Jatropha Genome Database

JcCB0091711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0091711.10 - phase: 0 /partial
         (259 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g036470.1 Sterol desaturase chr05_pseudomolecule_IMGA...   481   e-136
IMGA|Medtr8g073640.1 Sterol desaturase chr08_pseudomolecule_IMGA...   477   e-135
IMGA|Medtr5g036470.2 Sterol desaturase chr05_pseudomolecule_IMGA...   397   e-111
IMGA|Medtr8g106630.1 Sterol desaturase chr08_pseudomolecule_IMGA...   212   1e-55
IMGA|Medtr2g071090.1 hypothetical protein chr02_pseudomolecule_I...    84   5e-17
IMGA|Medtr4g025590.1 Cyclin-like F-box; Agenet chr04_pseudomolec...    83   1e-16
IMGA|Medtr5g036070.1 E1-E2 ATPase-associated region chr05_pseudo...    73   1e-13
IMGA|Medtr5g043740.1 Sterol desaturase chr05_pseudomolecule_IMGA...    64   8e-11

>IMGA|Medtr5g036470.1 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 15194182-15197805 F
           EGN_Mt090430 20090702
          Length = 271

 Score =  481 bits (1239), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 226/258 (87%), Positives = 244/258 (94%)

Query: 1   YLITHFSDFQLACLGSFFLHESVFFLSGLPFIYLERAGWLSKYKIQTKNNSPAAQEKCIT 60
           YLITHFSDFQLACLGSFFLHESVFFLSGLPF+++ERAGWLSKYKIQ KNNSP AQ+KCI 
Sbjct: 11  YLITHFSDFQLACLGSFFLHESVFFLSGLPFVWIERAGWLSKYKIQAKNNSPEAQDKCIV 70

Query: 61  RLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIFYFILEDFVFYWGHRIL 120
           RLLLYHFGVNLPVM+FSYPVFRYMGM+S LPLPSW ++LTQI+FYFILEDF+FYWGHRIL
Sbjct: 71  RLLLYHFGVNLPVMIFSYPVFRYMGMQSSLPLPSWNIILTQIMFYFILEDFIFYWGHRIL 130

Query: 121 HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWMMLR 180
           HTKWLYKH+HSVHHEYATPFGLTSEYAHPAEILFLGFATI+GPAITGPHLITLWLWM++R
Sbjct: 131 HTKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITLWLWMVVR 190

Query: 181 VLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTDKG 240
           VLETVEAHCGYHFPWS SNF+PLYGG+DFHDYHHRLLYTKSGNYSSTF YMD IFGTD G
Sbjct: 191 VLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDRIFGTDVG 250

Query: 241 YRKLKALKTDGVEDGSKQ 258
           YRKLKALK+   ED  +Q
Sbjct: 251 YRKLKALKSREFEDSYEQ 268


>IMGA|Medtr8g073640.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 14429368-14432468 E
           EGN_Mt090430 20090702
          Length = 271

 Score =  477 bits (1227), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/258 (88%), Positives = 243/258 (94%)

Query: 1   YLITHFSDFQLACLGSFFLHESVFFLSGLPFIYLERAGWLSKYKIQTKNNSPAAQEKCIT 60
           YLIT+FSDFQLACLGSFFLHESVFFLSGLPFI+LERAGWLSKYKIQ K NS  ++E+CI 
Sbjct: 11  YLITNFSDFQLACLGSFFLHESVFFLSGLPFIWLERAGWLSKYKIQAKTNSRESEERCII 70

Query: 61  RLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIFYFILEDFVFYWGHRIL 120
           RLL+YHFGVNLPVM+FSYPVF+YMGM+S LPLPSW+VVLTQIIFYFILEDFVFYWGHRIL
Sbjct: 71  RLLVYHFGVNLPVMIFSYPVFKYMGMQSSLPLPSWRVVLTQIIFYFILEDFVFYWGHRIL 130

Query: 121 HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWMMLR 180
           HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATI+GPAITGPHLITLWLWM+LR
Sbjct: 131 HTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPAITGPHLITLWLWMVLR 190

Query: 181 VLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTDKG 240
           VLETVEAHCGYHFPWS SNF+PLYGG+DFHDYHHRLLYTKSGNYSSTF YMD IFGTD G
Sbjct: 191 VLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNYSSTFTYMDRIFGTDIG 250

Query: 241 YRKLKALKTDGVEDGSKQ 258
           YRKLKALK   VE  S+Q
Sbjct: 251 YRKLKALKNAEVEYSSEQ 268


>IMGA|Medtr5g036470.2 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 15196033-15197805 F
           EGN_Mt090430 20090702
          Length = 217

 Score =  397 bits (1019), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/214 (85%), Positives = 200/214 (93%)

Query: 45  IQTKNNSPAAQEKCITRLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIF 104
           +Q KNNSP AQ+KCI RLLLYHFGVNLPVM+FSYPVFRYMGM+S LPLPSW ++LTQI+F
Sbjct: 1   MQAKNNSPEAQDKCIVRLLLYHFGVNLPVMIFSYPVFRYMGMQSSLPLPSWNIILTQIMF 60

Query: 105 YFILEDFVFYWGHRILHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPA 164
           YFILEDF+FYWGHRILHTKWLYKH+HSVHHEYATPFGLTSEYAHPAEILFLGFATI+GPA
Sbjct: 61  YFILEDFIFYWGHRILHTKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGPA 120

Query: 165 ITGPHLITLWLWMMLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNY 224
           ITGPHLITLWLWM++RVLETVEAHCGYHFPWS SNF+PLYGG+DFHDYHHRLLYTKSGNY
Sbjct: 121 ITGPHLITLWLWMVVRVLETVEAHCGYHFPWSPSNFLPLYGGSDFHDYHHRLLYTKSGNY 180

Query: 225 SSTFIYMDWIFGTDKGYRKLKALKTDGVEDGSKQ 258
           SSTF YMD IFGTD GYRKLKALK+   ED  +Q
Sbjct: 181 SSTFTYMDRIFGTDVGYRKLKALKSREFEDSYEQ 214


>IMGA|Medtr8g106630.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 23972783-23976296 E
           EGN_Mt090430 20090702
          Length = 303

 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 113/261 (43%), Positives = 154/261 (59%), Gaps = 11/261 (4%)

Query: 7   SDFQLACLGSFFLHESVFFLSGLPFIYLE--RAGWLSKYKIQTKNN-SPAAQEKCITRLL 63
           SD+ L C    FL   +F L  LP ++LE  R     +YKIQ K   S      C   +L
Sbjct: 33  SDYFLFCHNILFLF-LIFSLVPLPLVFLEIKRLYPFDEYKIQPKVRLSLHEMLNCYKDVL 91

Query: 64  LYHFGVNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIFYFILEDFVFYWGHRILHTK 123
              F V  P+ L SYP  + +G+R+ LPLPS   +L+Q++ YF++ED+  YW HR LH K
Sbjct: 92  KMFFLVVGPLQLISYPSIKMIGIRTGLPLPSGFEILSQLLVYFLVEDYTNYWIHRFLHNK 151

Query: 124 WLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPAITGPHLITLWLWMMLRVLE 183
           W Y+ +H VHHEY  P G  + YAH AEIL LG  + +GPA+   H+IT WLW+ LR +E
Sbjct: 152 WGYEKIHRVHHEYQAPIGFAAPYAHWAEILILGIPSFLGPAMVPGHMITFWLWIALRQVE 211

Query: 184 TVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTKSGNYSSTFIYMDWIFGTDKGYR- 242
            ++ H GY FPW+ + +IP YGGA+ HDYHH +      N++S F Y D+I+GTDKG+R 
Sbjct: 212 AIDTHSGYDFPWNPTKYIPFYGGAEHHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGFRY 271

Query: 243 ------KLKALKTDGVEDGSK 257
                 KLK   T+G     +
Sbjct: 272 QKKILQKLKEDSTNGAAQNGR 292


>IMGA|Medtr2g071090.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 16238220-16239227 E
           EGN_Mt090430 20090702
          Length = 101

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/46 (89%), Positives = 42/46 (91%)

Query: 1   YLITHFSDFQLACLGSFFLHESVFFLSGLPFIYLERAGWLSKYKIQ 46
           YLIT FSDFQLACLGSFFLHESVFFL GLPFI+ ERA WLSKYKIQ
Sbjct: 56  YLITKFSDFQLACLGSFFLHESVFFLFGLPFIWFERAEWLSKYKIQ 101


>IMGA|Medtr4g025590.1 Cyclin-like F-box; Agenet
           chr04_pseudomolecule_IMGAG_V3 6140181-6133675 H
           EGN_Mt090430 20090702
          Length = 955

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/46 (84%), Positives = 43/46 (93%)

Query: 1   YLITHFSDFQLACLGSFFLHESVFFLSGLPFIYLERAGWLSKYKIQ 46
           YLIT+FSDFQLACLGSFFLH+SVFFL GLPFI+ ERA WLSKYKI+
Sbjct: 910 YLITNFSDFQLACLGSFFLHKSVFFLFGLPFIWFERAEWLSKYKIR 955


>IMGA|Medtr5g036070.1 E1-E2 ATPase-associated region
           chr05_pseudomolecule_IMGAG_V3 15043342-15039939 E
           EGN_Mt090430 20090702
          Length = 238

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 11/85 (12%)

Query: 14  LGSFFLHESVFFLSGLPFIYLERAGWLSKYKIQTKNNSPAAQEKCITRLLLYHFGVNLPV 73
           LG  FL      L G P     +A          K NSP +++ CI RLL+YH   NLP+
Sbjct: 154 LGRLFLKSRRMELYGKPI----KAS-------DAKTNSPESEDICIIRLLVYHLESNLPL 202

Query: 74  MLFSYPVFRYMGMRSDLPLPSWKVV 98
           M+FSYPVF+ MGM+S LPL SW V+
Sbjct: 203 MIFSYPVFKCMGMQSSLPLSSWLVL 227


>IMGA|Medtr5g043740.1 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 18106400-18108754 F
           EGN_Mt090430 20090702
          Length = 263

 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 12/214 (5%)

Query: 46  QTKNNSPAAQEKCITRLLLYHFGVNLPVMLFSYPVFRYMGMRSDLPLPSWKVVLTQIIFY 105
           Q +++     +  + + +L    V   V    + V       S     S  V+  Q I  
Sbjct: 46  QDEDDKNLVSKFDVVKGVLLQQAVQAVVATLLFAVTGSDSQSSTNENTSLLVLARQFITA 105

Query: 106 FILEDFVFYWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATIIGPA 164
            ++ D   Y+ HR +H  K+LYKH+HS+HH    P+   + Y HP E L L     IG A
Sbjct: 106 MLVMDTWQYFMHRYMHQNKFLYKHIHSLHHRLIVPYSFGALYNHPIEGLLL---DTIGGA 162

Query: 165 ----ITGPHLITLWLWMMLRVLETVEAHCGYHFPWSLSNFIPLYGGADFHDYHHRLLYTK 220
               ++G        +     ++TV+ HCG   P +L +       + +HD HH+ LY  
Sbjct: 163 LSFLLSGMSPRASIFFFSFATIKTVDDHCGLWLPGNLFHMF-FNNNSAYHDVHHQ-LYGN 220

Query: 221 SGNYSSTFIYM-DWIFGTDKGYRKLKALKTDGVE 253
             N+S  F  M D I GT   Y  L+   + G E
Sbjct: 221 KYNFSQPFFVMWDKILGTHMPY-SLEKRASGGFE 253