Jatropha Genome Database

JcCB0090461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0090461.10 - phase: 0 
         (465 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g010560.1 Cystathionine beta-lyase, related chr07_pse...   201   8e-52
IMGA|Medtr6g013230.1 Cys/Met metabolism pyridoxal-phosphate-depe...   199   3e-51
IMGA|Medtr3g109370.1 Cys/Met metabolism pyridoxal-phosphate-depe...   119   3e-27
IMGA|AC148471_23.1 O-acetylhomoserine/O-acetylserine sulfhydryla...    87   2e-17

>IMGA|Medtr7g010560.1 Cystathionine beta-lyase, related
           chr07_pseudomolecule_IMGAG_V3 2308691-2313997 F
           EGN_Mt090430 20090702
          Length = 535

 Score =  201 bits (510), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 195/369 (52%), Gaps = 12/369 (3%)

Query: 103 NAMSTPLYQTAT--FKQPSALGD------GPYDYTRHGNPTRAALESXXXXXXXXXXXXC 154
           + ++TP+  T+   FK+ + L D        Y+Y R+GNPT   LE              
Sbjct: 165 DGITTPVVNTSAYFFKKTADLIDFKEKRQTSYEYGRYGNPTSTVLEEKISELEGAESTIL 224

Query: 155 FSSGM-AALAAATHLVGTGEEIVAGDDLYGGSDRLLSQVSPKSGIVVKRVNTTNLDEVAS 213
            +SGM A++     LV  G  +V   D Y  +   +  V PK GI    V+  ++  + S
Sbjct: 225 MASGMCASIVLLMALVPAGGHLVTTTDCYRKTRIFIETVLPKMGITTSVVDPADVGALQS 284

Query: 214 AIGP-WTKLVWLESPTNPRQQISDIRKIAKMAHEQGALVLVDNSIMSPVLVQPLELGADI 272
           A+      L + ESPTNP  +  DI+ ++++ H+ GAL+++D +  +P+  + L LGAD+
Sbjct: 285 ALEQNKVSLFFTESPTNPFLRCVDIKLVSELCHKNGALLVIDGTFATPLNQKALALGADL 344

Query: 273 AMQSATKFISGQSDVMAGVLSVRGESLARDLYFLQNSEGSGLAPFDCWICLRGVKTMALR 332
            M S TK+I G  DV+ G +S     L  ++  L +  G  L P   ++ +RG+KT+ LR
Sbjct: 345 VMHSCTKYIGGHHDVLGGCIS-GSLKLISEIRILHHILGGALNPNAAYLFIRGMKTLHLR 403

Query: 333 VEKQQENAQKIAEFLASHPRVEKVNYAGLSGHPGRDLHYSQAKGAGSVLSF-LTGSMPLS 391
           V++Q     ++A+ L +HP+V++V Y GL  HP  +L   Q  G G V+SF + G +  +
Sbjct: 404 VQQQNSTGMRMAKLLEAHPKVKRVYYPGLPSHPEHELAMRQMTGFGGVVSFEIDGDITTT 463

Query: 392 KHVVEATKYFSITVSFGSVKSLISMPCFMSHATIPAEVRQARGLAEDLVRISVGIEDVND 451
              +++ K   I  SFG  +S++  P  +S+  +PA  R    + ++LVR S GIED  D
Sbjct: 464 IKFIDSLKIPYIAASFGGCESIVDQPAILSYWDLPASERAKWKIYDNLVRFSFGIEDFED 523

Query: 452 LIADLDHAL 460
           L AD+  AL
Sbjct: 524 LKADVLQAL 532


>IMGA|Medtr6g013230.1 Cys/Met metabolism
           pyridoxal-phosphate-dependent enzymes; ;
           chr06_pseudomolecule_IMGAG_V3 2746264-2752471 E
           EGN_Mt090430 20090702
          Length = 477

 Score =  199 bits (505), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 199/372 (53%), Gaps = 16/372 (4%)

Query: 103 NAMSTPLYQTAT--FKQPSALGDGP------YDYTRHGNPTRAALESXXXXXXXXXXXXC 154
           +A++TP+  T+   FK+ + L D        Y+Y R+GNPT A LE              
Sbjct: 107 DAITTPVVNTSVYFFKKTADLIDWKEKRQFSYEYGRYGNPTTAVLEEKMSALEGAESTLF 166

Query: 155 FSSGMAALAAA-THLVGTGEEIVAGDDLYGGSDRLLSQVSPKSGIVVKRVNTTNLDEVAS 213
            +SGM   +     LV  G  IV   D Y  +   ++ + PK GI    ++  ++D + +
Sbjct: 167 LASGMCTSSVMFLALVPAGGHIVTTTDCYRRTRIFIANMLPKMGITATIIDPADVDALEA 226

Query: 214 AI-GPWTKLVWLESPTNPRQQISDIRKIAKMAHEQGALVLVDNSIMSPVLVQPLELGADI 272
           A+      L + E+PTNP Q+  DI+ ++++ H +GALV +D +  +P+  + L LGAD+
Sbjct: 227 ALENNKVSLFFTETPTNPFQRCVDIKLVSELCHRKGALVCIDGTFSTPINQKALSLGADL 286

Query: 273 AMQSATKFISGQSDVMAGVLSVRGE--SLARDLYFLQNSEGSGLAPFDCWICLRGVKTMA 330
            + SATK+I+G  DV+AG +S   +  S  R  +F+    G  L+P   ++ +RG+KT+ 
Sbjct: 287 VVNSATKYIAGHHDVLAGCISGSEKLISQVRSFHFIL---GGTLSPNSAYLVIRGMKTLH 343

Query: 331 LRVEKQQENAQKIAEFLASHPRVEKVNYAGLSGHPGRDLHYSQAKGAGSVLSF-LTGSMP 389
           LRV+ Q   A K+A+ L +HP+V +V Y GL  HP   L   Q  G G V+ F + G + 
Sbjct: 344 LRVQHQNSTAMKMAQLLETHPKVTRVYYPGLPSHPEYALAKRQMTGFGGVVCFDIDGDIM 403

Query: 390 LSKHVVEATKYFSITVSFGSVKSLISMPCFMSHATIPAEVRQARGLAEDLVRISVGIEDV 449
            +   V++ K   I  SFG V+S+++ P  MS+  +P + R+   + ++ VR   G+E  
Sbjct: 404 RTIKFVDSLKIPYIAPSFGGVESVVNQPAIMSYWDLPRKEREKYRIYDNTVRFCFGVEGY 463

Query: 450 NDLIADLDHALN 461
            DL  D+  AL+
Sbjct: 464 EDLKDDVLQALD 475


>IMGA|Medtr3g109370.1 Cys/Met metabolism
           pyridoxal-phosphate-dependent enzymes; ;
           chr03_pseudomolecule_IMGAG_V3 27390951-27393346 E
           EGN_Mt090430 20090702
          Length = 443

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 39/384 (10%)

Query: 92  LMNFENKFDPYNAMSTPLYQTATFK--QPSAL-----------GDGPYDYTRHGNPTRAA 138
           L N  ++F  +  ++  +  +ATF   +P  L           GD  Y Y+RH NPT   
Sbjct: 46  LANARHEFGEHGGVNMSIEASATFTVMEPDTLRKIFAGELGHEGD-YYVYSRHFNPTVLN 104

Query: 139 LESXXXXXXXXXXXXCFSSGMAALAAAT-HLVGTGEEIVAGDDLYGGSDRLLSQVSPKS- 196
           L              C +SGM+A++A    L   G  +VA   LYGG+  LL     ++ 
Sbjct: 105 LSRKMAALEGTEAAYCTASGMSAISAVLLQLCSHGGHVVASSTLYGGTHALLQHFFVRTC 164

Query: 197 GIVVKRVNTTNLDEVASAIGPW-TKLVWLESPTNPRQQISDIRKIAKMAHEQGALVLVDN 255
            I    V+ ++L+ V +AI    TK+++ ES  NP   +++  ++A++AH++G  V+VDN
Sbjct: 165 NITTTFVDISDLEAVENAIVEGKTKVLYFESIANPSLNVANTPELARIAHKKGVTVVVDN 224

Query: 256 SIMSPVLVQPLELGADIAMQSATKFISGQSDVMAGVLSVRGESLARDLYFLQNSE---GS 312
           +  +P+L+ P  LGAD+ + S +KFISG  D++AG +     S    L  +Q +    G 
Sbjct: 225 TF-APMLLSPARLGADVVVHSISKFISGGGDIIAGAV-CGSASFVNALMGIQGAMMLLGP 282

Query: 313 GLAPFDCWICLRGVKTMALRVEKQQENAQKIAEFLASHPRVEK----VNYAGLSGHPGRD 368
            + P   +     +  + LR+++    A + A       R++K    V Y GL  HP  +
Sbjct: 283 TMNPKVAFELSERIPHLGLRMKEHSHRALEFA------TRLKKLGLNVIYPGLEDHPQHE 336

Query: 369 LHYS---QAKGAGSVLSFLTGSMPLSKHVVEATKYFS----ITVSFGSVKSLISMPCFMS 421
           L  S   ++ G G +L    G++  +   +   + ++    + VS G  ++L+S     +
Sbjct: 337 LLKSIGNKSYGYGGILCVDMGTVEKANKFMSYLQNYAHFGFMAVSLGYYETLMSCSGSST 396

Query: 422 HATIPAEVRQARGLAEDLVRISVG 445
            + +  E ++  G+   +VR+SVG
Sbjct: 397 SSELNEEEQKLAGITPGMVRMSVG 420


>IMGA|AC148471_23.1 O-acetylhomoserine/O-acetylserine sulfhydrylase;
           AC148471.15 39854-40783 H EGN_Mt090430 20090702
          Length = 309

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 47/298 (15%)

Query: 88  ISTILMNFENKFDPY-NAMSTPLYQTATF--------KQPSALGDGPYDYTRHGNPTRAA 138
           + T+ ++  ++ DP  NA + P+Y+T+++            AL +    YTR  NPT   
Sbjct: 3   LETLCLHGGSQPDPTTNARAVPIYRTSSYVFRNAEHAANLFALRELGNIYTRLMNPTTDV 62

Query: 139 LESXXXXXXXXXXXXCF--SSGMAAL-AAATHLVGTGEEIVAGDDLYGGSDRLLSQVSPK 195
           LE                 +SG +A+  +  +L   G+ IV+  +LYGG+      + P 
Sbjct: 63  LEKRVALLEGAPELGGLGVASGTSAIFYSIINLAQAGDNIVSARNLYGGTYTQFHDILPT 122

Query: 196 SGIVVKRVNTTNLDEVASAIGPWTKLVWLESPTNPRQQISDIRKIAKMAHEQGALVLVDN 255
            G+ VK V++ +    A AI   T+ ++ E+ +NP  +I+D+  I+K+AH  G  ++VD+
Sbjct: 123 LGVTVKFVDSNDPKNFADAIDDKTRALFCETVSNPAVEIADLDAISKVAHGHGLPLVVDS 182

Query: 256 SIMSPVLVQPLELGADIAMQSATKFI-------------SGQSDVMAGV--------LSV 294
           +  +P L QPL  GAD+ + S TK+              SG+ +   G          S 
Sbjct: 183 TFSTPYLTQPLAHGADVVVHSLTKWFGGHGTGIGGVVVDSGRFNWAGGKHPLYTTPDTSY 242

Query: 295 RGESLARDL--------YFLQ------NSEGSGLAPFDCWICLRGVKTMALRVEKQQE 338
            G     DL        Y L+       + G+ ++P   W+ L+G++T    +E+  E
Sbjct: 243 HGLRWGVDLPDPLRPLAYILRMRTVPLRNLGACISPDTSWMFLQGIETSRFALERHCE 300