+K F AC N +P
Sbjct: 134 NKNGTYTPKSGYSWLL--SRKELVIISNPPPSCSW--IWKLHMPEKIKLFFWLACHNSVP 189
Query: 146 AADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSFM-- 203
L R + V CGL E +H ++ C + +W Q + F+
Sbjct: 190 TLSMLNHRNIAPSPVCSRCGLHDETFLHCVRDCAHSKSIW------------QRIGFIHN 237
Query: 204 EWFATIISK--FQKEQIE----LFLMTAWAIWHAQNLLKFEHKR 241
++F+T ++ + + F T W W +N++ E++
Sbjct: 238 DFFSTSVTHEWLKNNSVGHLSFTFAATIWWAWRNRNMMCLENEN 281
>IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related
chr08_pseudomolecule_IMGAG_V3 30299266-30298795 H
EGN_Mt090430 20090702
Length = 120
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 54 LISAIFAREEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSF 113
LI IF+ E +IL I L R SD R+ ++G + VRS + L+ + + +S
Sbjct: 17 LIKEIFSEFEANQILNIPLSWRLPSDKRVWHWERNGNFSVRSAHHLIKDVDARNTLEASS 76
Query: 114 VPVSTAWKQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGM 155
WK +W+ VK+F+ R ++ LPA L ++G+
Sbjct: 77 TNGQEIWKAVWRIKAPHSVKNFLRRLTRDILPARCRLKRKGL 118
>IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse
transcriptase); Hemopexin; Polynucleotidyl transferase,
Ribonuclease H fold chr02_pseudomolecule_IMGAG_V3
27457173-27452820 H EGN_Mt090430 20090702
Length = 1147
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 1 QWIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFA 60
QW +GDGST AT+SHLI + WN LI F
Sbjct: 745 QWRIGDGST--------------------------TATVSHLIDAQTRSWNEPLIRNNFN 778
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW 120
++ +IL I L +D I K G Y V++ Y + + +++ V
Sbjct: 779 LRDVDEILKIPLLHCEQNDAIIWRFDKKGVYSVKNAYRVCVDVLINRDEWK----VEGDR 834
Query: 121 KQLWQQNILPKVKHFVHRACKNHLPAADSLVQRGM 155
+LW I PKVKHF+ R ++ LP L +G+
Sbjct: 835 NKLWSLPIPPKVKHFMWRLGRDCLPNRQRLNCKGV 869
>IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
31944726-31943241 H EGN_Mt090430 20090702
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATM-SHLILQNPKQWNVDLISAIFA 60
W +G+G +I+I +D W+ N + +S P I N N + L LQ+ W+ DLI F
Sbjct: 83 WRIGNGHSIKIWEDNWIPSNNDFKTIS-PNIGNPNIQLVKDLFLQDGSGWDTDLIKNNFL 141
Query: 61 REEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLLH 101
+ I I + +D + ++G Y V++GY +L
Sbjct: 142 HIDRDNITQIPIINTSKNDEYMWMHEQNGVYSVKNGYQILQ 182
>IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
3397609-3394716 E EGN_Mt090430 20090702
Length = 703
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 5/138 (3%)
Query: 2 WIVGDGSTIRI*KDKWLADTNQHRILSRPTISNENATMSHLILQNPKQWNVDLISAIFAR 61
W +G+GS + + +D W+ N +I + S+ + L++++P+ W+ ++ F
Sbjct: 563 WKIGNGSQVNVWEDNWIPQHNGFKIYTPGANSSSIRQVKELLVEDPRGWHQSILENHFLS 622
Query: 62 EEMRKILFISLGLRRNSDVRI*PLSKHGKYIVRSGYGLL---HEDSLSQSYASSFVPVST 118
E +I + L D + S+ G Y V+SGY + H +SL S+
Sbjct: 623 FESERIQQLPLVQEVLEDSYMWMYSQDGNYTVKSGYNFIKEWHYNSLPG--PSNNNNNQR 680
Query: 119 AWKQLWQQNILPKVKHFV 136
WK W + +P+ K +
Sbjct: 681 IWKASWNLDTIPRHKDLL 698
>IMGA|Medtr3g080050.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
18725780-18724244 H EGN_Mt090430 20090702
Length = 377
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 84 PLSKHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAW-KQLWQQNILPKVKHFVHRACKN 142
PL K G++ + Y L S Q+ T+W K +W + P + R +
Sbjct: 5 PLLKKGRFQNLTKYNLSSSGSHCQN---------TSWGKVIWNPYVPPSKFLLIWRLFHH 55
Query: 143 HLPAADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWKYSHLRLTTSKCQALSF 202
LP ++L+ RG+ V +C E H GC +W + L + ++S
Sbjct: 56 RLPTDENLLSRGLYFPSVCNLCCKEPETSKHLFFGCTFASCIWSW--LASVINCNVSISS 113
Query: 203 MEWFATIISKFQKEQIELFLMTAW-----AIWHAQNLLKFEHKR 241
+E T+++K Q ++ L++A AIW A+N ++F + +
Sbjct: 114 IEDLNTLLNKQCSLQCKVVLISAVIHSVNAIWFARNQIRFNNTK 157
>IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
29296065-29298854 H EGN_Mt090430 20090702
Length = 693
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 87 KHGKYIVRSGYGLLHEDSLSQSYASSFVPVSTAWKQLWQQNILPKVKHFVHRACKNHLPA 146
K+G Y VRS Y + +++ +S + V W +W+ PK+++FV C+ P
Sbjct: 463 KNGSYSVRSAYRIY----VTKIADNSHLHVPGKWSSIWKLKFPPKIRNFVWPVCRGCFPT 518
Query: 147 ADSLVQRGMLIDVVGEVCGLRIERVIHALKGCILGEQVWK 186
L RG+ +CG E IH L QVW+
Sbjct: 519 RARLSSRGIHCPNDFVLCGTNYEDSIHVLLEYPGAMQVWR 558